mRNA_M-pyrifera_M_contig104431.944.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig104431.944.1
Unique NamemRNA_M-pyrifera_M_contig104431.944.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig104431.944.1 vs. uniprot
Match: UPI000719D86A (p53 and DNA damage-regulated protein 1-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719D86A)

HSP 1 Score: 64.3 bits (155), Expect = 4.030e-11
Identity = 36/83 (43.37%), Postives = 55/83 (66.27%), Query Frame = 1
Query:    1 QMVDYDRKRQKNREALNALKKRSAADVEERQKGVWVFTGSMFMKLPKEAAKKGLEKDQEQLSAEIDRMQAVVKDKAIRLQRMD 249
            Q+V+ DRK+ KNREA+ +LK   +     +++  WV  G+MF+K+P   AK+ LE+DQEQL  EID ++A +K K  RL  ++
Sbjct:   37 QLVNLDRKKNKNREAIRSLKTVPSTSTSTKEQKAWVCFGNMFLKIPLTKAKQVLEEDQEQLDREIDSLRANLKAKVNRLNELE 119          
BLAST of mRNA_M-pyrifera_M_contig104431.944.1 vs. uniprot
Match: A0A433QQ04_9FUNG (p53 and DNA damage-regulated protein 1 n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QQ04_9FUNG)

HSP 1 Score: 65.1 bits (157), Expect = 1.220e-10
Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 1
Query:    1 QMVDYDRKRQKNREALNALKKRSAADVEERQKGVWVFTGSMFMKLPKEAAKKGLEKDQEQLSAEIDRMQAVVKDKAIRLQRMD 249
            Q++DYDRKR  NREAL+ +K + A D +     +WV  G MF+KLPKE  +  ++KDQ+ L  EI  ++  +KDKA  L+R++
Sbjct:  164 QVIDYDRKRNSNREALHQMKNKLAKDSK-----LWVNIGDMFIKLPKENTRTMIQKDQQNLDKEISTLRDKLKDKAQELERIE 241          
BLAST of mRNA_M-pyrifera_M_contig104431.944.1 vs. uniprot
Match: A0A1C7NGR7_9FUNG (p53 and DNA damage-regulated protein 1 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NGR7_9FUNG)

HSP 1 Score: 62.0 bits (149), Expect = 2.000e-10
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 1
Query:    4 MVDYDRKRQKNREALNALKKRSAADVEERQKGVWVFTGSMFMKLPKEAAKKGLEKDQEQLSAEIDRMQAVVKDKAIRLQRMD 249
            ++DYDRKR  NREALN LKK        +    W F G MF+KLP +  K  L+KDQ+ L  +ID  + V+K  A+ +QR++
Sbjct:   31 VIDYDRKRNSNREALNQLKKT-------KDDKAWTFFGDMFIKLPTDNVKTMLQKDQKALDEKIDEARKVMKQNALAIQRIE 105          
BLAST of mRNA_M-pyrifera_M_contig104431.944.1 vs. uniprot
Match: A0A1X2IES1_9FUNG (p53 and DNA damage-regulated protein 1 n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IES1_9FUNG)

HSP 1 Score: 62.0 bits (149), Expect = 2.000e-10
Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 1
Query:    4 MVDYDRKRQKNREALNALKKRSAADVEERQKGVWVFTGSMFMKLPKEAAKKGLEKDQEQLSAEIDRMQAVVKDKAIRLQRMD 249
            +VDYDRKR  NRE+LN LKK    +     K VWV  G MFM+LP + A++ +E+DQ  L+++ID  + V+KD    L R++
Sbjct:   29 VVDYDRKRNSNRESLNQLKKNLKDE-----KKVWVNFGDMFMRLPTKEAQEVIEQDQTTLTSKIDDTRKVIKDSLTELNRLE 105          
BLAST of mRNA_M-pyrifera_M_contig104431.944.1 vs. uniprot
Match: A0A1Y2GT99_9FUNG (p53 and DNA damage-regulated protein 1 n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GT99_9FUNG)

HSP 1 Score: 60.5 bits (145), Expect = 6.690e-10
Identity = 33/82 (40.24%), Postives = 55/82 (67.07%), Query Frame = 1
Query:    4 MVDYDRKRQKNREALNALKKRSAADVEERQKGVWVFTGSMFMKLPKEAAKKGLEKDQEQLSAEIDRMQAVVKDKAIRLQRMD 249
            +VDYDR+R  NREAL+ LKK  +++     K VWV  G +F+K+PK+  +  + KDQE L +EI  ++  +K+K + L++++
Sbjct:   24 IVDYDRRRNSNREALSKLKKELSSE-----KKVWVNLGDLFVKMPKQNIETMIRKDQETLDSEITDIREAMKEKVVELEKLE 100          
BLAST of mRNA_M-pyrifera_M_contig104431.944.1 vs. uniprot
Match: A0A168T1Q2_ABSGL (p53 and DNA damage-regulated protein 1 n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168T1Q2_ABSGL)

HSP 1 Score: 62.8 bits (151), Expect = 9.090e-10
Identity = 35/82 (42.68%), Postives = 55/82 (67.07%), Query Frame = 1
Query:    4 MVDYDRKRQKNREALNALKKRSAADVEERQKGVWVFTGSMFMKLPKEAAKKGLEKDQEQLSAEIDRMQAVVKDKAIRLQRMD 249
            ++DYDRKR  NRE+LN LKK    +     K VW+  G MF++LP + A++ +E+DQ+ L+ +ID  + VVKD  + L+R++
Sbjct:   29 LIDYDRKRNSNRESLNQLKKNLKDE-----KKVWLNFGDMFIRLPTDEAQQVIERDQKTLTEKIDETRKVVKDNMMELERLE 105          
BLAST of mRNA_M-pyrifera_M_contig104431.944.1 vs. uniprot
Match: A0A8H7RGQ7_9FUNG (p53 and DNA damage-regulated protein 1 n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7RGQ7_9FUNG)

HSP 1 Score: 60.1 bits (144), Expect = 1.150e-9
Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = 1
Query:    4 MVDYDRKRQKNREALNALKKRSAADVEERQKGVWVFTGSMFMKLPKEAAKKGLEKDQEQLSAEIDRMQAVVKDKAIRLQRMD 249
            ++DYDRKR  NREAL+ LK         + K  W F G MF+KLP E  K  +EKDQ+ L  ++D  + ++K  AI +Q+M+
Sbjct:   30 IIDYDRKRNSNREALSNLKNT-------KDKKSWTFFGDMFIKLPTEKTKALIEKDQKLLDEKVDESRDIMKQNAIAIQQME 104          
BLAST of mRNA_M-pyrifera_M_contig104431.944.1 vs. uniprot
Match: A0A293LBQ8_ORNER (p53 and DNA damage-regulated protein 1 (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LBQ8_ORNER)

HSP 1 Score: 60.1 bits (144), Expect = 1.280e-9
Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 1
Query:    1 QMVDYDRKRQKNREALNALKKRSAADVEERQKGVWVFTGSMFMKLPKEAAKKGLEKDQEQLSAEIDRMQAVVKDKAIRLQRMD 249
            Q+VD D+KRQKNREAL AL+K  A DV+ R    W+  G+MFMKLPK+  K  LEK+Q  L  EI  ++  +K     L+ M+
Sbjct:   28 QVVDLDKKRQKNREALRALQK--AGDVKGRP---WICIGNMFMKLPKDYTKDLLEKEQATLETEIQNLRKKMKKNVQLLREME 105          
BLAST of mRNA_M-pyrifera_M_contig104431.944.1 vs. uniprot
Match: A0A197KIC3_9FUNG (p53 and DNA damage-regulated protein 1 n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197KIC3_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 1.930e-9
Identity = 34/82 (41.46%), Postives = 53/82 (64.63%), Query Frame = 1
Query:    4 MVDYDRKRQKNREALNALKKRSAADVEERQKGVWVFTGSMFMKLPKEAAKKGLEKDQEQLSAEIDRMQAVVKDKAIRLQRMD 249
            +VDYDR+R  NREAL+ LKK  +     ++K VWV  G MF+K+PKE  +  ++KDQ  L  EI  ++  +K K + L++++
Sbjct:   26 IVDYDRRRNSNREALSKLKKELS-----QEKKVWVNLGDMFVKMPKENVETMIKKDQTTLDEEISDIRETMKQKVVELEQLE 102          
BLAST of mRNA_M-pyrifera_M_contig104431.944.1 vs. uniprot
Match: UPI001425B887 (p53 and DNA damage-regulated protein 1-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425B887)

HSP 1 Score: 58.9 bits (141), Expect = 3.670e-9
Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 1
Query:    1 QMVDYDRKRQKNREALNALKKRSAADVEERQKGVWVFTGSMFMKLPKEAAKKGLEKDQEQLSAEIDRMQAVVKDKAIRLQRMD 249
            Q+V+ D+KR KNREAL AL K    +  +++K VWV  G+MF+K+P    ++ L  DQ+QL   I+ ++  +K K  RL+ M+
Sbjct:   28 QVVELDKKRNKNREALRALAKMQPNEKSKKEKNVWVCFGNMFVKMPVTTTQQVLSDDQKQLDKGIEELRNGLKPKVARLRDME 110          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104431.944.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000719D86A4.030e-1143.37p53 and DNA damage-regulated protein 1-like n=1 Ta... [more]
A0A433QQ04_9FUNG1.220e-1044.58p53 and DNA damage-regulated protein 1 n=1 Tax=Jim... [more]
A0A1C7NGR7_9FUNG2.000e-1043.90p53 and DNA damage-regulated protein 1 n=1 Tax=Cho... [more]
A0A1X2IES1_9FUNG2.000e-1045.12p53 and DNA damage-regulated protein 1 n=1 Tax=Abs... [more]
A0A1Y2GT99_9FUNG6.690e-1040.24p53 and DNA damage-regulated protein 1 n=1 Tax=Lob... [more]
A0A168T1Q2_ABSGL9.090e-1042.68p53 and DNA damage-regulated protein 1 n=1 Tax=Abs... [more]
A0A8H7RGQ7_9FUNG1.150e-942.68p53 and DNA damage-regulated protein 1 n=1 Tax=Muc... [more]
A0A293LBQ8_ORNER1.280e-948.19p53 and DNA damage-regulated protein 1 (Fragment) ... [more]
A0A197KIC3_9FUNG1.930e-941.46p53 and DNA damage-regulated protein 1 n=1 Tax=Lin... [more]
UPI001425B8873.670e-940.96p53 and DNA damage-regulated protein 1-like n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104431contigM-pyrifera_M_contig104431:329..640 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score68.6
Seed ortholog evalue1.6e-09
Seed eggNOG ortholog78898.MVEG_02485T0
Hectar predicted targeting categoryother localisation
EggNOG OGs1GXZN@112252,2CGE7@1,2RUT1@2759,3951Q@33154,3Q2SB@4751
Best tax levelFungi incertae sedis
Best eggNOG OGNA|NA|NA
Exons2
Model size249
Cds size246
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104431.944.1prot_M-pyrifera_M_contig104431.944.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig104431 329..637 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815550.9714115-CDS-M-pyrifera_M_contig104431:328..4961622815550.9714115-CDS-M-pyrifera_M_contig104431:328..496Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104431 329..496 -
1692277459.7711773-CDS-M-pyrifera_M_contig104431:328..4961692277459.7711773-CDS-M-pyrifera_M_contig104431:328..496Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104431 329..496 -
1622815550.9840503-CDS-M-pyrifera_M_contig104431:559..6371622815550.9840503-CDS-M-pyrifera_M_contig104431:559..637Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104431 560..637 -
1692277459.781908-CDS-M-pyrifera_M_contig104431:559..6371692277459.781908-CDS-M-pyrifera_M_contig104431:559..637Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104431 560..637 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815550.9985871-UTR-M-pyrifera_M_contig104431:637..6401622815550.9985871-UTR-M-pyrifera_M_contig104431:637..640Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig104431 638..640 -
1692277459.7959669-UTR-M-pyrifera_M_contig104431:637..6401692277459.7959669-UTR-M-pyrifera_M_contig104431:637..640Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig104431 638..640 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig104431.944.1

>prot_M-pyrifera_M_contig104431.944.1 ID=prot_M-pyrifera_M_contig104431.944.1|Name=mRNA_M-pyrifera_M_contig104431.944.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp
MVDYDRKRQKNREALNALKKRSAADVEERQKGVWVFTGSMFMKLPKEAAK
KGLEKDQEQLSAEIDRMQAVVKDKAIRLQRMD
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mRNA from alignment at M-pyrifera_M_contig104431:329..640-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig104431.944.1 ID=mRNA_M-pyrifera_M_contig104431.944.1|Name=mRNA_M-pyrifera_M_contig104431.944.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=312bp|location=Sequence derived from alignment at M-pyrifera_M_contig104431:329..640- (Macrocystis pyrifera P11B4 male)
CAAATGGTGGACTACGACAGGAAGCGACAGAAGAACAGAGAGGCACTGAA TGCGCTAAAGAAGAGGAGTGCGGCAGACGTCGTCTCTGCGTCGCCAGCGC AGGCGGGAGGCGGGCCAGCGATCGAGGAGTTGGTGTCCGAGCAGGAGGAG CGGCAGAAGGGCGTCTGGGTGTTCACCGGCAGCATGTTCATGAAGCTGCC AAAGGAGGCGGCCAAGAAGGGCCTCGAGAAGGACCAGGAGCAGCTCTCTG CAGAGATCGACCGCATGCAGGCGGTGGTGAAGGACAAGGCCATTCGCCTG CAGCGAATGGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig104431:329..640-

>mRNA_M-pyrifera_M_contig104431.944.1 ID=mRNA_M-pyrifera_M_contig104431.944.1|Name=mRNA_M-pyrifera_M_contig104431.944.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig104431:329..640- (Macrocystis pyrifera P11B4 male)
ATGGTGGACTACGACAGGAAGCGACAGAAGAACAGAGAGGCACTGAATGC
GCTAAAGAAGAGGAGTGCGGCAGACGTCATGGTGGACTACGACAGGAAGC
GACAGAAGAACAGAGAGGCACTGAATGCGCTAAAGAAGAGGAGTGCGGCA
GACGTCGAGGAGCGGCAGAAGGGCGTCTGGGTGTTCACCGGCAGCATGTT
CATGAAGCTGCCAAAGGAGGCGGCCAAGAAGGGCCTCGAGAAGGACCAGG
AGCAGCTCTCTGCAGAGATCGACCGCATGCAGGCGGTGGTGAAGGACAAG
GCCATTCGCCTGCAGCGAATGGACGAGGAGCGGCAGAAGGGCGTCTGGGT
GTTCACCGGCAGCATGTTCATGAAGCTGCCAAAGGAGGCGGCCAAGAAGG
GCCTCGAGAAGGACCAGGAGCAGCTCTCTGCAGAGATCGACCGCATGCAG
GCGGTGGTGAAGGACAAGGCCATTCGCCTGCAGCGAATGGAC
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