mRNA_M-pyrifera_M_contig104386.942.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104386.942.1 vs. uniprot
Match: A0A2T7DV55_9POAL (Glutamate receptor n=6 Tax=Paniceae TaxID=147428 RepID=A0A2T7DV55_9POAL) HSP 1 Score: 83.2 bits (204), Expect = 1.580e-15 Identity = 54/153 (35.29%), Postives = 80/153 (52.29%), Query Frame = 1 Query: 46 FSPEEQFKHLSTRVVITVWLFVMLVATASFTASLASFLTVHHSQTVVNSIDD-VDSSTKIALLSGSFEEHYVLENLEIPPSVIVPTSTVDEILDLVADGTVDVGIAA----GPLLEEALAHAKPHCGLIIVGSEAAKTPWAFPMRPNLYFAND 489 FS + R V+ +WLFV+L+ +S+TASL S LTV T + IDD + S+ I +G F +Y++E L IP S +VP +T+ E D + G D G+AA P ++ L++ HC +VG E K W F + + A D Sbjct: 637 FSHRQNTVSALGRFVLIIWLFVVLIINSSYTASLTSILTVQQLATGITGIDDLISSALPIGYQAGKFTRNYLIEELNIPESRLVPLNTIQEYADALKRGPKDGGVAAIVDEMPYVDIFLSY---HCNFRVVGQEFTKEGWGFAFQRDSPLAAD 786
BLAST of mRNA_M-pyrifera_M_contig104386.942.1 vs. uniprot
Match: K3XV44_SETIT (Glutamate receptor n=12 Tax=Panicoideae TaxID=147369 RepID=K3XV44_SETIT) HSP 1 Score: 82.4 bits (202), Expect = 2.930e-15 Identity = 54/153 (35.29%), Postives = 79/153 (51.63%), Query Frame = 1 Query: 46 FSPEEQFKHLSTRVVITVWLFVMLVATASFTASLASFLTVHHSQTVVNSIDD-VDSSTKIALLSGSFEEHYVLENLEIPPSVIVPTSTVDEILDLVADGTVDVGIAA----GPLLEEALAHAKPHCGLIIVGSEAAKTPWAFPMRPNLYFAND 489 FS + R V+ +WLFV+L+ +S+TASL S LTV T + IDD + S+ I +G F +Y++E L IP S +VP +T+ E D + G D G+ A P ++ L++ HC IVG E K W F + + A D Sbjct: 636 FSHRQNTVSALGRFVLIIWLFVVLIINSSYTASLTSILTVQQLATGITGIDDLISSALPIGYQAGKFTRNYLIEELNIPESRLVPLNTIQEYADALKRGPKDGGVGAIVDETPYVQIFLSY---HCNFRIVGQEFTKEGWGFAFQRDSPLAAD 785
BLAST of mRNA_M-pyrifera_M_contig104386.942.1 vs. uniprot
Match: A2YG87_ORYSI (Glutamate receptor n=12 Tax=Oryza TaxID=4527 RepID=A2YG87_ORYSI) HSP 1 Score: 82.4 bits (202), Expect = 2.930e-15 Identity = 53/141 (37.59%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 82 RVVITVWLFVMLVATASFTASLASFLTVHHSQTVVNSIDDVDSST-KIALLSGSFEEHYVLENLEIPPSVIVPTSTVDEILDLVADGTVDVGIAA----GPLLEEALAHAKPHCGLIIVGSEAAKTPWAFPMRPNLYFAND 489 R V+ +WLFV+L+ +S+TASL S LTV T + +D + SS I +G F +Y++E L +P S +VP +T+DE D + G D G+AA P +E L++ HC IVG E K W F + + A D Sbjct: 651 RFVLIIWLFVVLIINSSYTASLTSILTVQQLATGITGLDSLLSSALPIGYQAGKFTRNYLIEELNVPESHLVPLNTIDEYADALNRGPKDGGVAAIVDEMPYIEIFLSY---HCNFRIVGQEFTKEGWGFAFQRDSPLAAD 788
BLAST of mRNA_M-pyrifera_M_contig104386.942.1 vs. uniprot
Match: J3MGW4_ORYBR (Glutamate receptor n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3MGW4_ORYBR) HSP 1 Score: 81.6 bits (200), Expect = 5.430e-15 Identity = 53/141 (37.59%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 82 RVVITVWLFVMLVATASFTASLASFLTVHHSQTVVNSIDD-VDSSTKIALLSGSFEEHYVLENLEIPPSVIVPTSTVDEILDLVADGTVDVGIAAG----PLLEEALAHAKPHCGLIIVGSEAAKTPWAFPMRPNLYFAND 489 R V+ +WLFV+L+ +S+TASL S LTV T + ID + S+ I +G F ++Y++E L +P S +VP ST+DE D + G G+AA P +E L++ HC IVG E K W F + + A D Sbjct: 647 RFVLIIWLFVVLIINSSYTASLTSILTVQQLATGITGIDSLISSALPIGYQAGKFTKNYLIEELNVPESRLVPLSTIDEYADALNRGPKYGGVAAIVDEIPYIEIFLSY---HCNFRIVGQEFTKEGWGFAFQRDSPLAAD 784
BLAST of mRNA_M-pyrifera_M_contig104386.942.1 vs. uniprot
Match: A0A2G2W9E4_CAPBA (Glutamate receptor n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2W9E4_CAPBA) HSP 1 Score: 80.9 bits (198), Expect = 1.000e-14 Identity = 56/159 (35.22%), Postives = 81/159 (50.94%), Query Frame = 1 Query: 31 VLWTVFS-----PEEQFKHLSTRVVITVWLFVMLVATASFTASLASFLTVHHSQTVVNSIDD-VDSSTKIALLSGSFEEHYVLENLEIPPSVIVPTSTVDEILDLVADGTVDVGIAAGPLLEEALAHAKPHCGLIIVGSEAAKTPWAFPMRPNLYFAND 489 +LW FS P E R+V+ +WLFVML+ T+S+TASL SFLTV + + I+ V S+ I GSF E+Y+ E + I S +VP + +E D + G V + P ++ L+ +CG VG E K+ W F R + A D Sbjct: 617 ILWFSFSTIFGAPRENTVSTLGRIVLLIWLFVMLIITSSYTASLTSFLTVQQLSSSIKGIESLVTSNEAIGYQVGSFVENYLFEEVNIAKSRLVPLGSPEEYADALEQGRVAAVVDERPYVDLFLST---YCGFQKVGPEFTKSGWGFAFRRDSPLAID 772
BLAST of mRNA_M-pyrifera_M_contig104386.942.1 vs. uniprot
Match: A0A0A9JVD6_ARUDO (PBPe domain-containing protein n=2 Tax=Arundo donax TaxID=35708 RepID=A0A0A9JVD6_ARUDO) HSP 1 Score: 79.0 bits (193), Expect = 1.700e-14 Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 46 FSPEEQFKHLSTRVVITVWLFVMLVATASFTASLASFLTVHHSQTVVNSIDD-VDSSTKIALLSGSFEEHYVLENLEIPPSVIVPTSTVDEILDLVADGTVDVGIAA----GPLLEEALAHAKPHCGLIIVGSEAAKTPWAFPMRPNLYFAND 489 FS + + R V+ +WLFV+L+ +S+TASL S LTV T + +D+ + S+ I +G F +Y++E L IP S +VP +T+ + D + G D G+AA P +E L++ +C IVG E K W F + + A D Sbjct: 3 FSHRQNTESALGRFVLIIWLFVVLIINSSYTASLTSILTVQQLATGITGLDNLISSALPIGYQAGKFTRNYLIEELNIPESRLVPLNTIKDYADALNRGPKDGGVAAIVDEMPYVEIFLSY---YCNFRIVGQEFTKEGWGFAFQRDSPLAAD 152
BLAST of mRNA_M-pyrifera_M_contig104386.942.1 vs. uniprot
Match: A0A061DF27_THECC (Glutamate receptor isoform 5 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061DF27_THECC) HSP 1 Score: 80.1 bits (196), Expect = 1.790e-14 Identity = 59/154 (38.31%), Postives = 83/154 (53.90%), Query Frame = 1 Query: 31 VLWTVFSP---EEQFKHLST--RVVITVWLFVMLVATASFTASLASFLTVHHSQTVVNSIDD-VDSSTKIALLSGSFEEHYVLENLEIPPSVIVPTSTVDEILDLVADGTVDVGIAAGPLLEEALAHA------KPHCGLIIVGSEAAKTPWAF 456 VLW FS + + LST RVV+ +WLF++L+ T+S+TASL S LTV + V ID + + I GSF E+Y+ E L IP S +VP ++ D+ + DG G+AA +++E HA C IVGSE +K W F Sbjct: 540 VLWFSFSTLFFSHRERTLSTLGRVVLFIWLFIVLILTSSYTASLTSILTVEQLSSPVKGIDSLISTGDPIGYQRGSFAENYLSEELSIPKSRLVPLNSADDYAKALKDGPKKGGVAA--VIDE---HAYMELFLSTQCEFSIVGSEFSKMGWGF 688
BLAST of mRNA_M-pyrifera_M_contig104386.942.1 vs. uniprot
Match: S8E9P1_9LAMI (Glutamate receptor (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8E9P1_9LAMI) HSP 1 Score: 80.1 bits (196), Expect = 1.840e-14 Identity = 51/148 (34.46%), Postives = 79/148 (53.38%), Query Frame = 1 Query: 31 VLWTVFS-----PEEQFKHLSTRVVITVWLFVMLVATASFTASLASFLTVHHSQTVVNSIDD-VDSSTKIALLSGSFEEHYVLENLEIPPSVIVPTSTVDEILDLVADGTVDVGIAAGPLLEEALAHAKPHCGLIIVGSEAAKTPWAF 456 + W FS P+E RVV+ +WLFV L+ T+S+TASL++ LTV H+ + I+ + S+ +I GSF E+Y++E L I S +VP + +E D + G V + P ++ LA+ +C IVG E K+ F Sbjct: 597 IFWFGFSSFFSAPKENMMGALARVVLLIWLFVALIVTSSYTASLSAILTVEHAAPSITGIESLIMSNDRIGYQLGSFSEYYLIEQLNIAKSRLVPLGSPEEYADALTTGNVSAIVDERPYVDLFLAN---YCSFEIVGQEFTKSSMGF 741
BLAST of mRNA_M-pyrifera_M_contig104386.942.1 vs. uniprot
Match: A0A061DG48_THECC (Glutamate receptor n=4 Tax=Theobroma cacao TaxID=3641 RepID=A0A061DG48_THECC) HSP 1 Score: 80.1 bits (196), Expect = 1.870e-14 Identity = 59/154 (38.31%), Postives = 83/154 (53.90%), Query Frame = 1 Query: 31 VLWTVFSP---EEQFKHLST--RVVITVWLFVMLVATASFTASLASFLTVHHSQTVVNSIDD-VDSSTKIALLSGSFEEHYVLENLEIPPSVIVPTSTVDEILDLVADGTVDVGIAAGPLLEEALAHA------KPHCGLIIVGSEAAKTPWAF 456 VLW FS + + LST RVV+ +WLF++L+ T+S+TASL S LTV + V ID + + I GSF E+Y+ E L IP S +VP ++ D+ + DG G+AA +++E HA C IVGSE +K W F Sbjct: 632 VLWFSFSTLFFSHRERTLSTLGRVVLFIWLFIVLILTSSYTASLTSILTVEQLSSPVKGIDSLISTGDPIGYQRGSFAENYLSEELSIPKSRLVPLNSADDYAKALKDGPKKGGVAA--VIDE---HAYMELFLSTQCEFSIVGSEFSKMGWGF 780
BLAST of mRNA_M-pyrifera_M_contig104386.942.1 vs. uniprot
Match: A0A5J9TB80_9POAL (Glutamate receptor n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9TB80_9POAL) HSP 1 Score: 79.7 bits (195), Expect = 2.540e-14 Identity = 53/153 (34.64%), Postives = 79/153 (51.63%), Query Frame = 1 Query: 46 FSPEEQFKHLSTRVVITVWLFVMLVATASFTASLASFLTVHHSQTVVNSIDD-VDSSTKIALLSGSFEEHYVLENLEIPPSVIVPTSTVDEILDLVADGTVDVGIAA----GPLLEEALAHAKPHCGLIIVGSEAAKTPWAFPMRPNLYFAND 489 FS + R V+ +WLFV+L+ +S+TASL S LTV T + +D+ + S+ I +G F +Y++E L +P S +VP +T+ E D + G D G+AA P +E L+ HC IVG E K W F + + A D Sbjct: 633 FSHRQNTVSALGRFVLIIWLFVVLIINSSYTASLTSILTVQQLATGITGLDNLISSALPIGYQAGKFTRNYLIEELNVPESRLVPLNTIQEYADALNRGPKDGGVAAIVDEMPYVELFLSK---HCNFRIVGHEFTKEGWGFAFQRDSPLAAD 782 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104386.942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104386.942.1 >prot_M-pyrifera_M_contig104386.942.1 ID=prot_M-pyrifera_M_contig104386.942.1|Name=mRNA_M-pyrifera_M_contig104386.942.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp MGELGTATYAVLWTVFSPEEQFKHLSTRVVITVWLFVMLVATASFTASLAback to top mRNA from alignment at M-pyrifera_M_contig104386:1..489- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104386.942.1 ID=mRNA_M-pyrifera_M_contig104386.942.1|Name=mRNA_M-pyrifera_M_contig104386.942.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=489bp|location=Sequence derived from alignment at M-pyrifera_M_contig104386:1..489- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104386:1..489- >mRNA_M-pyrifera_M_contig104386.942.1 ID=mRNA_M-pyrifera_M_contig104386.942.1|Name=mRNA_M-pyrifera_M_contig104386.942.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig104386:1..489- (Macrocystis pyrifera P11B4 male)back to top |