mRNA_M-pyrifera_M_contig104366.935.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig104366.935.1
Unique NamemRNA_M-pyrifera_M_contig104366.935.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig104366.935.1 vs. uniprot
Match: A0A2E7KIX1_9PLAN (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E7KIX1_9PLAN)

HSP 1 Score: 450 bits (1158), Expect = 1.670e-154
Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 1 
Query:    1 GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGTKQEIVSHGIDKFVNECKKRVLKFAARQTEQSVRLGFWMDWDNPDQLRELAQSVGEEMEVTITTPSGKQVTDRADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSIFVRFPLKDRENEFLLIW 642
            GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGTKQEIVSHGIDKFVNECKKRVLKFAARQTEQSVRLGFWMDWDNPDQLRELAQSVGEE EVTITTPSGKQVTDRADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSIFVRFPLKDRENEFLLIW
Sbjct:   54 GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGTKQEIVSHGIDKFVNECKKRVLKFAARQTEQSVRLGFWMDWDNPDQLRELAQSVGEETEVTITTPSGKQVTDRADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSIFVRFPLKDRENEFLLIW 267
[Close]
BLAST of mRNA_M-pyrifera_M_contig104366.935.1 vs. uniprot
Match: A0A518FKJ1_9PLAN (Isoleucine--tRNA ligase n=9 Tax=Planctomycetaceae TaxID=126 RepID=A0A518FKJ1_9PLAN)

HSP 1 Score: 443 bits (1139), Expect = 2.910e-145
Identity = 206/214 (96.26%), Postives = 213/214 (99.53%), Query Frame = 1 
Query:    1 GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGTKQEIVSHGIDKFVNECKKRVLKFAARQTEQSVRLGFWMDWDNPDQLRELAQSVGEEMEVTITTPSGKQVTDRADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSIFVRFPLKDRENEFLLIW 642
            GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGTKQE+VSHGIDKFVNECKKRVL+FAARQTEQSVRLGFWMDWDNP+QLRELA+S+GEE EVT+TTPSGKQVTDRADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSIFVRFPLKDRENE+LLIW
Sbjct:   54 GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGTKQEVVSHGIDKFVNECKKRVLRFAARQTEQSVRLGFWMDWDNPNQLRELAESIGEETEVTMTTPSGKQVTDRADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSIFVRFPLKDRENEYLLIW 267
[Close]
BLAST of mRNA_M-pyrifera_M_contig104366.935.1 vs. uniprot
Match: A0A350K3D1_9PLAN (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K3D1_9PLAN)

HSP 1 Score: 428 bits (1100), Expect = 1.130e-143
Identity = 195/214 (91.12%), Postives = 210/214 (98.13%), Query Frame = 1 
Query:    1 GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGTKQEIVSHGIDKFVNECKKRVLKFAARQTEQSVRLGFWMDWDNPDQLRELAQSVGEEMEVTITTPSGKQVTDRADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSIFVRFPLKDRENEFLLIW 642
            GVHHAWGR YKDAYQRYYAMTGHELR+QNGFDCQGLWVEVEVEKELGYGTKQE+VSHGIDKFVNECKKRVL+FAARQTEQSVRLG+WMDWDNPD+LR+LA+ VG++ EVT+T PSGKQ+TD+ADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKC+ERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKS+FVRFPLKDRENE+LLIW
Sbjct:   54 GVHHAWGRAYKDAYQRYYAMTGHELRFQNGFDCQGLWVEVEVEKELGYGTKQEVVSHGIDKFVNECKKRVLRFAARQTEQSVRLGYWMDWDNPDELRKLAEYVGKDTEVTLTAPSGKQITDKADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCFERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSVFVRFPLKDRENEYLLIW 267
[Close]
BLAST of mRNA_M-pyrifera_M_contig104366.935.1 vs. uniprot
Match: A0A518IBF9_9PLAN (Isoleucine--tRNA ligase n=11 Tax=Planctomycetaceae TaxID=126 RepID=A0A518IBF9_9PLAN)

HSP 1 Score: 422 bits (1084), Expect = 3.500e-137
Identity = 191/214 (89.25%), Postives = 208/214 (97.20%), Query Frame = 1 
Query:    1 GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGTKQEIVSHGIDKFVNECKKRVLKFAARQTEQSVRLGFWMDWDNPDQLRELAQSVGEEMEVTITTPSGKQVTDRADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSIFVRFPLKDRENEFLLIW 642
            GVHHAWGR YKDAYQRYYAMTGHELR+QNGFDCQGLWVEVEVEKELGYGTKQE+V HGIDKFVNECKKRVL+FAARQTEQSVRLG+WMDWD+PD+LR LA+ VG++ EVT+T PSGKQ+TD+ADMLVS+LGNAEWGGSYFTFSTENNETIWTFLKKC+ERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVH+S+FVRFPLKDRENE+LLIW
Sbjct:   54 GVHHAWGRAYKDAYQRYYAMTGHELRFQNGFDCQGLWVEVEVEKELGYGTKQEVVEHGIDKFVNECKKRVLRFAARQTEQSVRLGYWMDWDDPDELRNLAEYVGKDTEVTLTAPSGKQITDKADMLVSKLGNAEWGGSYFTFSTENNETIWTFLKKCFERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHRSVFVRFPLKDRENEYLLIW 267
[Close]
BLAST of mRNA_M-pyrifera_M_contig104366.935.1 vs. uniprot
Match: A0A517VYS5_9PLAN (Isoleucine--tRNA ligase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VYS5_9PLAN)

HSP 1 Score: 407 bits (1047), Expect = 9.070e-132
Identity = 187/214 (87.38%), Postives = 202/214 (94.39%), Query Frame = 1 
Query:    1 GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGTKQEIVSHGIDKFVNECKKRVLKFAARQTEQSVRLGFWMDWDNPDQLRELAQSVGEEMEVTITTPSGKQVTDRADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSIFVRFPLKDRENEFLLIW 642
            GVHHAWGR YKDAYQRYYAMTGHELR+QNGFDCQGLWVEVEVEKELGYGTKQE+V  GIDKFVNECKKRVL+FAARQTEQSVRLG+WMDWD+P+QLR LA+ VG + +   T PSG+QVTD ADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKC+ERGKVYRG+DVMPWSGRGGSAYSQMEVADGRKLSVH+S+FVRFPLKDRENE+LLIW
Sbjct:   54 GVHHAWGRAYKDAYQRYYAMTGHELRFQNGFDCQGLWVEVEVEKELGYGTKQEVVEDGIDKFVNECKKRVLRFAARQTEQSVRLGYWMDWDDPEQLRALAEFVGTDADFNFTAPSGQQVTDTADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCFERGKVYRGYDVMPWSGRGGSAYSQMEVADGRKLSVHRSVFVRFPLKDRENEYLLIW 267
[Close]
BLAST of mRNA_M-pyrifera_M_contig104366.935.1 vs. uniprot
Match: UPI001986E732 (Class I tRNA ligase family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI001986E732)

HSP 1 Score: 367 bits (943), Expect = 2.340e-123
Identity = 173/230 (75.22%), Postives = 192/230 (83.48%), Query Frame = 1 
Query:    1 GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGTKQEIVSHGIDKFVNECKKRVLKFAARQTEQSVRLGFWMDWDNPDQLRELAQSVGEEMEVTITTPSGKQVTDRADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSIFVRFPLKDR----------------ENEFLLIW 642
            GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEK+L  G+K  I  +GIDKFVNECK+RVLKFAARQTEQS+RLG+W DWD+PD LR LA  +G +  VTITTPSGK  +  A  LV+RLGNAEWGGSYFTFSTENNETIWTFLKKC+ RGK+YRG+DVMPWSGRGGSAYSQMEVADGRKL+VHKSIFVRFPL+ R                +NE+LL+W
Sbjct:   54 GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKQLNLGSKTAIEQYGIDKFVNECKRRVLKFAARQTEQSIRLGYWTDWDDPDTLRLLASKIGTDEVVTITTPSGKTESGTASELVARLGNAEWGGSYFTFSTENNETIWTFLKKCFRRGKIYRGYDVMPWSGRGGSAYSQMEVADGRKLTVHKSIFVRFPLRSRVAPQLGAESRSDSATADNEYLLVW 283
[Close]
BLAST of mRNA_M-pyrifera_M_contig104366.935.1 vs. uniprot
Match: A0A356ABM1_9PLAN (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356ABM1_9PLAN)

HSP 1 Score: 358 bits (919), Expect = 4.050e-123
Identity = 163/214 (76.17%), Postives = 186/214 (86.92%), Query Frame = 1 
Query:    1 GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGTKQEIVSHGIDKFVNECKKRVLKFAARQTEQSVRLGFWMDWDNPDQLRELAQSVGEEMEVTITTPSGKQVTDRADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSIFVRFPLKDRENEFLLIW 642
            GVHHAWGRTYKDA+QRY+AMTGHELRYQNGFDCQGLWVEVEVEKELG GTK  I   GIDKFVN+CK+RVLKFAARQTEQS RLG+WM+WD P +LR+L+ +VG   E+  T   G++V D    +V++LGN EWGGSYFTFSTENNETIWTFLKKC++R K+YRGHDVMPWSGR GSAYSQME+ADGRKL+VH+S+FVRFPL DRENE LLIW
Sbjct:   54 GVHHAWGRTYKDAFQRYFAMTGHELRYQNGFDCQGLWVEVEVEKELGLGTKNAIHEFGIDKFVNQCKRRVLKFAARQTEQSQRLGYWMEWDEPAELRKLSAAVGSSEEIEYTNARGEKVKDVPHQIVAKLGNPEWGGSYFTFSTENNETIWTFLKKCFDRKKIYRGHDVMPWSGRSGSAYSQMEIADGRKLAVHRSLFVRFPLLDRENENLLIW 267
[Close]
BLAST of mRNA_M-pyrifera_M_contig104366.935.1 vs. uniprot
Match: UPI001F0F4D1C (class I tRNA ligase family protein n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI001F0F4D1C)

HSP 1 Score: 380 bits (977), Expect = 2.490e-121
Identity = 173/214 (80.84%), Postives = 196/214 (91.59%), Query Frame = 1 
Query:    1 GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGTKQEIVSHGIDKFVNECKKRVLKFAARQTEQSVRLGFWMDWDNPDQLRELAQSVGEEMEVTITTPSGKQVTDRADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSIFVRFPLKDRENEFLLIW 642
            GVHHAWGRTYKDA+QRY+AMTGHELRYQNGFDCQGLWVEVEVEKE+G+GTK+ I  +GID FVNECK+RVL+FAARQTEQS+RLG+WMDWD+PDQLR+LA+++G +  VTIT+PSGK  T  A  LV+RLGN EWGGSYFTFSTENNETIWTFLKKC+ER KVYRGHDVMPWSGR GSAYSQMEVADGRKL+VH+S+FVRFPL DR+NE LLIW
Sbjct:   55 GVHHAWGRTYKDAFQRYFAMTGHELRYQNGFDCQGLWVEVEVEKEMGFGTKRAIEDYGIDHFVNECKRRVLRFAARQTEQSIRLGYWMDWDDPDQLRDLAEALGTDQTVTITSPSGKTETGPAHQLVARLGNPEWGGSYFTFSTENNETIWTFLKKCFERKKVYRGHDVMPWSGRAGSAYSQMEVADGRKLTVHRSVFVRFPLVDRDNENLLIW 268
[Close]
BLAST of mRNA_M-pyrifera_M_contig104366.935.1 vs. uniprot
Match: A0A2E9VVA4_9PLAN (Isoleucine--tRNA ligase (Fragment) n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E9VVA4_9PLAN)

HSP 1 Score: 357 bits (916), Expect = 7.000e-121
Identity = 162/214 (75.70%), Postives = 186/214 (86.92%), Query Frame = 1 
Query:    1 GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGTKQEIVSHGIDKFVNECKKRVLKFAARQTEQSVRLGFWMDWDNPDQLRELAQSVGEEMEVTITTPSGKQVTDRADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSIFVRFPLKDRENEFLLIW 642
            GVHHAWGRTYKDA+QRY+AMTGHELRYQNGFDCQGLWVEVEVEKELG GTK  I   GIDKFVN+CK+RVLKFAARQTEQS RLG+WM+WD P +LR+L+ +VG   E+  T   G++V D    +V++LGN +WGGSYFTFSTENNETIWTFLKKC++R K+YRGHDVMPWSGR GSAYSQME+ADGRKL+VH+S+FVRFPL DRENE LLIW
Sbjct:   54 GVHHAWGRTYKDAFQRYFAMTGHELRYQNGFDCQGLWVEVEVEKELGLGTKNAIHEFGIDKFVNQCKRRVLKFAARQTEQSQRLGYWMEWDEPAELRKLSAAVGSSEEIEYTNARGEKVKDVPHQIVAKLGNPDWGGSYFTFSTENNETIWTFLKKCFDRKKIYRGHDVMPWSGRSGSAYSQMEIADGRKLAVHRSLFVRFPLLDRENENLLIW 267
[Close]
BLAST of mRNA_M-pyrifera_M_contig104366.935.1 vs. uniprot
Match: A0A3B9CXI8_9PLAN (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B9CXI8_9PLAN)

HSP 1 Score: 359 bits (921), Expect = 7.220e-121
Identity = 159/214 (74.30%), Postives = 187/214 (87.38%), Query Frame = 1 
Query:    1 GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGTKQEIVSHGIDKFVNECKKRVLKFAARQTEQSVRLGFWMDWDNPDQLRELAQSVGEEMEVTITTPSGKQVTDRADMLVSRLGNAEWGGSYFTFSTENNETIWTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSIFVRFPLKDRENEFLLIW 642
            GVHHAWGRTYKD YQR++AMTGH+ RYQNGFDCQGLWVEVEVEK+LG GTK  +  +GID FVNECK+RVL+FAARQTEQS RLG+WM+WD+P+QLR LA+ +G + +VT   P G+ VT  A  +V +LGN EWGGSYFTFSTENNETIW FLKKC+ RGK+Y+GHDVMPWSGRGGSAYSQME+A+GRKL+ HKS+FVRFPL+DR+NEFLLIW
Sbjct:   54 GVHHAWGRTYKDTYQRFFAMTGHDQRYQNGFDCQGLWVEVEVEKQLGLGTKTAVNEYGIDNFVNECKRRVLRFAARQTEQSQRLGYWMEWDDPEQLRTLAEHLGTDEQVTFQPPRGEAVTAAAHQVVEKLGNPEWGGSYFTFSTENNETIWDFLKKCFTRGKIYQGHDVMPWSGRGGSAYSQMEIAEGRKLTTHKSVFVRFPLRDRDNEFLLIW 267
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104366.935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7KIX1_9PLAN1.670e-15499.53Isoleucine--tRNA ligase (Fragment) n=1 Tax=Gimesia... [more]
A0A518FKJ1_9PLAN2.910e-14596.26Isoleucine--tRNA ligase n=9 Tax=Planctomycetaceae ... [more]
A0A350K3D1_9PLAN1.130e-14391.12Isoleucine--tRNA ligase (Fragment) n=1 Tax=Plancto... [more]
A0A518IBF9_9PLAN3.500e-13789.25Isoleucine--tRNA ligase n=11 Tax=Planctomycetaceae... [more]
A0A517VYS5_9PLAN9.070e-13287.38Isoleucine--tRNA ligase n=2 Tax=Gimesia aquarii Ta... [more]
UPI001986E7322.340e-12375.22Class I tRNA ligase family protein n=1 Tax=Plancto... [more]
A0A356ABM1_9PLAN4.050e-12376.17Isoleucine--tRNA ligase (Fragment) n=1 Tax=Plancto... [more]
UPI001F0F4D1C2.490e-12180.84class I tRNA ligase family protein n=1 Tax=Rubinis... [more]
A0A2E9VVA4_9PLAN7.000e-12175.70Isoleucine--tRNA ligase (Fragment) n=2 Tax=Plancto... [more]
A0A3B9CXI8_9PLAN7.220e-12174.30Isoleucine--tRNA ligase (Fragment) n=1 Tax=Plancto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104366contigM-pyrifera_M_contig104366:2..643 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score428.7
Seed ortholog evalue1.6e-117
Seed eggNOG ortholog344747.PM8797T_00502
Preferred nameileS
KEGG rclassRC00055,RC00523
KEGG koko:K01870
KEGG ReactionR03656
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
EggNOG OGs2IWX2@203682,COG0060@1,COG0060@2
EC6.1.1.5
COG Functional cat.J
BiGG ReactioniG2583_1286.G2583_0027,iPC815.YPO0475
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons1
Model size642
Cds size642
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815550.5085478-CDS-M-pyrifera_M_contig104366:1..6431622815550.5085478-CDS-M-pyrifera_M_contig104366:1..643Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104366 2..643 -
1692277459.6211-CDS-M-pyrifera_M_contig104366:1..6431692277459.6211-CDS-M-pyrifera_M_contig104366:1..643Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104366 2..643 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104366.935.1prot_M-pyrifera_M_contig104366.935.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig104366 2..643 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig104366.935.1

>prot_M-pyrifera_M_contig104366.935.1 ID=prot_M-pyrifera_M_contig104366.935.1|Name=mRNA_M-pyrifera_M_contig104366.935.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=214bp
GVHHAWGRTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGT
KQEIVSHGIDKFVNECKKRVLKFAARQTEQSVRLGFWMDWDNPDQLRELA
QSVGEEMEVTITTPSGKQVTDRADMLVSRLGNAEWGGSYFTFSTENNETI
WTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVADGRKLSVHKSIFVR
FPLKDRENEFLLIW
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mRNA from alignment at M-pyrifera_M_contig104366:2..643-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig104366.935.1 ID=mRNA_M-pyrifera_M_contig104366.935.1|Name=mRNA_M-pyrifera_M_contig104366.935.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig104366:2..643- (Macrocystis pyrifera P11B4 male)
GGCGTGCACCATGCCTGGGGAAGAACCTACAAAGACGCCTATCAACGCTA
TTACGCGATGACGGGACATGAACTCCGCTACCAGAACGGCTTCGACTGCC
AGGGGCTCTGGGTCGAAGTGGAGGTCGAAAAAGAGCTGGGATATGGCACC
AAACAGGAAATCGTTTCTCACGGGATCGATAAATTCGTCAACGAATGTAA
AAAGCGGGTACTGAAGTTCGCCGCTCGTCAGACCGAGCAGTCTGTACGAC
TGGGCTTCTGGATGGACTGGGACAATCCGGATCAGTTACGTGAGCTGGCG
CAGTCCGTCGGTGAAGAGATGGAAGTCACCATCACCACCCCCAGCGGTAA
GCAGGTAACTGATCGAGCTGACATGCTGGTCTCACGTCTAGGGAATGCGG
AATGGGGCGGGAGCTACTTCACCTTCTCTACTGAAAACAATGAAACCATC
TGGACCTTCCTCAAGAAGTGCTATGAACGGGGGAAGGTTTATCGAGGACA
TGACGTGATGCCCTGGTCGGGACGCGGGGGCAGCGCCTACAGCCAGATGG
AAGTGGCCGATGGTCGTAAGCTCTCTGTCCACAAATCCATCTTCGTCCGC
TTCCCTCTGAAAGACCGGGAAAACGAATTCCTCCTGATCTGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig104366:2..643-

>mRNA_M-pyrifera_M_contig104366.935.1 ID=mRNA_M-pyrifera_M_contig104366.935.1|Name=mRNA_M-pyrifera_M_contig104366.935.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1284bp|location=Sequence derived from alignment at M-pyrifera_M_contig104366:2..643- (Macrocystis pyrifera P11B4 male)
GGCGTGCACCATGCCTGGGGAAGAACCTACAAAGACGCCTATCAACGCTA
TTACGCGATGACGGGACATGAACTCCGCTACCAGAACGGCTTCGACTGCC
AGGGGCTCTGGGTCGAAGTGGAGGTCGAAAAAGAGCTGGGATATGGCACC
AAACAGGAAATCGTTTCTCACGGGATCGATAAATTCGTCAACGAATGTAA
AAAGCGGGTACTGAAGTTCGCCGCTCGTCAGACCGAGCAGTCTGTACGAC
TGGGCTTCTGGATGGACTGGGACAATCCGGATCAGTTACGTGAGCTGGCG
CAGTCCGTCGGTGAAGAGATGGAAGTCACCATCACCACCCCCAGCGGTAA
GCAGGTAACTGATCGAGCTGACATGCTGGTCTCACGTCTAGGGAATGCGG
AATGGGGCGGGAGCTACTTCACCTTCTCTACTGAAAACAATGAAACCATC
TGGACCTTCCTCAAGAAGTGCTATGAACGGGGGAAGGTTTATCGAGGACA
TGACGTGATGCCCTGGTCGGGACGCGGGGGCAGCGCCTACAGCCAGATGG
AAGTGGCCGATGGTCGTAAGCTCTCTGTCCACAAATCCATCTTCGTCCGC
TTCCCTCTGAAAGACCGGGAAAACGAATTCCTCCTGATCTGGGGCGTGCA
CCATGCCTGGGGAAGAACCTACAAAGACGCCTATCAACGCTATTACGCGA
TGACGGGACATGAACTCCGCTACCAGAACGGCTTCGACTGCCAGGGGCTC
TGGGTCGAAGTGGAGGTCGAAAAAGAGCTGGGATATGGCACCAAACAGGA
AATCGTTTCTCACGGGATCGATAAATTCGTCAACGAATGTAAAAAGCGGG
TACTGAAGTTCGCCGCTCGTCAGACCGAGCAGTCTGTACGACTGGGCTTC
TGGATGGACTGGGACAATCCGGATCAGTTACGTGAGCTGGCGCAGTCCGT
CGGTGAAGAGATGGAAGTCACCATCACCACCCCCAGCGGTAAGCAGGTAA
CTGATCGAGCTGACATGCTGGTCTCACGTCTAGGGAATGCGGAATGGGGC
GGGAGCTACTTCACCTTCTCTACTGAAAACAATGAAACCATCTGGACCTT
CCTCAAGAAGTGCTATGAACGGGGGAAGGTTTATCGAGGACATGACGTGA
TGCCCTGGTCGGGACGCGGGGGCAGCGCCTACAGCCAGATGGAAGTGGCC
GATGGTCGTAAGCTCTCTGTCCACAAATCCATCTTCGTCCGCTTCCCTCT
GAAAGACCGGGAAAACGAATTCCTCCTGATCTGG
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