mRNA_M-pyrifera_M_contig104360.933.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig104360.933.1
Unique NamemRNA_M-pyrifera_M_contig104360.933.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig104360.933.1 vs. uniprot
Match: A0A2E8D4U7_9PLAN (Sulfatase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8D4U7_9PLAN)

HSP 1 Score: 97.8 bits (242), Expect = 1.720e-22
Identity = 45/48 (93.75%), Postives = 47/48 (97.92%), Query Frame = 1 
Query:    1 YARTPNLDRLAAQGVRFEHAFVPYSVCSPSRACFLTGLYPHQNGQVGL 144
            YARTPNLDRLAA+GVRFE+AFVPYSVCSPSRA FLTGLYPHQNGQVGL
Sbjct:   51 YARTPNLDRLAAEGVRFENAFVPYSVCSPSRAVFLTGLYPHQNGQVGL 98
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BLAST of mRNA_M-pyrifera_M_contig104360.933.1 vs. uniprot
Match: A0A350KFT1_9PLAN (Sulfatase domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KFT1_9PLAN)

HSP 1 Score: 93.6 bits (231), Expect = 3.430e-22
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 1 
Query:    1 YARTPNLDRLAAQGVRFEHAFVPYSVCSPSRACFLTGLYPHQNGQVGL 144
            YA+TP+LD+LA QGVRFE+AFVPYSVCSPSRACFLTG YPHQNGQ+GL
Sbjct:   53 YAKTPHLDQLAKQGVRFENAFVPYSVCSPSRACFLTGKYPHQNGQIGL 100
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BLAST of mRNA_M-pyrifera_M_contig104360.933.1 vs. uniprot
Match: A0A517VV53_9PLAN (Choline-sulfatase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VV53_9PLAN)

HSP 1 Score: 96.7 bits (239), Expect = 4.450e-22
Identity = 42/48 (87.50%), Postives = 48/48 (100.00%), Query Frame = 1 
Query:    1 YARTPNLDRLAAQGVRFEHAFVPYSVCSPSRACFLTGLYPHQNGQVGL 144
            YA+TP+LDRLA++GVRFE+AFVPYSVCSPSRACFLTGLYPHQNGQ+GL
Sbjct:   56 YAQTPHLDRLASEGVRFENAFVPYSVCSPSRACFLTGLYPHQNGQIGL 103
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BLAST of mRNA_M-pyrifera_M_contig104360.933.1 vs. uniprot
Match: A0A518DLE9_9BACT (Choline-sulfatase n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518DLE9_9BACT)

HSP 1 Score: 96.3 bits (238), Expect = 6.000e-22
Identity = 42/48 (87.50%), Postives = 48/48 (100.00%), Query Frame = 1 
Query:    1 YARTPNLDRLAAQGVRFEHAFVPYSVCSPSRACFLTGLYPHQNGQVGL 144
            YA+TP+LD+LA+QGVRFE+AFVPYSVCSPSRACFLTGLYPHQNGQ+GL
Sbjct:   50 YAQTPHLDQLASQGVRFENAFVPYSVCSPSRACFLTGLYPHQNGQIGL 97
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BLAST of mRNA_M-pyrifera_M_contig104360.933.1 vs. uniprot
Match: A0A517WFP3_9PLAN (Arylsulfatase n=9 Tax=Gimesia TaxID=1649453 RepID=A0A517WFP3_9PLAN)

HSP 1 Score: 94.4 bits (233), Expect = 2.950e-21
Identity = 41/48 (85.42%), Postives = 47/48 (97.92%), Query Frame = 1 
Query:    1 YARTPNLDRLAAQGVRFEHAFVPYSVCSPSRACFLTGLYPHQNGQVGL 144
            YA+TP+LDRLA++GVRFE+AFVPYSVCSPSRACFLTG YPHQNGQ+GL
Sbjct:   53 YAQTPHLDRLASEGVRFENAFVPYSVCSPSRACFLTGKYPHQNGQIGL 100
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BLAST of mRNA_M-pyrifera_M_contig104360.933.1 vs. uniprot
Match: A0A517XEG4_9PLAN (Choline-sulfatase n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517XEG4_9PLAN)

HSP 1 Score: 93.6 bits (231), Expect = 5.850e-21
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 1 
Query:    1 YARTPNLDRLAAQGVRFEHAFVPYSVCSPSRACFLTGLYPHQNGQVGL 144
            YA+TP+LD+LA QGVRFE+AFVPYSVCSPSRACFLTG YPHQNGQ+GL
Sbjct:   80 YAKTPHLDQLAKQGVRFENAFVPYSVCSPSRACFLTGKYPHQNGQIGL 127
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BLAST of mRNA_M-pyrifera_M_contig104360.933.1 vs. uniprot
Match: A0A517VGS6_9PLAN (Arylsulfatase n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VGS6_9PLAN)

HSP 1 Score: 93.2 bits (230), Expect = 7.630e-21
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 1 
Query:    1 YARTPNLDRLAAQGVRFEHAFVPYSVCSPSRACFLTGLYPHQNGQVGL 144
            YARTP+LD+LA +GVRFE+AFVPYSVCSPSRACFLTG YPHQNGQ+GL
Sbjct:   53 YARTPHLDQLAEKGVRFENAFVPYSVCSPSRACFLTGKYPHQNGQIGL 100
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BLAST of mRNA_M-pyrifera_M_contig104360.933.1 vs. uniprot
Match: A0A518A994_9PLAN (Choline-sulfatase n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A994_9PLAN)

HSP 1 Score: 92.0 bits (227), Expect = 1.980e-20
Identity = 40/48 (83.33%), Postives = 47/48 (97.92%), Query Frame = 1 
Query:    1 YARTPNLDRLAAQGVRFEHAFVPYSVCSPSRACFLTGLYPHQNGQVGL 144
            YA+TP+L++LAA+GVRFE+AFVPYSVCSPSRACFLTG YPHQNGQ+GL
Sbjct:   53 YAQTPHLNQLAAEGVRFENAFVPYSVCSPSRACFLTGRYPHQNGQIGL 100
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BLAST of mRNA_M-pyrifera_M_contig104360.933.1 vs. uniprot
Match: A0A2E2C883_9PLAN (Sulfatase n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C883_9PLAN)

HSP 1 Score: 90.9 bits (224), Expect = 5.080e-20
Identity = 40/48 (83.33%), Postives = 45/48 (93.75%), Query Frame = 1 
Query:    1 YARTPNLDRLAAQGVRFEHAFVPYSVCSPSRACFLTGLYPHQNGQVGL 144
            YA+TP+LD+LA  GVRFE+AFVPYSVCSPSRACFLTG YPHQNGQ+GL
Sbjct:   53 YAQTPHLDQLAQTGVRFENAFVPYSVCSPSRACFLTGKYPHQNGQIGL 100
[Close]
BLAST of mRNA_M-pyrifera_M_contig104360.933.1 vs. uniprot
Match: A0A1Q2MCW0_9BACT (Arylsulfatase n=1 Tax=Limihaloglobus sulfuriphilus TaxID=1851148 RepID=A0A1Q2MCW0_9BACT)

HSP 1 Score: 90.1 bits (222), Expect = 9.450e-20
Identity = 40/48 (83.33%), Postives = 46/48 (95.83%), Query Frame = 1 
Query:    1 YARTPNLDRLAAQGVRFEHAFVPYSVCSPSRACFLTGLYPHQNGQVGL 144
            YARTP+LD+LA +GVRFE+AFVPYSVCSPSRA FLTGLYPHQ+GQ+GL
Sbjct:   55 YARTPSLDKLAQKGVRFENAFVPYSVCSPSRASFLTGLYPHQHGQIGL 102
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104360.933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8D4U7_9PLAN1.720e-2293.75Sulfatase n=1 Tax=Planctomycetaceae bacterium TaxI... [more]
A0A350KFT1_9PLAN3.430e-2285.42Sulfatase domain-containing protein (Fragment) n=1... [more]
A0A517VV53_9PLAN4.450e-2287.50Choline-sulfatase n=2 Tax=Gimesia aquarii TaxID=25... [more]
A0A518DLE9_9BACT6.000e-2287.50Choline-sulfatase n=1 Tax=Lignipirellula cremea Ta... [more]
A0A517WFP3_9PLAN2.950e-2185.42Arylsulfatase n=9 Tax=Gimesia TaxID=1649453 RepID=... [more]
A0A517XEG4_9PLAN5.850e-2185.42Choline-sulfatase n=6 Tax=Gimesia TaxID=1649453 Re... [more]
A0A517VGS6_9PLAN7.630e-2185.42Arylsulfatase n=1 Tax=Gimesia algae TaxID=2527971 ... [more]
A0A518A994_9PLAN1.980e-2083.33Choline-sulfatase n=3 Tax=Gimesia panareensis TaxI... [more]
A0A2E2C883_9PLAN5.080e-2083.33Sulfatase n=3 Tax=Planctomycetaceae TaxID=126 RepI... [more]
A0A1Q2MCW0_9BACT9.450e-2083.33Arylsulfatase n=1 Tax=Limihaloglobus sulfuriphilus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104360contigM-pyrifera_M_contig104360:93..260 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score95.1
Seed ortholog evalue1.1e-17
Seed eggNOG ortholog344747.PM8797T_24976
KEGG koko:K01565
KEGG ReactionR07814
KEGG Pathwayko00531,ko01100,ko04142,map00531,map01100,map04142
KEGG ModuleM00078
Hectar predicted targeting categoryno signal peptide or anchor
EggNOG free text desc.COG3119 Arylsulfatase A
EggNOG OGs2IX47@203682,COG3119@1,COG3119@2
EC3.10.1.1
COG Functional cat.P
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size168
Cds size168
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815550.4216266-CDS-M-pyrifera_M_contig104360:92..2601622815550.4216266-CDS-M-pyrifera_M_contig104360:92..260Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104360 93..260 -
1692277459.597307-CDS-M-pyrifera_M_contig104360:92..2601692277459.597307-CDS-M-pyrifera_M_contig104360:92..260Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104360 93..260 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104360.933.1prot_M-pyrifera_M_contig104360.933.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig104360 93..260 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig104360.933.1

>prot_M-pyrifera_M_contig104360.933.1 ID=prot_M-pyrifera_M_contig104360.933.1|Name=mRNA_M-pyrifera_M_contig104360.933.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=56bp
YARTPNLDRLAAQGVRFEHAFVPYSVCSPSRACFLTGLYPHQNGQVGLHD
LNRWL*
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mRNA from alignment at M-pyrifera_M_contig104360:93..260-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig104360.933.1 ID=mRNA_M-pyrifera_M_contig104360.933.1|Name=mRNA_M-pyrifera_M_contig104360.933.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=168bp|location=Sequence derived from alignment at M-pyrifera_M_contig104360:93..260- (Macrocystis pyrifera P11B4 male)
TATGCTCGCACACCGAATTTAGATCGACTCGCGGCTCAGGGAGTGCGATT
TGAGCATGCGTTTGTGCCATATTCAGTCTGTTCGCCGTCGCGCGCCTGTT
TCCTGACCGGGTTATACCCACACCAAAACGGACAGGTTGGTTTACACGAC
TTGAACAGATGGCTTTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig104360:93..260-

>mRNA_M-pyrifera_M_contig104360.933.1 ID=mRNA_M-pyrifera_M_contig104360.933.1|Name=mRNA_M-pyrifera_M_contig104360.933.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=336bp|location=Sequence derived from alignment at M-pyrifera_M_contig104360:93..260- (Macrocystis pyrifera P11B4 male)
TATGCTCGCACACCGAATTTAGATCGACTCGCGGCTCAGGGAGTGCGATT
TGAGCATGCGTTTGTGCCATATTCAGTCTGTTCGCCGTCGCGCGCCTGTT
TCCTGACCGGGTTATACCCACACCAAAACGGACAGGTTGGTTTACACGAC
TTGAACAGATGGCTTTAGTATGCTCGCACACCGAATTTAGATCGACTCGC
GGCTCAGGGAGTGCGATTTGAGCATGCGTTTGTGCCATATTCAGTCTGTT
CGCCGTCGCGCGCCTGTTTCCTGACCGGGTTATACCCACACCAAAACGGA
CAGGTTGGTTTACACGACTTGAACAGATGGCTTTAG
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