mRNA_M-pyrifera_M_contig104233.910.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig104233.910.1
Unique NamemRNA_M-pyrifera_M_contig104233.910.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig104233.910.1 vs. uniprot
Match: A0A5A8D760_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D760_CAFRO)

HSP 1 Score: 275 bits (704), Expect = 1.220e-84
Identity = 139/214 (64.95%), Postives = 167/214 (78.04%), Query Frame = 1 
Query:    4 REAPRLLGAADEYKLLGPEDTEDS--MFYRSLAMEFSRVQISVDTFFFSASYTDVASVGAISRFTAGQVFYYPAFTAALDGHRLHGDVVHDLTRNTGFEAVMRVRTSRGLRVKNFYGAFFIRGQDLLAMPNATVNTAFNLELEYTAEHLKPGSIVTIQAALLYTNPESERRICVHTLAVPVATTPQDVFARSSIDSISNMLAKRALDVALREGL 639
            REAP++LG+  EYKLL P+D   +  ++YR  A EFSR QISVDTFFFS  Y DVAS+ A+SRFT+GQ ++YPAFTAA DG R H D+V DLTR TGFEAVMRVR SRG+RV NFYG FFIRGQDLLAMPN T +TAFN+ELE+ +E + PGS VTIQ ALLYTN + ERRI VHTLA+PVAT P DV   +  ++++NM++KR LD  LR GL
Sbjct:  275 REAPQMLGSPSEYKLLSPDDDPKAQGLYYRQQAAEFSRQQISVDTFFFSPGYADVASIAAVSRFTSGQAYHYPAFTAAADGARFHADLVQDLTRTTGFEAVMRVRCSRGVRVLNFYGNFFIRGQDLLAMPNITSDTAFNIELEHASEPIAPGSKVTIQGALLYTNAKGERRITVHTLAIPVATRPLDVLQAADAEAVANMISKRGLDTVLRTGL 488
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BLAST of mRNA_M-pyrifera_M_contig104233.910.1 vs. uniprot
Match: A0A7S1CB04_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB04_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.750e-61
Identity = 113/212 (53.30%), Postives = 149/212 (70.28%), Query Frame = 1 
Query:    4 REAPRLLGAADEYKLLGPEDTEDSMFYRSLAMEFSRVQISVDTFFFSASYTDVASVGAISRFTAGQVFYYPAFTAALDGHRLHGDVVHDLTRNTGFEAVMRVRTSRGLRVKNFYGAFFIRGQDLLAMPNATVNTAFNLELEYTAEHLKPGSIVTIQAALLYTNPESERRICVHTLAVPVATTPQDVFARSSIDSISNMLAKRALDVALREGL 639
            RE  +LLG   E+ +L  ED     FY++ A+EFS+VQIS D F  S SYTDVA++  +SR TAG V++YPAF  A D  R   D+ HDL R TG+EAVMRVR SRG+RV NF+G F++R QDLLA+PN T +TA  ++LEY  + L+PG++V IQAALLYT    ERRICVHT AVPV T   D++    +++++N++A RAL+ A R GL
Sbjct:  476 RENAKLLGTDSEHSMLNAEDP----FYKNQAIEFSKVQISCDLFLTSPSYTDVATLSDLSRLTAGHVYHYPAFNHARDAARFRADLSHDLERTTGWEAVMRVRCSRGVRVTNFHGNFYMRSQDLLALPNVTSDTACTVDLEYV-DALQPGTVVVIQAALLYTTSSGERRICVHTAAVPVTTNVLDIYRGVDVEAVTNLVAARALEAARRTGL 682
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BLAST of mRNA_M-pyrifera_M_contig104233.910.1 vs. uniprot
Match: A0A024TUF0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUF0_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.850e-60
Identity = 115/212 (54.25%), Postives = 150/212 (70.75%), Query Frame = 1 
Query:    4 REAPRLLGAADEYKLLGPEDTEDSMFYRSLAMEFSRVQISVDTFFFSASYTDVASVGAISRFTAGQVFYYPAFTAALDGHRLHGDVVHDLTRNTGFEAVMRVRTSRGLRVKNFYGAFFIRGQDLLAMPNATVNTAFNLELEYTAEHLKPGSIVTIQAALLYTNPESERRICVHTLAVPVATTPQDVFARSSIDSISNMLAKRALDVALREGL 639
            RE  R+LG+  E+ LL P DT    FYR  A+EF R Q+SVDTF FS  YTD AS+GA+S+++AGQVFYYP FTAA DG +   ++ H LTR TG+EAVMRVR ++G+R+ NFYG  F+RG DLLA+PN   + AF +E+E+  + L   S+++IQAALLYT    ERRI V T+AVPV     +VF    +D+I NM+AK AL+VAL+ GL
Sbjct:  582 REDSRVLGSNKEHDLLNPVDT----FYRKNAIEFCRQQVSVDTFLFSPQYTDYASLGAMSKYSAGQVFYYPGFTAAKDGDKFRAELAHTLTRETGWEAVMRVRCTKGMRLVNFYGNSFLRGPDLLALPNCHADAAFAIEIEHQ-DALLTASVISIQAALLYTTSCGERRIRVLTVAVPVTKLFAEVFRSVDVDAICNMIAKNALEVALKTGL 788
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BLAST of mRNA_M-pyrifera_M_contig104233.910.1 vs. uniprot
Match: A0A1V9YHI7_9STRA (Protein transporter Sec24 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YHI7_9STRA)

HSP 1 Score: 212 bits (540), Expect = 4.410e-60
Identity = 111/212 (52.36%), Postives = 150/212 (70.75%), Query Frame = 1 
Query:    4 REAPRLLGAADEYKLLGPEDTEDSMFYRSLAMEFSRVQISVDTFFFSASYTDVASVGAISRFTAGQVFYYPAFTAALDGHRLHGDVVHDLTRNTGFEAVMRVRTSRGLRVKNFYGAFFIRGQDLLAMPNATVNTAFNLELEYTAEHLKPGSIVTIQAALLYTNPESERRICVHTLAVPVATTPQDVFARSSIDSISNMLAKRALDVALREGL 639
            RE PR+LG+  E+ LL P DT    FYR  A+EF R Q+SVDTF FS  YTD AS+G +S+++AGQVF+YP FTAA DG +   D+ H LTR TG+EAV+RVR ++G+R+ NFYG  F+RG DLLA+PN   + AF +E+E+  + L   +++ +Q+ALLYT    ERRI VHTLAVPV     +VF    +D++ N++AK AL+VAL+ GL
Sbjct:  563 REDPRMLGSDKEHNLLNPVDT----FYRKNAIEFCRQQVSVDTFLFSPQYTDFASLGCLSKYSAGQVFHYPGFTAAADGAKFAHDLAHCLTRETGWEAVLRVRCTKGMRLSNFYGNSFLRGPDLLALPNVHRDAAFAIEIEHN-DALLTANVICVQSALLYTTSCGERRIRVHTLAVPVTKLFAEVFRSVDVDAMCNLIAKNALEVALKSGL 769
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BLAST of mRNA_M-pyrifera_M_contig104233.910.1 vs. uniprot
Match: T0QMG2_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QMG2_SAPDV)

HSP 1 Score: 208 bits (529), Expect = 4.210e-59
Identity = 111/212 (52.36%), Postives = 148/212 (69.81%), Query Frame = 1 
Query:    4 REAPRLLGAADEYKLLGPEDTEDSMFYRSLAMEFSRVQISVDTFFFSASYTDVASVGAISRFTAGQVFYYPAFTAALDGHRLHGDVVHDLTRNTGFEAVMRVRTSRGLRVKNFYGAFFIRGQDLLAMPNATVNTAFNLELEYTAEHLKPGSIVTIQAALLYTNPESERRICVHTLAVPVATTPQDVFARSSIDSISNMLAKRALDVALREGL 639
            RE  RLLG   E+ LL   DT    FYR  A+EF R Q+SVDTF FS  YTD AS+G +S+++AGQVFYYP F+A++DG +   ++ H LTR TG+EAVMRVR ++G+R+ NFYG  F+RG DLLA+PN   + AF +ELE+  + L   S++ +Q+ALLYT    ERRI VHTLAVPV     +VF    +D++ N++AK AL+VAL+ GL
Sbjct:  369 REDTRLLGTDKEHNLLNAVDT----FYRKNAIEFCRQQVSVDTFLFSPQYTDFASLGCMSKYSAGQVFYYPNFSASVDGDKFAAELQHCLTRETGWEAVMRVRATKGMRLSNFYGNSFLRGPDLLALPNVHRDAAFAIELEHN-DALLTASVICVQSALLYTTSCGERRIRVHTLAVPVTKLYAEVFRSVDVDAMCNLIAKNALEVALKSGL 575
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BLAST of mRNA_M-pyrifera_M_contig104233.910.1 vs. uniprot
Match: A0A1W0A274_9STRA (Transporter Sec24 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A274_9STRA)

HSP 1 Score: 207 bits (526), Expect = 6.800e-59
Identity = 107/212 (50.47%), Postives = 149/212 (70.28%), Query Frame = 1 
Query:    4 REAPRLLGAADEYKLLGPEDTEDSMFYRSLAMEFSRVQISVDTFFFSASYTDVASVGAISRFTAGQVFYYPAFTAALDGHRLHGDVVHDLTRNTGFEAVMRVRTSRGLRVKNFYGAFFIRGQDLLAMPNATVNTAFNLELEYTAEHLKPGSIVTIQAALLYTNPESERRICVHTLAVPVATTPQDVFARSSIDSISNMLAKRALDVALREGL 639
            RE  R+LG+  E+ LL P DT    FYR  A+EF R Q+SVDTF FS  YTD AS+G +S+++AG+VF+YP F+AA DG +   ++ H LTR TG+EAVMRVR ++G+R+ NFYG  F+RG DLLA+PN   + A+ +E+E+  + L   S++ +Q+ALLYT    ERRI VHT+AVPV     +VF    +D++ N++AK AL+VAL+ GL
Sbjct:  322 REDTRMLGSDKEHNLLNPVDT----FYRKNAIEFCRQQVSVDTFLFSPQYTDFASLGCLSKYSAGEVFFYPGFSAAKDGEKFSNELAHCLTRETGWEAVMRVRVTKGMRLSNFYGNSFLRGPDLLALPNCHRDAAYAIEIEHN-DALLTASVICVQSALLYTTSCGERRIRVHTVAVPVTKLFAEVFRSVDVDAMCNLIAKNALEVALKTGL 528
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BLAST of mRNA_M-pyrifera_M_contig104233.910.1 vs. uniprot
Match: W4GMY2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMY2_9STRA)

HSP 1 Score: 207 bits (528), Expect = 2.090e-58
Identity = 111/212 (52.36%), Postives = 148/212 (69.81%), Query Frame = 1 
Query:    4 REAPRLLGAADEYKLLGPEDTEDSMFYRSLAMEFSRVQISVDTFFFSASYTDVASVGAISRFTAGQVFYYPAFTAALDGHRLHGDVVHDLTRNTGFEAVMRVRTSRGLRVKNFYGAFFIRGQDLLAMPNATVNTAFNLELEYTAEHLKPGSIVTIQAALLYTNPESERRICVHTLAVPVATTPQDVFARSSIDSISNMLAKRALDVALREGL 639
            RE  R+LG   E+ LL P DT    FYR  A+EF R Q+SVDTF FS  YTD AS+GA+S+++AGQVF+YP F AA DG +   ++ H LTR TG+E+VMRVR ++G+R+ NFYG  F+RG DLLA+PN   + AF +E+E+  + L   S+++IQAALLYT    ERRI V T+A+PV     +VF    +D+I NM+AK AL+VAL+ GL
Sbjct:  578 REDSRVLGTNKEHDLLNPVDT----FYRKNAIEFCRQQVSVDTFLFSPQYTDYASLGAMSKYSAGQVFHYPGFVAAKDGDKFSAELAHTLTRETGWESVMRVRCTKGMRLVNFYGNSFLRGPDLLALPNCHADAAFAIEIEHQ-DALLTASVISIQAALLYTTSCGERRIRVLTVAIPVTKLFAEVFRSVDVDAICNMIAKNALEVALKSGL 784
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BLAST of mRNA_M-pyrifera_M_contig104233.910.1 vs. uniprot
Match: A0A2D4BP64_PYTIN (Putative vesicle coat complex COPII subunit SEC24/subunit SFB2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BP64_PYTIN)

HSP 1 Score: 207 bits (528), Expect = 2.480e-58
Identity = 106/212 (50.00%), Postives = 153/212 (72.17%), Query Frame = 1 
Query:    4 REAPRLLGAADEYKLLGPEDTEDSMFYRSLAMEFSRVQISVDTFFFSASYTDVASVGAISRFTAGQVFYYPAFTAALDGHRLHGDVVHDLTRNTGFEAVMRVRTSRGLRVKNFYGAFFIRGQDLLAMPNATVNTAFNLELEYTAEHLKPGSIVTIQAALLYTNPESERRICVHTLAVPVATTPQDVFARSSIDSISNMLAKRALDVALREGL 639
            R+ PRL+G   E+ LL   DT    FYRS A++F R Q+SVDTF FS+ YTDVA++G++S+F+AGQ++YYPAF+A  DG +   ++ H LTR TG+EAVMRVR ++G+R+ NFYG  F+RG DLLA+P    + +F +E+ ++ + L   S +++QAA+LYTN   ERRI VHTL VPV+    +VF  + +D++ NM+AK+AL+ AL+ GL
Sbjct:  635 RDNPRLIGTDKEHSLLNAADT----FYRSNAIDFCRQQVSVDTFLFSSQYTDVATLGSLSKFSAGQLYYYPAFSAERDGEKFKKELAHCLTRETGWEAVMRVRCTKGMRLTNFYGNHFLRGPDLLALPTVHSDASFAIEITHS-DALLSSSTISVQAAVLYTNSGGERRIRVHTLCVPVSKIFAEVFRSADVDAMCNMMAKQALETALKTGL 841
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BLAST of mRNA_M-pyrifera_M_contig104233.910.1 vs. uniprot
Match: A0A067CH61_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CH61_SAPPC)

HSP 1 Score: 204 bits (520), Expect = 6.920e-58
Identity = 110/212 (51.89%), Postives = 146/212 (68.87%), Query Frame = 1 
Query:    4 REAPRLLGAADEYKLLGPEDTEDSMFYRSLAMEFSRVQISVDTFFFSASYTDVASVGAISRFTAGQVFYYPAFTAALDGHRLHGDVVHDLTRNTGFEAVMRVRTSRGLRVKNFYGAFFIRGQDLLAMPNATVNTAFNLELEYTAEHLKPGSIVTIQAALLYTNPESERRICVHTLAVPVATTPQDVFARSSIDSISNMLAKRALDVALREGL 639
            RE  RLLG   E+ LL   DT    FYR  A+EF R Q+SVDTF F+  YTD AS+G +S+++AGQVFYYP F+A  DG +   ++ H LTR TG+EAVMRVR ++G+R+ NFYG  F+RG DLLA+PN   + AF +ELE+  + L   S++ +Q+ALLYT    ERRI VHTLAVPV     +VF    +D++ N++AK AL+VAL+ GL
Sbjct:  457 REDTRLLGTDKEHNLLNAVDT----FYRKNAIEFCRQQVSVDTFLFAPQYTDFASLGCMSKYSAGQVFYYPNFSAPSDGDKFAAELRHCLTRETGWEAVMRVRATKGMRLSNFYGNSFLRGPDLLALPNVHRDAAFAIELEHN-DALLTASVICVQSALLYTTSCGERRIRVHTLAVPVTKLYAEVFRSVDVDAMCNLIAKNALEVALKSGL 663
[Close]
BLAST of mRNA_M-pyrifera_M_contig104233.910.1 vs. uniprot
Match: D7FPJ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPJ3_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 1.600e-57
Identity = 112/212 (52.83%), Postives = 149/212 (70.28%), Query Frame = 1 
Query:    4 REAPRLLGAADEYKLLGPEDTEDSMFYRSLAMEFSRVQISVDTFFFSASYTDVASVGAISRFTAGQVFYYPAFTAALDGHRLHGDVVHDLTRNTGFEAVMRVRTSRGLRVKNFYGAFFIRGQDLLAMPNATVNTAFNLELEYTAEHLKPGSIVTIQAALLYTNPESERRICVHTLAVPVATTPQDVFARSSIDSISNMLAKRALDVALREGL 639
            RE PR LG   E+ LL  E+     +Y++ A+EFS++QI VD F FS+ Y+DVA++  + +FTAGQ+FYYPAF A  DG + + ++   LTR T FEAVMRVR +RGLR+ NFYG +FIRG DLLA+PN T ++ F +E  Y  E L   S+V++QAALLYT    ERRI VH LA+PV T  Q+VF   SID + N+LAK+AL+V+L+ GL
Sbjct:  457 RENPRALGTDREHLLLKAENP----WYQNKAVEFSKLQICVDLFLFSSGYSDVATLVNLPKFTAGQLFYYPAFNAQSDGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYD-EQLLTASVVSVQAALLYTTSCGERRIRVHNLAIPVETVVQNVFDSVSIDVLCNILAKQALEVSLKSGL 663
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104233.910.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8D760_CAFRO1.220e-8464.95Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A7S1CB04_9STRA1.750e-6153.30Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A024TUF0_9STRA1.850e-6054.25Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A1V9YHI7_9STRA4.410e-6052.36Protein transporter Sec24 n=1 Tax=Achlya hypogyna ... [more]
T0QMG2_SAPDV4.210e-5952.36Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A1W0A274_9STRA6.800e-5950.47Transporter Sec24 (Fragment) n=1 Tax=Thraustotheca... [more]
W4GMY2_9STRA2.090e-5852.36Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A2D4BP64_PYTIN2.480e-5850.00Putative vesicle coat complex COPII subunit SEC24/... [more]
A0A067CH61_SAPPC6.920e-5851.89Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
D7FPJ3_ECTSI1.600e-5752.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104233contigM-pyrifera_M_contig104233:1..639 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score216.9
Seed ortholog evalue9.4e-54
Seed eggNOG ortholog157072.XP_008873355.1
Preferred nameSEC24B
KEGG koko:K14007
KEGG Pathwayko04141,map04141
KEGG ModuleM00404
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0002376,GO:0002474,GO:0002478,GO:0002495,GO:0002504,GO:0002791,GO:0002793,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005798,GO:0005829,GO:0006810,GO:0006886,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006914,GO:0006996,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009889,GO:0009987,GO:0010556,GO:0010869,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016236,GO:0019222,GO:0019882,GO:0019884,GO:0019886,GO:0022607,GO:0030117,GO:0030120,GO:0030127,GO:0030133,GO:0030134,GO:0030135,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031323,GO:0031410,GO:0031982,GO:0031984,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033218,GO:0034613,GO:0034622,GO:0035459,GO:0042175,GO:0042277,GO:0042592,GO:0042632,GO:0042886,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045714,GO:0046872,GO:0046907,GO:0046914,GO:0048002,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048475,GO:0048518,GO:0048522,GO:0048878,GO:0050708,GO:0050714,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051246,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051668,GO:0055088,GO:0055092,GO:0060255,GO:0061024,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070201,GO:0070727,GO:0070971,GO:0071702,GO:0071705,GO:0071840,GO:0080090,GO:0090087,GO:0090110,GO:0090114,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098827,GO:0098852,GO:1903530,GO:1903532,GO:1904951
EggNOG free text desc.ER to Golgi vesicle-mediated transport
EggNOG OGsCOG5028@1,KOG1985@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131
Exons1
Model size639
Cds size639
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815549.2331545-CDS-M-pyrifera_M_contig104233:0..6391622815549.2331545-CDS-M-pyrifera_M_contig104233:0..639Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104233 1..639 +
1692277459.0919867-CDS-M-pyrifera_M_contig104233:0..6391692277459.0919867-CDS-M-pyrifera_M_contig104233:0..639Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104233 1..639 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104233.910.1prot_M-pyrifera_M_contig104233.910.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig104233 1..639 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig104233.910.1

>prot_M-pyrifera_M_contig104233.910.1 ID=prot_M-pyrifera_M_contig104233.910.1|Name=mRNA_M-pyrifera_M_contig104233.910.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=213bp
MREAPRLLGAADEYKLLGPEDTEDSMFYRSLAMEFSRVQISVDTFFFSAS
YTDVASVGAISRFTAGQVFYYPAFTAALDGHRLHGDVVHDLTRNTGFEAV
MRVRTSRGLRVKNFYGAFFIRGQDLLAMPNATVNTAFNLELEYTAEHLKP
GSIVTIQAALLYTNPESERRICVHTLAVPVATTPQDVFARSSIDSISNML
AKRALDVALREGL
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mRNA from alignment at M-pyrifera_M_contig104233:1..639+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig104233.910.1 ID=mRNA_M-pyrifera_M_contig104233.910.1|Name=mRNA_M-pyrifera_M_contig104233.910.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=639bp|location=Sequence derived from alignment at M-pyrifera_M_contig104233:1..639+ (Macrocystis pyrifera P11B4 male)
ATGCGAGAAGCACCCAGGCTGCTGGGAGCAGCAGATGAGTACAAGCTCCT
GGGCCCCGAGGACACGGAAGACTCCATGTTCTACCGCTCCTTGGCCATGG
AGTTCTCCAGAGTGCAAATTTCCGTTGACACCTTCTTCTTCTCCGCGTCC
TACACTGACGTCGCTTCCGTGGGCGCCATTTCGAGGTTCACCGCGGGACA
AGTCTTCTACTACCCCGCCTTCACCGCAGCGCTCGACGGACACAGACTGC
ACGGAGACGTGGTGCATGACCTCACCCGCAACACCGGGTTTGAGGCGGTG
ATGCGAGTGCGAACGTCGCGTGGTTTGCGGGTGAAGAACTTTTACGGCGC
TTTTTTCATTCGAGGACAAGATTTGCTCGCCATGCCCAATGCCACAGTCA
ACACGGCCTTCAACCTGGAACTGGAGTACACGGCGGAGCACCTCAAGCCG
GGCTCCATCGTCACCATCCAAGCTGCGCTCTTGTACACCAACCCCGAGTC
AGAGCGTCGCATTTGCGTGCACACCTTGGCTGTTCCAGTCGCCACCACGC
CGCAGGACGTGTTCGCTCGCTCCTCCATCGACTCCATCTCCAACATGCTC
GCGAAGCGGGCGCTGGATGTGGCGCTGCGGGAAGGGTTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig104233:1..639+

>mRNA_M-pyrifera_M_contig104233.910.1 ID=mRNA_M-pyrifera_M_contig104233.910.1|Name=mRNA_M-pyrifera_M_contig104233.910.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1278bp|location=Sequence derived from alignment at M-pyrifera_M_contig104233:1..639+ (Macrocystis pyrifera P11B4 male)
ATGCGAGAAGCACCCAGGCTGCTGGGAGCAGCAGATGAGTACAAGCTCCT
GGGCCCCGAGGACACGGAAGACTCCATGTTCTACCGCTCCTTGGCCATGG
AGTTCTCCAGAGTGCAAATTTCCGTTGACACCTTCTTCTTCTCCGCGTCC
TACACTGACGTCGCTTCCGTGGGCGCCATTTCGAGGTTCACCGCGGGACA
AGTCTTCTACTACCCCGCCTTCACCGCAGCGCTCGACGGACACAGACTGC
ACGGAGACGTGGTGCATGACCTCACCCGCAACACCGGGTTTGAGGCGGTG
ATGCGAGTGCGAACGTCGCGTGGTTTGCGGGTGAAGAACTTTTACGGCGC
TTTTTTCATTCGAGGACAAGATTTGCTCGCCATGCCCAATGCCACAGTCA
ACACGGCCTTCAACCTGGAACTGGAGTACACGGCGGAGCACCTCAAGCCG
GGCTCCATCGTCACCATCCAAGCTGCGCTCTTGTACACCAACCCCGAGTC
AGAGCGTCGCATTTGCGTGCACACCTTGGCTGTTCCAGTCGCCACCACGC
CGCAGGACGTGTTCGCTCGCTCCTCCATCGACTCCATCTCCAACATGCTC
GCGAAGCGGGCGCTGGATGTGGCGCTGCGGGAAGGGTTGATGCGAGAAGC
ACCCAGGCTGCTGGGAGCAGCAGATGAGTACAAGCTCCTGGGCCCCGAGG
ACACGGAAGACTCCATGTTCTACCGCTCCTTGGCCATGGAGTTCTCCAGA
GTGCAAATTTCCGTTGACACCTTCTTCTTCTCCGCGTCCTACACTGACGT
CGCTTCCGTGGGCGCCATTTCGAGGTTCACCGCGGGACAAGTCTTCTACT
ACCCCGCCTTCACCGCAGCGCTCGACGGACACAGACTGCACGGAGACGTG
GTGCATGACCTCACCCGCAACACCGGGTTTGAGGCGGTGATGCGAGTGCG
AACGTCGCGTGGTTTGCGGGTGAAGAACTTTTACGGCGCTTTTTTCATTC
GAGGACAAGATTTGCTCGCCATGCCCAATGCCACAGTCAACACGGCCTTC
AACCTGGAACTGGAGTACACGGCGGAGCACCTCAAGCCGGGCTCCATCGT
CACCATCCAAGCTGCGCTCTTGTACACCAACCCCGAGTCAGAGCGTCGCA
TTTGCGTGCACACCTTGGCTGTTCCAGTCGCCACCACGCCGCAGGACGTG
TTCGCTCGCTCCTCCATCGACTCCATCTCCAACATGCTCGCGAAGCGGGC
GCTGGATGTGGCGCTGCGGGAAGGGTTG
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