mRNA_M-pyrifera_M_contig10415.895.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10415.895.1 vs. uniprot
Match: D7G7Z3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Z3_ECTSI) HSP 1 Score: 307 bits (786), Expect = 2.160e-100 Identity = 144/199 (72.36%), Postives = 167/199 (83.92%), Query Frame = 1 Query: 1 KCPDGLRDELVRTVFRLMGPIQDGHTHMFFKFQSSKFAPAVEKAWPSVKWVYLFRDPLEVMASNLKGAWRKVAPNASRNGTLP-LYNMGGPCVRGLKGRPKMAGGKQRQPSPQLMVDTCAKQLETLNEVALNQIESGSPNGLVVEYRQLPEVVSEYIYPEHFGMASTHAERAEFKQWMEPVTHIYSKGMATPQEPAVSK 594 +CPDGLR+ELVRTVFRLMGP+QDGHT +FFKFQSSKF PA+E+AWP KW+YLFRDPLEVM+SNLKGAWRK +A RN T P +YN+GGPCVRG KG GG ++ PSP+ +V TCAK LETLNE+AL QI GSPNGL VEYRQLPEV++EY+YP+H GMA T ER+EFK+WMEPVTH+YSKGMATP E AVSK Sbjct: 227 RCPDGLREELVRTVFRLMGPVQDGHTDLFFKFQSSKFLPAIEQAWPETKWIYLFRDPLEVMSSNLKGAWRKQVASAERNMTSPAVYNLGGPCVRGAKG-----GGSRKAPSPESLVTTCAKHLETLNEIALTQIVEGSPNGLAVEYRQLPEVMTEYVYPKHLGMAETEEERSEFKRWMEPVTHVYSKGMATPAEGAVSK 420
BLAST of mRNA_M-pyrifera_M_contig10415.895.1 vs. uniprot
Match: F2UI36_SALR5 (JmjC domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UI36_SALR5) HSP 1 Score: 87.8 bits (216), Expect = 1.090e-16 Identity = 67/195 (34.36%), Postives = 98/195 (50.26%), Query Frame = 1 Query: 4 CPDGLRD--ELVRTVFRLMGPIQDGHTHMFFKFQS--SKFAPAVEKAWPSVKWVYLFRDPLEVMASNLKG---AWRKVAPNASRNGTLPLYNMGGPCVRGLKGRPKMAGGKQRQPSPQLMVDTCAKQLETLNEVALNQIESGSPNGLVVEYRQLPEVVSEYIYPEHFGMASTHAERAEFKQWMEPVTHIYSKGMA 567 CP L + E++R + R M H +FFKFQS + P +A+P V W++++RDP+EVMAS+ K A KV ++N PL+ +R + PS + + CA L TL + AL+ ++S SPNG+ V Y LP+V+ ++P HFG T K+ M V YSKG A Sbjct: 176 CPAPLPEKAEMMRVLLRAMSN-SVRHKRLFFKFQSVNANAIPLYTEAFPEVPWMFVYRDPVEVMASHFKQKVPAGAKVPCLRAKNSPTPLHRR---YIR------------SKNPSDE---EFCAAHLATLCDSALHALDS-SPNGIAVNYHDLPDVLYTRVFPVHFGYTPT----PSVKRNMVNVAQEYSKGRA 346
BLAST of mRNA_M-pyrifera_M_contig10415.895.1 vs. uniprot
Match: A0A836CJX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX0_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 3.610e-16 Identity = 58/191 (30.37%), Postives = 86/191 (45.03%), Query Frame = 1 Query: 1 KCPDGLRDELVRTVFRLMGPIQDGHTHMFFKFQSSKFAPAVEKAWPSVKWVYLFRDPLEVMASNLKGAWRKVAPNASRNGTLPLYNMGG-----PCVRGLKGRPKMAGGKQRQPSPQLMVDTCAKQLETLNEVALNQIESGSPNGLVVEYRQLPEVVSEYIYPEHFGMASTHAERAEFKQWMEPVTHIYSK 558 K LR VR +FR + Q H FFK ++ +P WV+LFR+PL+V+ SN++GAW K S + L PC+R + G R +P++ CA L+ + A+ + LV++Y+ LPE V+EY++P HF ER +ME YSK Sbjct: 171 KASGELRVSEVRALFRALCFTQHHHDRCFFKLPGGTMLSQFQEVFPDTPWVFLFREPLDVVVSNMRGAWGKKELLYSEAASGQLIEKASKKAIAPCLR-----MPLPDGVTRDDAPEMR---CAGGLDKICRDAMAAARARPDLALVLDYKNLPEAVTEYLWPVHFRQGPARTERD--LPYMEEAGRAYSK 351
BLAST of mRNA_M-pyrifera_M_contig10415.895.1 vs. uniprot
Match: D7FT31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT31_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 7.390e-15 Identity = 55/194 (28.35%), Postives = 92/194 (47.42%), Query Frame = 1 Query: 4 CPDGLRDELVRTVFRLMGPIQDG--HTHMFFKFQSSKFAPAVEKAWPSVKWVYLFRDPLEVMASNL-------KGAWRKVAPNASRNGTLPLYNMGGPCVRGLKGRPKMAGGKQRQPSPQLMVDTCAKQLETLNEVALNQIESGSPNGLVVEYRQLPEVVSEYIYPEHFGMASTHAERAEFKQWMEPVTHIYSK 558 CP ++++V + +M + H H +FKFQSS+ AV A+P W+++FR+P+EVM S L +G ++VA R G P + +PK+ + + Q++ C K A++ E+ G++VEY LP + + P+H+G+ + AER M T +YSK Sbjct: 182 CPKCHKEQIVPWLRVIMDAMARSARHDHFYFKFQSSEDIDAVTSAYPDTPWIFIFREPIEVMMSRLGAQRIGMEGMEKEVAARVER-GMKPSK---------IPSKPKLGKPPKETSAAQVLAGLCKK--------AIHAFEANPGKGMMVEYPHLPHGILSTVLPDHYGVTVSEAERER----MMSTTQMYSK 353
BLAST of mRNA_M-pyrifera_M_contig10415.895.1 vs. uniprot
Match: A0A6H5KRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY1_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.340e-14 Identity = 56/194 (28.87%), Postives = 91/194 (46.91%), Query Frame = 1 Query: 4 CPDGLRDELVRTVFRLMGPIQDG--HTHMFFKFQSSKFAPAVEKAWPSVKWVYLFRDPLEVMASNL-------KGAWRKVAPNASRNGTLPLYNMGGPCVRGLKGRPKMAGGKQRQPSPQLMVDTCAKQLETLNEVALNQIESGSPNGLVVEYRQLPEVVSEYIYPEHFGMASTHAERAEFKQWMEPVTHIYSK 558 CP ++++V + +M + H H +FKFQSS+ AV A+P W+++FR+P+EVM S L +G ++VA R G P + +PK+ + + QL+ C K A++ E G++VEY LP + + P+H+G+ + AER M T +YSK Sbjct: 315 CPKCHKEQIVPWLRVIMDAMTRSARHKHFYFKFQSSEDIDAVTSAYPDTPWIFIFREPIEVMMSRLGAQRIGMEGMEKEVAARVER-GMKPSK---------ILSKPKLGKPPKETSAAQLLAGLCKK--------AIHAFEENPGKGMMVEYPHLPHGIVSTVLPDHYGVTVSEAERER----MMTSTQMYSK 486
BLAST of mRNA_M-pyrifera_M_contig10415.895.1 vs. uniprot
Match: A0A6H5K3E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E4_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 1.390e-14 Identity = 37/70 (52.86%), Postives = 49/70 (70.00%), Query Frame = 1 Query: 4 CPDGLRDELVRTVFRLMGPIQDGHTHMFFKFQSSKFAPAVEKAWPSVKWVYLFRDPLEVMASNLKGAWRK 213 C + + L+R + L+G ++GH H+FFKFQ S P + KA+P V WVYLFRDP+EVM SNLKGA+ K Sbjct: 278 CTEMQKVALLREIMTLLGNGRNGHEHLFFKFQDSTTLPLMMKAYPEVGWVYLFRDPVEVMVSNLKGAYGK 347
BLAST of mRNA_M-pyrifera_M_contig10415.895.1 vs. uniprot
Match: A0A7S2S3F9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S3F9_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.500e-14 Identity = 59/182 (32.42%), Postives = 93/182 (51.10%), Query Frame = 1 Query: 25 ELVRTVFRLMGPIQDG-HTHMFFKFQS--SKFAPAVEKAWPSVKWVYLFRDPLEVMASNLKGAWRKVAPNASRNGTLPLYNMGGPCVRGLKGRPKMAGGKQRQPSPQLMVDTCAKQLETLNEVALNQIESGSPNGLVVEYRQLPEVVSEYIYPEHFGMASTHAERAEFKQWMEPVTHIYSKG 561 +L R V +MG D ++FFK QS +K+ A+P V W++++RDP++VM S+LK + N R ++P ++ + KG K K+ P Q CA L TL E A++ ++S G V Y LP ++ + I PEHFG+ + A+RA + ++ YSKG Sbjct: 224 QLFRDVVYMMGRTNDAKEQNLFFKIQSVGTKYIDIARMAFPEVPWIFVYRDPVQVMMSHLKYGPHRA--NCVRQLSIPPTHL--KTILDGKGLTK----KKMTPEHQ-----CAIHLNTLCESAVSSLQSSPSYGKAVNYNLLPGILVDSIVPEHFGVPLSSADRARITE----ISSTYSKG 388
BLAST of mRNA_M-pyrifera_M_contig10415.895.1 vs. uniprot
Match: A0A835YUK0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUK0_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 6.920e-13 Identity = 56/192 (29.17%), Postives = 91/192 (47.40%), Query Frame = 1 Query: 19 RDELVRTVFRLMGPIQDGHTHMFFKFQSSKFAPAVEKAWPSVKWVYLFRDPLEVMASNLKGAWRK--VAPNASRNGTL-----PLYNMGGPCVRGLKGRPKMAGGKQRQPSPQLMVDTCAKQLETLNEVALNQIESGSPNGLVVEYRQLPEVVSEYIYPEHFGMASTHAERAEFKQWMEPVTHIYSKGMATP 573 R ++++TV R + G + F KF S+ + + A+P+ W++LFR P E++AS L G W K V +GT+ P PC+ ++R C + L L AL + S SP GL V+Y LP+VV+++++ EHFG ++ A A ++ + +YSK P Sbjct: 257 RADVIQTVVRSLCHTSHGRSACFIKFPSAFYLSDLLTAFPTTPWIFLFRQPSEILASQLGGQWSKHDVFYEKRDDGTVVQVAEPPRK---PCLMWAIDYGGAVSTEER----------CVRGLSVLCREALAALRS-SPAGLAVDYATLPDVVADHLWTEHFGQSA--AALAHDAPYLSEASRVYSKANKQP 432
BLAST of mRNA_M-pyrifera_M_contig10415.895.1 vs. uniprot
Match: D7G7C8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C8_ECTSI) HSP 1 Score: 75.5 bits (184), Expect = 1.770e-12 Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 1 Query: 4 CPDGLRDELVRTVFRLMGPIQDGHTHMFFKFQSSKFAPAVEKAWPSVKWVYLFRDPLEVMASNLK 198 C + + L+R + L+G ++GH H+FFKFQ S P + KA+P V WVYLFRDP+EVM SNLK Sbjct: 154 CTEMQKVTLLREIMTLLGNGRNGHKHLFFKFQDSTTLPLMMKAYPEVGWVYLFRDPVEVMVSNLK 218
BLAST of mRNA_M-pyrifera_M_contig10415.895.1 vs. uniprot
Match: A0A835ZD42_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD42_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.750e-11 Identity = 59/177 (33.33%), Postives = 87/177 (49.15%), Query Frame = 1 Query: 1 KCPDGLRDELVRTVFRLMGPIQ---DGHTHMFFKFQSSKFAPAVEKAWPSVKWVYLFRDPLEVMASNLKGAWRKVAPNASRNGTLPLYNMGGPCVRGLKGRPKMAGG------KQRQPS----PQLMVDT---CAKQLETLNEVALNQIESGSPNGLVVEYRQLPEVVSEYIYPEHF 483 K + L ++ + V LM + + H +FFKF AP V +P V WVYLFRDP+EVM SN+ G AP R G VR + + K G + R+ S P++M + CA+ L +L++ A++ E+ ++YRQLPE V +Y+Y EHF Sbjct: 787 KMDEALFNKCFKGVLALMKRARGDAEPHERIFFKF-----APVVTSMFPDVPWVYLFRDPVEVMVSNI-GRGELAAP-CVREG-----------VRAARLQQKETGAGSDWLARTRRSSKALDPEVMENLGNICAEWLLSLDQAAIDAQEAHPSTAAFLDYRQLPEAVPKYLYTEHF 945 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10415.895.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10415.895.1 >prot_M-pyrifera_M_contig10415.895.1 ID=prot_M-pyrifera_M_contig10415.895.1|Name=mRNA_M-pyrifera_M_contig10415.895.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=198bp KCPDGLRDELVRTVFRLMGPIQDGHTHMFFKFQSSKFAPAVEKAWPSVKWback to top mRNA from alignment at M-pyrifera_M_contig10415:6926..10132+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10415.895.1 ID=mRNA_M-pyrifera_M_contig10415.895.1|Name=mRNA_M-pyrifera_M_contig10415.895.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3207bp|location=Sequence derived from alignment at M-pyrifera_M_contig10415:6926..10132+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10415:6926..10132+ >mRNA_M-pyrifera_M_contig10415.895.1 ID=mRNA_M-pyrifera_M_contig10415.895.1|Name=mRNA_M-pyrifera_M_contig10415.895.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1188bp|location=Sequence derived from alignment at M-pyrifera_M_contig10415:6926..10132+ (Macrocystis pyrifera P11B4 male)back to top |