mRNA_M-pyrifera_M_contig104097.878.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: A0A6A7FYI3_9CRUS (Ubiquitin-protein ligase, cullin 4 (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FYI3_9CRUS) HSP 1 Score: 131 bits (330), Expect = 5.600e-35 Identity = 65/143 (45.45%), Postives = 103/143 (72.03%), Query Frame = 1 Query: 52 EVEEVKRTMASLIMGRNPAMRVLLPDSKGPKLGPGAKYKVNEGFHSAHVRVRINQAQAKE*KKEKKETEERIAMDRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 480 + +E+KRT+ASL G++ RVLL K ++G ++VN+ + S R++IN Q KE ++EK +T +++ DR +QIDA++VRIMK+R +L HQ L++ V+ ++FP +P+D+K+RIE+LL R+YIERD DD Q Y+Y+A Sbjct: 115 DADELKRTLASLSTGKSKDSRVLLKKPKVREIGEEDLFRVNKDYQSKFFRIKINSIQIKETREEKDQTNKQVFQDRLYQIDASIVRIMKSRKTLSHQLLVSGVYEHLKFPAEPIDLKKRIESLLAREYIERDKDDPQTYNYLA 257
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: A0A1I7S6H2_BURXY ((pine wood nematode) hypothetical protein n=1 Tax=Bursaphelenchus xylophilus TaxID=6326 RepID=A0A1I7S6H2_BURXY) HSP 1 Score: 137 bits (346), Expect = 1.120e-34 Identity = 74/160 (46.25%), Postives = 105/160 (65.62%), Query Frame = 1 Query: 1 VSWEEVVAGLGVGEKEEEVEEVKRTMASLIMGRNPAMRVLLPDSKGPKLGPGAKYKVNEGFHSAHVRVRINQAQAKE*KKEKKETEERIAMDRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 480 VS++E+ + E E+KRT+ SL G+ MRVLL + KG +G ++ NE F+ R+RI+Q KE + E ++TEE++ DR +QIDAA+VRIMK R L H L+ ++ Q+RFP KP+D+KRRIE+L+DR+Y+ RD D QLYHYVA Sbjct: 628 VSYKEIEKATQIEES-----ELKRTLQSLACGK---MRVLLKEPKGKDIGNDDEFVFNENFNDRLYRIRISQVMMKETESEHRQTEEQVNQDRQYQIDAAIVRIMKTRKVLAHNLLLTELYNQLRFPAKPIDLKRRIESLIDREYVSRDKQDAQLYHYVA 779
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: A0A7S3LKG3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LKG3_9STRA) HSP 1 Score: 134 bits (336), Expect = 6.060e-34 Identity = 73/160 (45.62%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 1 VSWEEVVAGLGVGEKEEEVEEVKRTMASLIMGRNPAMRVLLPDSKGPKLGPGAKYKVNEGFHSAHVRVRINQAQAKE*KKEKKETEERIAMDRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 480 +++ E+ A G+ E EE++RT+ SL G+ +RVL + KG + K+ VN F S R++IN Q KE KE K+T E+I DR +QIDAAVVRIMKAR +L H L++ +F Q++FP KP D+K+RIE+L+DR+Y+ERD+ +T +Y Y+A Sbjct: 352 LTYSEIKARTGI-----EAEELRRTLQSLACGK---VRVLSKEPKGRDVADNDKFSVNTEFKSKAYRIKINSIQMKETAKENKDTHEKIFQDRQYQIDAAVVRIMKARKTLSHNLLVSELFKQLKFPAKPQDLKKRIESLIDREYLERDEQNTSIYKYLA 503
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: K7G6G0_PELSI (CULLIN_2 domain-containing protein n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7G6G0_PELSI) HSP 1 Score: 125 bits (315), Expect = 1.680e-33 Identity = 72/158 (45.57%), Postives = 102/158 (64.56%), Query Frame = 1 Query: 7 WEEVVAGLGVGEKEEEVEEVKRTMASLIMGRNPAMRVLLPDSKGPKLGPGAKYKVNEGFHSAHVRVRINQAQAKE*KKEKKETEERIAMDRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 480 +EE+ GV E E++RT+ SL G+ RVL+ + KG ++ G K+ N F R++INQ Q KE +E+ T ER+ DR +QIDAA+VRIMK R L H L++ ++ Q++FPVKP D+K+RIE+L+DRDY+ERD D+ YHYVA Sbjct: 40 FEEIKMATGV-----ENSELRRTLQSLACGK---ARVLIKNPKGKEVDDGDKFIFNGDFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKILCHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA 189
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: A0A7E6D8G3_9CHIR (cullin-4A-like n=1 Tax=Phyllostomus discolor TaxID=89673 RepID=A0A7E6D8G3_9CHIR) HSP 1 Score: 125 bits (315), Expect = 3.970e-33 Identity = 71/159 (44.65%), Postives = 103/159 (64.78%), Query Frame = 1 Query: 4 SWEEVVAGLGVGEKEEEVEEVKRTMASLIMGRNPAMRVLLPDSKGPKLGPGAKYKVNEGFHSAHVRVRINQAQAKE*KKEKKETEERIAMDRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 480 S+EE+ G+ E E++RT+ SL G+ +VL+ KG ++ G K+ N F R++INQ Q KE +E+ T ER+ DR +QIDAA+VRIMK R +L H L++ ++ Q++FPVKP D+K+RIE+L+DRDY+ERD D+ YHYVA Sbjct: 71 SFEEIKMATGI-----EDSELRRTLQSLACGK---AQVLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA 221
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: V4ANR1_LOTGI (CULLIN_2 domain-containing protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4ANR1_LOTGI) HSP 1 Score: 133 bits (334), Expect = 4.290e-33 Identity = 75/160 (46.88%), Postives = 105/160 (65.62%), Query Frame = 1 Query: 1 VSWEEVVAGLGVGEKEEEVEEVKRTMASLIMGRNPAMRVLLPDSKGPKLGPGAKYKVNEGFHSAHVRVRINQAQAKE*KKEKKETEERIAMDRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 480 +S+EE+ A + EE + +KRT+ SL G+ P +RVL KG + G K+ NE F R+RINQ Q KE +E T E++ DR +Q+DAA+VRIMK R +L H LI+ ++ Q++FPVKP D+K+RIE+L+DRDY+ERD D+ YHYVA Sbjct: 566 LSYEEIKAATAI---EESI--LKRTLQSLACGK-PTLRVLSKKPKGRDIEDGDKFYFNEEFKHPLFRIRINQVQMKETPEENTSTTEKVFHDRQYQVDAAIVRIMKTRKTLSHNLLISELYNQLKFPVKPTDLKKRIESLIDRDYMERDKDNPNSYHYVA 719
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: K9KCG9_HORSE (Cullin-4B-like protein (Fragment) n=2 Tax=Laurasiatheria TaxID=314145 RepID=K9KCG9_HORSE) HSP 1 Score: 124 bits (312), Expect = 4.620e-33 Identity = 70/159 (44.03%), Postives = 102/159 (64.15%), Query Frame = 1 Query: 4 SWEEVVAGLGVGEKEEEVEEVKRTMASLIMGRNPAMRVLLPDSKGPKLGPGAKYKVNEGFHSAHVRVRINQAQAKE*KKEKKETEERIAMDRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 480 S EE+ G+ E E++RT+ SL G+ RVL + KG + G K+ N+ F R++INQ Q KE +E+ T ER+ DR +QIDAA+VRIMK R +L H L++ V+ Q++FPVKP D+K+RIE+L+DRDY+ERD ++ Y+Y+A Sbjct: 38 SLEEIKQATGI-----EDGELRRTLQSLACGK---ARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA 188
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: A0A7S0SIL9_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SIL9_9CHLO) HSP 1 Score: 132 bits (331), Expect = 6.320e-33 Identity = 70/160 (43.75%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 1 VSWEEVVAGLGVGEKEEEVEEVKRTMASLIMGRNPAMRVLLPDSKGPKLGPGAKYKVNEGFHSAHVRVRINQAQAKE*KKEKKETEERIAMDRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 480 +S+EE+ A G+ E E++RT+ SL G+ +RVL + KG ++ G + VNE F+ R+++N Q KE E +T ER+ DR +QIDAA+VRIMK R +L HQ LI +F Q++FP KP D+K+RIE+L+DR+Y+ER+ ++ Q+Y+Y+A Sbjct: 433 MSFEEIRAATGI-----EDTELRRTLQSLACGK---VRVLSKEPKGREVDTGDMFSVNEAFNEKLYRIKVNSIQLKETVAENTQTHERVFQDRQYQIDAAIVRIMKTRKTLSHQLLIGEIFNQIQFPAKPADLKKRIESLIDREYLERERNNAQIYNYLA 584
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: R7TLY6_CAPTE (CULLIN_2 domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TLY6_CAPTE) HSP 1 Score: 132 bits (333), Expect = 6.360e-33 Identity = 73/165 (44.24%), Postives = 105/165 (63.64%), Query Frame = 1 Query: 4 SWEEVVAGLGVGEKEE------EVEEVKRTMASLIMGRNPAMRVLLPDSKGPKLGPGAKYKVNEGFHSAHVRVRINQAQAKE*KKEKKETEERIAMDRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 480 S+EE+ +G E E+ E++RT+ SL G+ RVLL KG + G +++ ++ F R++INQ Q KE ++E T ER+ DR +Q+DAA+VRIMK R +L H LIA +F Q++FPVKP D+K+RIE+L+DRDY+ERD + YHYVA Sbjct: 606 SFEEIKEFTKIGSHSEIVQRNAEIGELRRTLQSLACGK---ARVLLKSPKGKDVDDGDRFRCHDDFKHKLFRIKINQIQMKETQEENTNTTERVFQDRQYQVDAAIVRIMKMRKTLTHNTLIAELFNQLKFPVKPADLKKRIESLIDRDYMERDKEQANQYHYVA 767
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: A0A183ICT2_9BILA (CULLIN_2 domain-containing protein n=1 Tax=Soboliphyme baturini TaxID=241478 RepID=A0A183ICT2_9BILA) HSP 1 Score: 132 bits (333), Expect = 7.090e-33 Identity = 70/140 (50.00%), Postives = 98/140 (70.00%), Query Frame = 1 Query: 61 EVKRTMASLIMGRNPAMRVLLPDSKGPKLGPGAKYKVNEGFHSAHVRVRINQAQAKE*KKEKKETEERIAMDRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 480 E++RT+ SL G+ RV+L +G + G ++ NE F +R++INQ Q KE K+E ++T E+I DR +QIDAA+VRIMK R L H LI+ ++ Q+RFPVKPVD+KRRIE+L++RDY+ RD DD+ YHYVA Sbjct: 845 ELRRTLQSLACGK---FRVILKTPRGRDVDDGDRFIFNEKFDDKLIRIKINQIQMKETKQELQQTTEQIYQDRQYQIDAAIVRIMKMRKILSHNLLISELYSQLRFPVKPVDLKRRIESLIERDYMNRDTDDSNSYHYVA 981 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104097.878.1 >prot_M-pyrifera_M_contig104097.878.1 ID=prot_M-pyrifera_M_contig104097.878.1|Name=mRNA_M-pyrifera_M_contig104097.878.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=71bp MDRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALback to top mRNA from alignment at M-pyrifera_M_contig104097:57..539+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104097.878.1 ID=mRNA_M-pyrifera_M_contig104097.878.1|Name=mRNA_M-pyrifera_M_contig104097.878.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=483bp|location=Sequence derived from alignment at M-pyrifera_M_contig104097:57..539+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104097:57..539+ >mRNA_M-pyrifera_M_contig104097.878.1 ID=mRNA_M-pyrifera_M_contig104097.878.1|Name=mRNA_M-pyrifera_M_contig104097.878.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=426bp|location=Sequence derived from alignment at M-pyrifera_M_contig104097:57..539+ (Macrocystis pyrifera P11B4 male)back to top |