mRNA_M-pyrifera_M_contig104049.864.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig104049.864.1
Unique NamemRNA_M-pyrifera_M_contig104049.864.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig104049.864.1 vs. uniprot
Match: A0A2P6MXM5_9EUKA (Mucin 91C n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MXM5_9EUKA)

HSP 1 Score: 97.4 bits (241), Expect = 5.480e-21
Identity = 59/134 (44.03%), Postives = 77/134 (57.46%), Query Frame = 1 
Query:    1 ARWFFGFISHVETEYLLESQPPGTFLIRFSKSNPGSFALGFRMNNAQQPIMHILIKTVGVGVFALQA---RNGEVR-FNRISEVVNHYAKLLKQPLETLLPVKEWYNFGELSETESELFLTEAPNNAFLLRFDT 390
            A WF GF+S  ETE LLE QP GTFLIRFSKS PGSFA+G+    A+  I H LI       F ++    RN   R F  + EVV+ Y  LLK  L + L    W++ G+L+  E++  L  + N  +L+RF T
Sbjct:  231 AEWFHGFLSSAETEKLLEKQPCGTFLIRFSKSKPGSFAIGYVEGEAKPKITHTLIACAPPSGFKIEEAYQRNARGRLFASLYEVVDFYNYLLKFTLRSDLSRLSWFH-GDLTSAEADEMLANSDNGTYLVRFST 363
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BLAST of mRNA_M-pyrifera_M_contig104049.864.1 vs. uniprot
Match: A0A2P6NCR0_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NCR0_9EUKA)

HSP 1 Score: 90.5 bits (223), Expect = 1.460e-18
Identity = 47/128 (36.72%), Postives = 74/128 (57.81%), Query Frame = 1 
Query:    7 WFFGFISHVETEYLLESQPPGTFLIRFSKSNPGSFALGFRMNNAQQPIMHILIKTVGVGVFALQARNGEVRFNRISEVVNHYAKLLKQPLETLLPVKEWYNFGELSETESELFLTEAPNNAFLLRFDT 390
            WF GF+S  ET+  LESQP GTFL+RFS S PGSFALG      +  + H++I++   G   L++   E  F  + ++V +YA +L  P  + +    W+ FGE+   E++  L   P+  +++RF +
Sbjct:  251 WFHGFLSGEETKRFLESQPAGTFLVRFSSSKPGSFALGLAQRGGK--VNHVMIRSTPEGFVMLESGQ-ETLFASLDDIVAYYAPVLTSPFSSEILGASWF-FGEMDANEADNLLRGQPSGTYVIRFSS 374
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BLAST of mRNA_M-pyrifera_M_contig104049.864.1 vs. uniprot
Match: L8GGT2_ACACA (SH2 domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GGT2_ACACA)

HSP 1 Score: 87.8 bits (216), Expect = 1.190e-17
Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 1 
Query:    1 ARWFFGFISHVETEYLLESQPPGTFLIRFSKSNPGSFALGFRMNNAQQPIMHILIKTVGVGVFALQARNGEVR--FNRISEVVNHYAKLLKQPLETLLPVKEWYNFGELSETESELFLTEAPNNAFLLRF 384
            A WF GF++  E E LLE QP GTFLIRFS+S+ GSFAL F   + +  I+HILI++     F +    G+    F  + ++V+HY+  L+    + LP + W++ G++S  E+   L   P   FL+RF
Sbjct:  352 APWFHGFLTSREAELLLEDQPIGTFLIRFSRSSGGSFALAFVQEHRK--ILHILIQSCMPEGFKIDEEEGDKSKYFESLQDIVDHYSIFLQHSFTSELPRESWFH-GDVSPPEAIELLQGHPEGTFLIRF 478
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BLAST of mRNA_M-pyrifera_M_contig104049.864.1 vs. uniprot
Match: A0A2P6N769_9EUKA (Non-specific protein-tyrosine kinase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N769_9EUKA)

HSP 1 Score: 84.7 bits (208), Expect = 1.560e-16
Identity = 46/128 (35.94%), Postives = 76/128 (59.38%), Query Frame = 1 
Query:    7 WFFGFISHVETEYLLESQPPGTFLIRFSKSNPGSFALGFRMNNAQQPIMHILIKTVGVGVFALQARNGEVRFNRISEVVNHYAKLLKQPLETLLPVKEWYNFGELSETESELFLTEAPNNAFLLRFDT 390
            WF GFIS  ET++LL +QP GTFL+RFS +N G+FA+ +   N    +  ILI +  +    ++ ++ E  F  I E++++Y  +L  P + +LP + +Y  G++S TE+E  L +     F+ RF +
Sbjct:  913 WFCGFISKSETDHLLYNQPVGTFLVRFSATNAGAFAIAYVSTNG---VAQILISSDKMSGVVVKEQDFERYFPSIFELIDYYKSILTIPYDNILPFESFYE-GDMSRTEAEEALGQQAAGTFIARFSS 1036
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BLAST of mRNA_M-pyrifera_M_contig104049.864.1 vs. uniprot
Match: A0A7S1VIA1_9EUKA (Hypothetical protein n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VIA1_9EUKA)

HSP 1 Score: 80.9 bits (198), Expect = 3.190e-15
Identity = 47/129 (36.43%), Postives = 72/129 (55.81%), Query Frame = 1 
Query:    7 WFFGFISHVETEYLLESQPPGTFLIRFSKSNPGSFALGFRMNNAQQPIMHILIKTVGVGVFALQARNGEVR-FNRISEVVNHYAKLLKQPLETLLPVKEWYNFGELSETESELFLTEAPNNAFLLRFDT 390
            WF GFIS  E+E LL     G FL+RFSKS  GSFAL F+ N A   + HI+I++     F ++      + F  +  ++ +Y  +LKQP ++ L  + W+  G+L+  E+E  L +     FL+RF +
Sbjct:  389 WFHGFISARESELLLADAAEGVFLLRFSKSTTGSFALAFKSNAA---VSHIMIQSALPEGFKIREGKSTFKMFKSLEAIIKNYDFVLKQPFQSQLTAQPWFQ-GDLTAMETEDLLQDTRVGTFLIRFSS 513
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BLAST of mRNA_M-pyrifera_M_contig104049.864.1 vs. uniprot
Match: A0A2P6N978_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N978_9EUKA)

HSP 1 Score: 79.7 bits (195), Expect = 8.670e-15
Identity = 47/129 (36.43%), Postives = 73/129 (56.59%), Query Frame = 1 
Query:    4 RWFFGFISHVETEYLLESQPPGTFLIRFSKSNPGSFALGFRMNNAQQPIMHILIKTVG-VGVFALQARNGEVR-FNRISEVVNHYAKLLKQPLETLLPVKEWYNFGELSETESELFLTEAPNNAFLLRF 384
            +WF GF+S  E   LL  + PGTFL+RFS S PGSFA+ FR  +    + HIL+ ++  +G    +   G  R F  ++E+V +Y   LK+   + L  + W+  G+L+  E+E  L  +   +FL+RF
Sbjct:  856 QWFQGFLSSREAHLLLFCEDPGTFLVRFSNSRPGSFAIAFRTAST---VHHILVHSIQPMGCTVYEEIGGIQRMFKNVNEIVEYYKSYLKKAYSSGLAKERWFQ-GDLTSREAEELLQNSEIGSFLVRF 980
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BLAST of mRNA_M-pyrifera_M_contig104049.864.1 vs. uniprot
Match: A0A2P6N1H3_9EUKA (FYN/Yes-like tyrosine-protein kinase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N1H3_9EUKA)

HSP 1 Score: 76.3 bits (186), Expect = 1.360e-13
Identity = 48/129 (37.21%), Postives = 69/129 (53.49%), Query Frame = 1 
Query:    7 WFFGFISHVETEYLLESQPPGTFLIRFSKSNPGSFALGFRMNNAQQPIMHILIKTVGVGVFALQARNGEVR-FNRISEVVNHYAKLLKQPLETLLPVKEWYNFGELSETESELFLTEAPNNAFLLRFDT 390
            WF+GFIS  ET+  L  QP GTFLIRFS + PG+FALGF M   +  + HILIK      F +  ++   R F  + E+V++Y   L       LP + ++  G++S  E+           FL+RF +
Sbjct:  470 WFYGFISRQETDLFLRDQPNGTFLIRFSSTQPGAFALGFIMEGRE--VHHILIKADKPSGFVVTDQSSVGRHFPNLLELVDYYRLFLVHSFWNELPFEPFFE-GDISSAETIESFHGHLEGTFLVRFSS 595
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BLAST of mRNA_M-pyrifera_M_contig104049.864.1 vs. uniprot
Match: A0A7S1VQ07_9EUKA (Hypothetical protein n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VQ07_9EUKA)

HSP 1 Score: 74.7 bits (182), Expect = 4.750e-13
Identity = 45/127 (35.43%), Postives = 71/127 (55.91%), Query Frame = 1 
Query:    7 WFFGFISHVETEYLLESQPPGTFLIRFSKSNPGSFALGFRMNNAQQPIMHILIKTVGVGVFALQARNGEVR-FNRISEVVNHYAKLLKQPLETLLPVKEWYNFGELSETESELFLTEAPNNAFLLRF 384
            WF GF+S  +   LLE +P GT+++RFS + PGSF+L   M  AQ  + H++I T   G FA++  N + + F  +  +V+ Y  +L QP     P + W++ G++S  E+   L       FL+RF
Sbjct:  268 WFHGFLSRDDATKLLEVEPVGTYMVRFSSTKPGSFSLAHTM--AQGKVNHVIIHTRSNG-FAIREDNAKEKLFPTVQHLVDAYEGILVQPYMQTFPRQLWWH-GDISGDEASDLLKGRKPGTFLIRF 390
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BLAST of mRNA_M-pyrifera_M_contig104049.864.1 vs. uniprot
Match: A0A2P6NY99_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NY99_9EUKA)

HSP 1 Score: 62.8 bits (151), Expect = 7.170e-9
Identity = 39/133 (29.32%), Postives = 67/133 (50.38%), Query Frame = 1 
Query:    1 ARWFFGFISHVETEYLLESQPPGTFLIRFSKSNPGSFALGF--RMNNAQQPIMHILIKT-VGVGVFALQARNGEVRFNRISEVVNHYAK--LLKQPLETLLPVKEWYNFGELSETESELFLTEAPNNAFLLRF 384
            A WF G++S  ++  LL+ +PPGT+LIRFS S PG F L +  + N      + +  ++    G F   ++N  + F  I ++V  Y+   +L  P  +      W+ +G+++  E    L   P   F++RF
Sbjct:  706 APWFHGYLSGDDSMRLLDGEPPGTYLIRFSGSRPGLFVLDYITKTNKGTPSSVRLTGRSHQSGGGFTAPSKNKTIHFPTIHDMVKAYSDHGILSSPYSSKFASAPWF-WGDITSEECVRKLMGKPTGTFMIRF 837
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BLAST of mRNA_M-pyrifera_M_contig104049.864.1 vs. uniprot
Match: UPI000E1EC55B (SH2 domain-containing protein 2A n=1 Tax=Dromaius novaehollandiae TaxID=8790 RepID=UPI000E1EC55B)

HSP 1 Score: 57.4 bits (137), Expect = 1.530e-7
Identity = 39/111 (35.14%), Postives = 58/111 (52.25%), Query Frame = 1 
Query:    7 WFFGFISHVETEYLLESQPPGTFLIRFSKSNPGSFALGFRMNNAQQPIMHILIKTVGVGVFALQARNGEVRFN-RISEVVNHYAKLLKQPLETLLPVKEWYNFGELSETES 336
            WF GF+S  ETE LL+ QPPG FL+RFS+S  G F L +R    +    H +++ +  G +A+    GE   +  +++++ HYA     P   +L V       E S T S
Sbjct:   69 WFHGFVSRRETEQLLQDQPPGCFLVRFSESTVG-FVLSYR---GRDRCRHFILEQLADGRYAIL---GEPSAHAELADLLRHYAXAPVTPYHEVLTVPRGRVRAEPSPTGS 172
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104049.864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6MXM5_9EUKA5.480e-2144.03Mucin 91C n=1 Tax=Planoprotostelium fungivorum Tax... [more]
A0A2P6NCR0_9EUKA1.460e-1836.72Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
L8GGT2_ACACA1.190e-1739.23SH2 domain containing protein n=1 Tax=Acanthamoeba... [more]
A0A2P6N769_9EUKA1.560e-1635.94Non-specific protein-tyrosine kinase n=1 Tax=Plano... [more]
A0A7S1VIA1_9EUKA3.190e-1536.43Hypothetical protein n=1 Tax=Sexangularia sp. CB-2... [more]
A0A2P6N978_9EUKA8.670e-1536.43Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A2P6N1H3_9EUKA1.360e-1337.21FYN/Yes-like tyrosine-protein kinase n=1 Tax=Plano... [more]
A0A7S1VQ07_9EUKA4.750e-1335.43Hypothetical protein n=1 Tax=Sexangularia sp. CB-2... [more]
A0A2P6NY99_9EUKA7.170e-929.32Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
UPI000E1EC55B1.530e-735.14SH2 domain-containing protein 2A n=1 Tax=Dromaius ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104049contigM-pyrifera_M_contig104049:193..638 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score62.8
Seed ortholog evalue1.4e-07
Seed eggNOG ortholog106582.XP_004566998.1
Preferred namePTPN11
KEGG koko:K07293
KEGG Pathwayko04013,ko04014,ko04072,ko04360,ko04630,ko04650,ko04670,ko04722,ko04920,ko04931,ko05120,ko05168,ko05205,ko05211,ko05220,map04013,map04014,map04072,map04360,map04630,map04650,map04670,map04722,map04920,map04931,map05120,map05168,map05205,map05211,map05220
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000077,GO:0000187,GO:0000278,GO:0000902,GO:0000904,GO:0001501,GO:0001664,GO:0001667,GO:0001775,GO:0001784,GO:0001894,GO:0001932,GO:0001934,GO:0001959,GO:0002376,GO:0002520,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002791,GO:0002792,GO:0003006,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0004726,GO:0005070,GO:0005102,GO:0005158,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006464,GO:0006470,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006644,GO:0006650,GO:0006661,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006935,GO:0006950,GO:0006974,GO:0007049,GO:0007154,GO:0007162,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007173,GO:0007229,GO:0007275,GO:0007346,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0007548,GO:0007596,GO:0007599,GO:0008150,GO:0008152,GO:0008543,GO:0008610,GO:0008654,GO:0009058,GO:0009605,GO:0009611,GO:0009612,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010001,GO:0010033,GO:0010171,GO:0010562,GO:0010604,GO:0010631,GO:0010646,GO:0010647,GO:0010648,GO:0010817,GO:0010827,GO:0010828,GO:0016043,GO:0016301,GO:0016303,GO:0016310,GO:0016311,GO:0016477,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0019220,GO:0019221,GO:0019222,GO:0019538,GO:0019637,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0021549,GO:0021575,GO:0021587,GO:0021695,GO:0021696,GO:0021697,GO:0022008,GO:0022037,GO:0022407,GO:0022409,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030030,GO:0030097,GO:0030099,GO:0030154,GO:0030155,GO:0030168,GO:0030182,GO:0030219,GO:0030220,GO:0030258,GO:0030674,GO:0030902,GO:0030971,GO:0031175,GO:0031294,GO:0031295,GO:0031323,GO:0031325,GO:0031347,GO:0031399,GO:0031401,GO:0031570,GO:0031748,GO:0031974,GO:0031981,GO:0032147,GO:0032268,GO:0032270,GO:0032368,GO:0032369,GO:0032386,GO:0032501,GO:0032502,GO:0032504,GO:0032528,GO:0032870,GO:0032879,GO:0032880,GO:0032989,GO:0032990,GO:0032991,GO:0033157,GO:0033277,GO:0033500,GO:0033554,GO:0033628,GO:0033629,GO:0033674,GO:0034097,GO:0034762,GO:0034764,GO:0035004,GO:0035264,GO:0035265,GO:0035335,GO:0035591,GO:0035855,GO:0036092,GO:0036211,GO:0036302,GO:0036344,GO:0038127,GO:0038179,GO:0040007,GO:0040008,GO:0040011,GO:0040014,GO:0042060,GO:0042063,GO:0042221,GO:0042325,GO:0042327,GO:0042330,GO:0042445,GO:0042578,GO:0042592,GO:0042593,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043274,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043549,GO:0043560,GO:0043583,GO:0044057,GO:0044060,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045017,GO:0045088,GO:0045309,GO:0045785,GO:0045786,GO:0045787,GO:0045859,GO:0045860,GO:0045931,GO:0045937,GO:0046324,GO:0046326,GO:0046474,GO:0046486,GO:0046488,GO:0046676,GO:0046822,GO:0046825,GO:0046834,GO:0046854,GO:0046883,GO:0046887,GO:0046888,GO:0046934,GO:0048008,GO:0048011,GO:0048013,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0048608,GO:0048609,GO:0048638,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048708,GO:0048731,GO:0048806,GO:0048812,GO:0048839,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0048871,GO:0048872,GO:0048873,GO:0048878,GO:0050708,GO:0050709,GO:0050776,GO:0050780,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050796,GO:0050817,GO:0050839,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050878,GO:0050896,GO:0050900,GO:0051046,GO:0051047,GO:0051048,GO:0051049,GO:0051050,GO:0051051,GO:0051128,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051219,GO:0051223,GO:0051224,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051249,GO:0051251,GO:0051338,GO:0051347,GO:0051427,GO:0051428,GO:0051462,GO:0051463,GO:0051674,GO:0051716,GO:0051726,GO:0051896,GO:0051897,GO:0052742,GO:0052813,GO:0060020,GO:0060090,GO:0060123,GO:0060125,GO:0060249,GO:0060255,GO:0060322,GO:0060323,GO:0060324,GO:0060325,GO:0060338,GO:0060341,GO:0060348,GO:0060759,GO:0061458,GO:0061515,GO:0061564,GO:0061582,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070102,GO:0070201,GO:0070372,GO:0070374,GO:0070741,GO:0070848,GO:0070849,GO:0070887,GO:0071214,GO:0071260,GO:0071310,GO:0071345,GO:0071354,GO:0071363,GO:0071364,GO:0071495,GO:0071496,GO:0071704,GO:0071774,GO:0071840,GO:0071900,GO:0071902,GO:0072359,GO:0080090,GO:0080134,GO:0090087,GO:0090130,GO:0090132,GO:0090276,GO:0090278,GO:0090407,GO:0097485,GO:0098751,GO:0104004,GO:0120036,GO:0120039,GO:0140096,GO:1900076,GO:1900078,GO:1901564,GO:1901576,GO:1902531,GO:1902533,GO:1903037,GO:1903039,GO:1903530,GO:1903531,GO:1903532,GO:1903827,GO:1904950,GO:1905952,GO:1905953,GO:1990782,GO:2000831,GO:2000832,GO:2000846,GO:2000847,GO:2000849,GO:2000850,GO:2001023,GO:2001024,GO:2001273,GO:2001275
EggNOG free text desc.phosphatase, non-receptor type 11
EggNOG OGs39S7A@33154,3BCJ0@33208,3CUJE@33213,48269@7711,490ME@7742,49RRA@7898,COG5599@1,KOG0790@2759
EC3.1.3.48
COG Functional cat.T
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009
Exons2
Model size390
Cds size390
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815546.8556137-CDS-M-pyrifera_M_contig104049:192..3681622815546.8556137-CDS-M-pyrifera_M_contig104049:192..368Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104049 193..368 +
1692277458.1362438-CDS-M-pyrifera_M_contig104049:192..3681692277458.1362438-CDS-M-pyrifera_M_contig104049:192..368Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104049 193..368 +
1622815546.8665519-CDS-M-pyrifera_M_contig104049:424..6381622815546.8665519-CDS-M-pyrifera_M_contig104049:424..638Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104049 425..638 +
1692277458.1517367-CDS-M-pyrifera_M_contig104049:424..6381692277458.1517367-CDS-M-pyrifera_M_contig104049:424..638Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104049 425..638 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104049.864.1prot_M-pyrifera_M_contig104049.864.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig104049 193..638 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig104049.864.1

>prot_M-pyrifera_M_contig104049.864.1 ID=prot_M-pyrifera_M_contig104049.864.1|Name=mRNA_M-pyrifera_M_contig104049.864.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp
ARWFFGFISHVETEYLLESQPPGTFLIRFSKSNPGSFALGFRMNNAQQPI
MHILIKTVGVGVFALQARNGEVRFNRISEVVNHYAKLLKQPLETLLPVKE
WYNFGELSETESELFLTEAPNNAFLLRFDT
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mRNA from alignment at M-pyrifera_M_contig104049:193..638+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig104049.864.1 ID=mRNA_M-pyrifera_M_contig104049.864.1|Name=mRNA_M-pyrifera_M_contig104049.864.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=446bp|location=Sequence derived from alignment at M-pyrifera_M_contig104049:193..638+ (Macrocystis pyrifera P11B4 male)
GCCAGATGGTTCTTCGGCTTCATCTCGCACGTCGAGACGGAGTACCTGCT
TGAGAGCCAGCCGCCAGGGACGTTCCTCATCCGTTTCTCAAAGTCCAACC
CCGGCTCCTTTGCCCTGGGCTTCCGCATGAACAACGCCCAGCAGCCCATC
ATGCACATCCTCATCAAGACCGTGGGGTACGCTCGCCGGCTCGAAGCTCG
CTATTTGCCTTGTGCTGACGTGGCTCCACCAGTGTGGGAGTCTTTGCTCT
GCAGGCCAGGAATGGAGAAGTGCGCTTCAACCGCATCAGCGAGGTGGTGA
ACCATTACGCAAAGCTCCTCAAGCAGCCGCTCGAGACCCTCCTGCCCGTG
AAGGAGTGGTACAACTTTGGAGAGCTCTCGGAAACGGAGTCGGAGCTCTT
CCTTACGGAGGCGCCCAACAACGCCTTCCTCCTGCGCTTCGACACC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig104049:193..638+

>mRNA_M-pyrifera_M_contig104049.864.1 ID=mRNA_M-pyrifera_M_contig104049.864.1|Name=mRNA_M-pyrifera_M_contig104049.864.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig104049:193..638+ (Macrocystis pyrifera P11B4 male)
GCCAGATGGTTCTTCGGCTTCATCTCGCACGTCGAGACGGAGTACCTGCT
TGAGAGCCAGCCGCCAGGGACGTTCCTCATCCGTTTCTCAAAGTCCAACC
CCGGCTCCTTTGCCCTGGGCTTCCGCATGAACAACGCCCAGCAGCCCATC
ATGCACATCCTCATCAAGACCGTGGGGCCAGATGGTTCTTCGGCTTCATC
TCGCACGTCGAGACGGAGTACCTGCTTGAGAGCCAGCCGCCAGGGACGTT
CCTCATCCGTTTCTCAAAGTCCAACCCCGGCTCCTTTGCCCTGGGCTTCC
GCATGAACAACGCCCAGCAGCCCATCATGCACATCCTCATCAAGACCGTG
GGTGTGGGAGTCTTTGCTCTGCAGGCCAGGAATGGAGAAGTGCGCTTCAA
CCGCATCAGCGAGGTGGTGAACCATTACGCAAAGCTCCTCAAGCAGCCGC
TCGAGACCCTCCTGCCCGTGAAGGAGTGGTACAACTTTGGAGAGCTCTCG
GAAACGGAGTCGGAGCTCTTCCTTACGGAGGCGCCCAACAACGCCTTCCT
CCTGCGCTTCGACACCTGTGGGAGTCTTTGCTCTGCAGGCCAGGAATGGA
GAAGTGCGCTTCAACCGCATCAGCGAGGTGGTGAACCATTACGCAAAGCT
CCTCAAGCAGCCGCTCGAGACCCTCCTGCCCGTGAAGGAGTGGTACAACT
TTGGAGAGCTCTCGGAAACGGAGTCGGAGCTCTTCCTTACGGAGGCGCCC
AACAACGCCTTCCTCCTGCGCTTCGACACC
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