mRNA_M-pyrifera_M_contig103981.845.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103981.845.1 vs. uniprot
Match: UPI001C99AB1E (putative DNA binding domain-containing protein n=1 Tax=Membranicola marinus TaxID=1227546 RepID=UPI001C99AB1E) HSP 1 Score: 270 bits (690), Expect = 1.600e-86 Identity = 124/214 (57.94%), Postives = 171/214 (79.91%), Query Frame = 1 Query: 1 EWVEFKHNHLSPEEIGRYLSALSNGACLQRQEYGYLLFGINDASYEILGTDFSPSKQKVKNEELENWLVNRLSPKIDFQIEEYNVGEKKLALFVVPAAHNQPVEFLNMPYVRVGSATRKLSDFPEKAKKIWRGKKEKSFELQVAMEHLSTSEVVALLDTQSYFELMNQPYPSDQEGVLQKFLSEKLVTKSKTGYSITNLGAILFAKKLSSFEGM 642 EWVEFKHN+ S EEIG+ +SALSNGAC+ RQ+YGYL+FG+ D S++I+GT F K KNE+ E+WLV RL+P+IDF+I+E++ K +++FV+PA HNQPVEF++ Y+RV ++TRKL++FPEKA+KIW+ K FE ++A E+LST+ ++ LL+TQSYFEL + PYPSD+ GVL++FLSE +TK +T Y+ITNLGAILFAK L+ F + Sbjct: 21 EWVEFKHNYHSTEEIGKIISALSNGACIHRQDYGYLVFGVEDDSHQIIGTTFKARTAKYKNEDKEHWLVQRLNPRIDFEIQEFDYNRKHISMFVIPATHNQPVEFMHTAYIRVATSTRKLNEFPEKARKIWKKGPVKIFEERIAKENLSTNNIIELLNTQSYFELFSIPYPSDRAGVLERFLSEGFITKDQTTYNITNLGAILFAKDLNDFSSL 234
BLAST of mRNA_M-pyrifera_M_contig103981.845.1 vs. uniprot
Match: A0A136NJF7_9BACT (LexA DNA-binding protein n=1 Tax=Bacteroidetes bacterium OLB10 TaxID=1617421 RepID=A0A136NJF7_9BACT) HSP 1 Score: 258 bits (659), Expect = 7.840e-82 Identity = 125/215 (58.14%), Postives = 166/215 (77.21%), Query Frame = 1 Query: 1 EWVEFKHNHLSPEEIGRYLSALSNGACLQRQEYGYLLFGINDASYEILGTDFSPSKQKVKNEELENWLVNRLSPKIDFQIEEYNV-GEKKLALFVVPAAHNQPVEFLNMPYVRVGSATRKLSDFPEKAKKIWRGKKEKSFELQVAMEHLSTSEVVALLDTQSYFELMNQPYPSDQEGVLQKFLSEKLVTKSKTGYSITNLGAILFAKKLSSFEGM 642 EWVEFK N+ S EEIG +SALSNGAC+ Q +GYL+FG+ D ++ I GT F K NEELE+WL RL P+IDF+I E+ ++ + LFV+P AHN+PV+FL+ PY+RVGS TRKLSDFPEK +KIWR K K +EL++A ++LS S+V+ LL T++YF+LM PYPS+Q+GV++KF++E LV KS+ GY+ITNLGAILFAK L+ FEG+ Sbjct: 21 EWVEFKQNYHSAEEIGERISALSNGACIHNQAFGYLIFGVEDKTHIITGTTFKAKSTKKGNEELEHWLAQRLDPRIDFRIHEFAYDAQRNITLFVIPCAHNKPVDFLHTPYIRVGSITRKLSDFPEKERKIWR-KSSKPYELEIAKDNLSASDVIRLLSTETYFDLMKLPYPSNQDGVIEKFINENLVVKSQ-GYAITNLGAILFAKNLTEFEGV 233
BLAST of mRNA_M-pyrifera_M_contig103981.845.1 vs. uniprot
Match: A0A7C1S8K2_9FLAO (Transcriptional regulator n=1 Tax=Leeuwenhoekiella sp. TaxID=1977054 RepID=A0A7C1S8K2_9FLAO) HSP 1 Score: 258 bits (660), Expect = 4.830e-81 Identity = 118/212 (55.66%), Postives = 166/212 (78.30%), Query Frame = 1 Query: 1 EWVEFKHNHLSPEEIGRYLSALSNGACLQRQEYGYLLFGINDASYEILGTDFSPSKQKVKNEELENWLVNRLSPKIDFQIEEYNVGEKKLALFVVPAAHNQPVEFLNMPYVRVGSATRKLSDFPEKAKKIWRGKKEKSFELQVAMEHLSTSEVVALLDTQSYFELMNQPYPSDQEGVLQKFLSEKLVTKSKTGYSITNLGAILFAKKLSSFE 636 EW+EFK N+ P EIG+ +SALSNGAC+ Q+YGYL++G+ D S++I+G+ F QK NEELE+WL+ RL+P+IDF I++ N+ +K + +F++P+AHNQPVEF + YVR+GS TR+LS+FPEKA+KIW+ K FEL++A E +S S++V LL TQ+YFEL+N PYPS ++GVL+KF+SE + K+K+ Y ITNLGAIL AK L++F Sbjct: 21 EWIEFKKNNSDPVEIGKRISALSNGACIHNQDYGYLVYGVEDDSHKIVGSSFKCKLQKKGNEELEHWLIQRLNPRIDFTIKQINIEDKNICIFIIPSAHNQPVEFTHKAYVRIGSITRELSEFPEKARKIWKKGNSKVFELRIAQESISGSDIVELLSTQTYFELLNIPYPSSRDGVLKKFVSEDFIIKNKSKYHITNLGAILLAKDLNNFS 232
BLAST of mRNA_M-pyrifera_M_contig103981.845.1 vs. uniprot
Match: A0A150XP19_9BACT (Transcriptional regulator n=1 Tax=Roseivirga seohaensis TaxID=1914963 RepID=A0A150XP19_9BACT) HSP 1 Score: 248 bits (634), Expect = 3.720e-77 Identity = 123/216 (56.94%), Postives = 166/216 (76.85%), Query Frame = 1 Query: 1 EWVEFKHNHLSPEEIGRYLSALSNGACLQRQEYGYLLFGINDASYEILGTDFSPSKQKVKNEELENWLVNRLSPKIDFQIEEYNVGEKK-LALFVVPAAHNQPVEFLNMPYVRVGSATRKLSDFPEKAKKIWRGKKEKSFELQVAMEHLSTSEVVALLDTQSYFELMNQPYPSDQEGVLQKFLSEKLVTKSKTGYSITNLGAILFAKKLSSFEGMD 645 EWVEFK N SPEEIG +SAL+NGA +Q Q++GYL+FG+ D ++ I GT F P K NEELE+WL RL P+IDF+I E+ + + +A+FV+PAA N+PV+FL+ Y+RVGS TRKLS+FPEK KIWR KK K +E ++A ++L+ S+V+ LL T++YF+LM PYPS+QEGV+QKF+ EKL+ KS+ Y++TNLGAILFAK LS FE ++ Sbjct: 21 EWVEFKLNFHSPEEIGERISALANGAAIQNQDFGYLVFGVEDKTHLIKGTIFKPKTHKKGNEELEHWLAQRLDPRIDFRIYEFAYDDSRHMAVFVIPAAQNRPVDFLHNAYIRVGSITRKLSEFPEKEAKIWR-KKVKPYEQEIARDNLNASDVIRLLSTETYFDLMKLPYPSNQEGVIQKFIDEKLIVKSRR-YAVTNLGAILFAKSLSEFESVE 234
BLAST of mRNA_M-pyrifera_M_contig103981.845.1 vs. uniprot
Match: A0A4Z0FFQ4_9FLAO (Transcriptional regulator n=3 Tax=Flavobacterium columnare TaxID=996 RepID=A0A4Z0FFQ4_9FLAO) HSP 1 Score: 248 bits (632), Expect = 7.230e-77 Identity = 120/214 (56.07%), Postives = 159/214 (74.30%), Query Frame = 1 Query: 1 EWVEFKHNHLSPEEIGRYLSALSNGACLQRQEYGYLLFGINDASYEILGTDFSPSKQKVKNEELENWLVNRLSPKIDFQIEEYNVGEKKLALFVVPAAHNQPVEFLNMPYVRVGSATRKLSDFPEKAKKIWRGKKEKSFELQVAMEHLSTSEVVALLDTQSYFELMNQPYPSDQEGVLQKFLSEKLVTKSKTGYSITNLGAILFAKKLSSFEGM 642 EWVEFK N S EIG +SALSNGA + Q++GYL+FGI D ++ GT+FSP K K NEELENWL+ RL+P+IDF+I E EK + LFV+PAA N+PV+FL+ PY+R+GS TRKL DFPEK +KIW+ K +K FEL++A + LS +V+ LL T++YF+L+ PYP+ + GV+ K + EKL+ KS GY+ITNLGAILFAK L F+ + Sbjct: 21 EWVEFKENFHSENEIGERISALSNGASIHNQDFGYLVFGIEDVTHIAKGTNFSPKKHKKGNEELENWLIQRLNPRIDFRIYEIKYKEKNIVLFVIPAAKNEPVDFLHTPYIRIGSITRKLMDFPEKERKIWQ-KTDKPFELEIAKDKLSADDVIKLLSTETYFDLIGIPYPTSRSGVIDKLIKEKLIVKSN-GYAITNLGAILFAKNLPDFDSV 232
BLAST of mRNA_M-pyrifera_M_contig103981.845.1 vs. uniprot
Match: A0A6H0T4T2_9PAST (Transcriptional regulator n=1 Tax=Pasteurellaceae bacterium RH1A TaxID=1823760 RepID=A0A6H0T4T2_9PAST) HSP 1 Score: 246 bits (628), Expect = 3.710e-76 Identity = 123/220 (55.91%), Postives = 157/220 (71.36%), Query Frame = 1 Query: 1 EWVEFKHNHLSPEEIGRYLSALSNGACLQRQEYGYLLFGINDASYEILGTDFSP-------SKQKVKNEELENWLVNRLSPKIDFQIEEYNVGEKKLALFVVPAAHNQPVEFLNMPYVRVGSATRKLSDFPEKAKKIWRGKKEKSFELQVAMEHLSTSEVVALLDTQSYFELMNQPYPSDQEGVLQKFLSEKLV-TKSKTGYSITNLGAILFAKKLSSFE 636 EW+EFKHN+ S EEIG +SALSN AC+ +Q + YL+FGI D ++ ILGT F P SK K EELE+WLV RL+P+IDF IEE+ K +ALF +PA +NQPVEF++ Y+RVGS TRKLSDFPEKA+KIW+ K FE ++A E +V+ LLD+QSYFELM QPYP++++ VL+KF SEK + Y ITNLGA+LFAK L +FE Sbjct: 21 EWLEFKHNYHSDEEIGERISALSNAACIYQQPFAYLVFGIEDKTHNILGTTFKPKSATVKSSKGKPSKEELEHWLVQRLNPRIDFTIEEFEYDGKLIALFKIPATYNQPVEFMHTAYIRVGSYTRKLSDFPEKARKIWKNNTSKVFEERIAWESADADKVIELLDSQSYFELMKQPYPTNRDSVLEKFTSEKFILANDDNSYDITNLGAMLFAKNLDNFE 240
BLAST of mRNA_M-pyrifera_M_contig103981.845.1 vs. uniprot
Match: A0A4V0IIJ1_9PAST (Putative transcriptional regulator n=1 Tax=Actinobacillus porcinus TaxID=51048 RepID=A0A4V0IIJ1_9PAST) HSP 1 Score: 244 bits (622), Expect = 2.930e-75 Identity = 120/220 (54.55%), Postives = 160/220 (72.73%), Query Frame = 1 Query: 1 EWVEFKHNHLSPEEIGRYLSALSNGACLQRQEYGYLLFGINDASYEILGTDFSPSKQKVKNE-------ELENWLVNRLSPKIDFQIEEYNVGEKKLALFVVPAAHNQPVEFLNMPYVRVGSATRKLSDFPEKAKKIWRGKKEKSFELQVAMEHLSTSEVVALLDTQSYFELMNQPYPSDQEGVLQKFLSEKLVTKSKTG-YSITNLGAILFAKKLSSFE 636 EW+EFK N+ S EIG +SALSN AC+ +Q Y YL+FG+ D ++ +LGT FSP K K E ELENWLV RL+P+IDF IEE+ G K +ALF +PA +NQPVEF + Y+RVGS TRKL++FPEKA+KIW+ FE ++A E++S +V+ LL+TQSYFELM PYP+D++GVL+KF +EK + + G Y ITNLGA+LFAK L++F+ Sbjct: 21 EWLEFKLNYHSDNEIGERISALSNSACIHQQAYAYLVFGVEDKTHSVLGTTFSPKSAKAKGEKGKESKEELENWLVQRLNPRIDFTIEEFEYGGKHIALFKIPATYNQPVEFSHTAYIRVGSYTRKLNEFPEKARKIWKNSTNNVFEERLAQENVSADQVIELLNTQSYFELMKIPYPTDRKGVLEKFCTEKFIHLNNDGSYDITNLGALLFAKDLNAFD 240
BLAST of mRNA_M-pyrifera_M_contig103981.845.1 vs. uniprot
Match: UPI0006BEC398 (putative DNA binding domain-containing protein n=1 Tax=Candidatus Symbiothrix dinenymphae TaxID=467085 RepID=UPI0006BEC398) HSP 1 Score: 241 bits (616), Expect = 1.890e-74 Identity = 121/215 (56.28%), Postives = 158/215 (73.49%), Query Frame = 1 Query: 1 EWVEFKHNHLSPEEIGRYLSALSNGACLQRQEYGYLLFGINDASYEILGTDFSPSKQKVKNEELENWLVNRLSPKIDFQIEEYNVGE-KKLALFVVPAAHNQPVEFLNMPYVRVGSATRKLSDFPEKAKKIWRGKKEKSFELQVAMEHLSTSEVVALLDTQSYFELMNQPYPSDQEGVLQKFLSEKLVTKSKTGYSITNLGAILFAKKLSSFEGM 642 EW+EFKHN SPEEIG +SALSN A L Q GYL+FGI + ++ +LGTDF K NEELENWL +RL+P+IDF IEE++ E K ++LF+VPAA N+PV FL+ Y+RVGS TRKL DF EK +KIW+ + E ++A LS SEV+ LL TQ+YFEL+ PYPS+Q GV++KF+SE+L+ K +GYSIT LGA+LFAK L+ F+ + Sbjct: 21 EWIEFKHNFHSPEEIGERISALSNTARLHNQTLGYLVFGIENETHRVLGTDFKAKSHKKGNEELENWLASRLNPRIDFTIEEFDYEEGKHISLFIVPAAKNRPVLFLHQAYIRVGSITRKLIDFEEKERKIWQNT-DYQLENEIAKSKLSASEVIDLLSTQTYFELLKIPYPSNQAGVIEKFISEQLIVKENSGYSITKLGALLFAKNLNDFDDL 234
BLAST of mRNA_M-pyrifera_M_contig103981.845.1 vs. uniprot
Match: UPI001FE967B4 (putative DNA binding domain-containing protein n=1 Tax=Cloacibacterium caeni TaxID=2004710 RepID=UPI001FE967B4) HSP 1 Score: 239 bits (609), Expect = 2.060e-74 Identity = 114/216 (52.78%), Postives = 160/216 (74.07%), Query Frame = 1 Query: 1 EWVEFKHNHLSPEEIGRYLSALSNGACLQRQEYGYLLFGINDASYEILGTDFSPSKQKVK-NEELENWLVNRLSPKIDFQIEEYNVGEKKLALFVVPAAHNQPVEFLNMPYVRVGSATRKLSDFPEKAKKIWRGKKEKSFELQVAMEHLSTSEVVALLDTQSYFELMNQPYPSDQEGVLQKFLSEKLVTKSKTGYSITNLGAILFAKKLSSFEGMD 645 EW+EFKHN SPEEIG +SALSN AC+ +E+GYL+FGI + +++ILGT F K K NEELE WL RL+P+IDFQI E++ K ++ FV+PAA QPVEFL+ Y+RVGS T+KL++F +K KIWR K +EL++A + LS S+V+ LL T++YF+L+ PYPSDQ+GV++K + + ++ K + Y+ITNLGA+LFAK+L FE ++ Sbjct: 21 EWIEFKHNFHSPEEIGERISALSNSACILNKEFGYLVFGIENNTHKILGTTFKAKSHKAKGNEELEMWLATRLNPRIDFQIYEFDYDNKHISFFVIPAAKTQPVEFLHQAYIRVGSFTKKLNEFADKQAKIWRNTG-KPYELEIAQDGLSISDVIKLLSTETYFDLLKIPYPSDQKGVIEKLMDDNIIVKIHSKYAITNLGALLFAKELKDFESVE 235
BLAST of mRNA_M-pyrifera_M_contig103981.845.1 vs. uniprot
Match: UPI001FE7910C (putative DNA binding domain-containing protein n=1 Tax=Massilibacteroides vaginae TaxID=1673718 RepID=UPI001FE7910C) HSP 1 Score: 240 bits (612), Expect = 7.500e-74 Identity = 121/215 (56.28%), Postives = 158/215 (73.49%), Query Frame = 1 Query: 1 EWVEFKHNHLSPEEIGRYLSALSNGACLQRQEYGYLLFGINDASYEILGTDFSPSKQKVKNEELENWLVNRLSPKIDFQIEEYNVGEKK-LALFVVPAAHNQPVEFLNMPYVRVGSATRKLSDFPEKAKKIWRGKKEKSFELQVAMEHLSTSEVVALLDTQSYFELMNQPYPSDQEGVLQKFLSEKLVTKSKTGYSITNLGAILFAKKLSSFEGM 642 EW+EFK N S EEIG+ +SALSNGAC+ Q +GYL+FGI D S+ I GT FS + K NEELENWL NRL+P+IDF I E+ EK+ + +FV+PAA QPVEFL++ Y+RVGS TRKLS+FPEK KIW+ K+ FE ++A + L +++ L T++YF+LM PYPS Q+GV+ KFL EKL+ KSK GY+IT LGA+LFAK L F+ + Sbjct: 22 EWIEFKLNFHSEEEIGQRISALSNGACIHNQRFGYLVFGIEDESHIIKGTTFSARRHKKGNEELENWLANRLNPRIDFSIYEFEYDEKRHITMFVIPAAKTQPVEFLHISYIRVGSITRKLSEFPEKQAKIWK-KETTPFEKEIAKDDLVAADISKYLSTETYFDLMRIPYPSTQQGVIDKFLEEKLIVKSK-GYAITKLGALLFAKDLKEFDSI 234 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103981.845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103981.845.1 >prot_M-pyrifera_M_contig103981.845.1 ID=prot_M-pyrifera_M_contig103981.845.1|Name=mRNA_M-pyrifera_M_contig103981.845.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=215bp EWVEFKHNHLSPEEIGRYLSALSNGACLQRQEYGYLLFGINDASYEILGTback to top mRNA from alignment at M-pyrifera_M_contig103981:2..646+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103981.845.1 ID=mRNA_M-pyrifera_M_contig103981.845.1|Name=mRNA_M-pyrifera_M_contig103981.845.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=645bp|location=Sequence derived from alignment at M-pyrifera_M_contig103981:2..646+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103981:2..646+ >mRNA_M-pyrifera_M_contig103981.845.1 ID=mRNA_M-pyrifera_M_contig103981.845.1|Name=mRNA_M-pyrifera_M_contig103981.845.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1290bp|location=Sequence derived from alignment at M-pyrifera_M_contig103981:2..646+ (Macrocystis pyrifera P11B4 male)back to top |