mRNA_M-pyrifera_M_contig103875.826.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103875.826.1 vs. uniprot
Match: A0A6N7FP60_9ACTN (Flagellar hook-associated protein 3 n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FP60_9ACTN) HSP 1 Score: 128 bits (321), Expect = 2.190e-33 Identity = 65/150 (43.33%), Postives = 96/150 (64.00%), Query Frame = 1 Query: 1 GAYLGDTGAVTRTAGNGATYEVNVPGPEIFGVENPGDPLNGNMFEALREIADRIEAGESAAVG--LDAIERTRSTLHGAQATVGIRLASLEGLESRNADAIIEMRSALSETEDVDLADAILDLKAQEAAYTAALSVTGRILDRSLLDFLR 444 G Y GD +TR G G+ +VNV G +FGV +PGDP NG++F+ L + + AG+ AA G L+ I+ + +QAT+G R LE SRN+ I++++ LSE ED+D A AI+++K +E AY AALSVT +++ +L+DFLR Sbjct: 151 GEYQGDGAPITRAIGPGSEVQVNVSGETVFGVRDPGDPANGDLFQVLEQAVADLRAGDVAAAGQGLERIDAAMDRIGVSQATLGTRARQLEAQASRNSSTTIDLKAGLSEVEDIDYAQAIIEVKTEEMAYQAALSVTAKVIQPTLIDFLR 300
BLAST of mRNA_M-pyrifera_M_contig103875.826.1 vs. uniprot
Match: A0A5Q2RG02_9ACTN (Flagellar hook-associated protein 3 n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RG02_9ACTN) HSP 1 Score: 115 bits (288), Expect = 1.560e-28 Identity = 63/150 (42.00%), Postives = 97/150 (64.67%), Query Frame = 1 Query: 1 GAYLGDTGAVTRTAGNGATYEVNVPGPEIFGVENPGDPLNGNMFEALREIADRIEAGES--AAVGLDAIERTRSTLHGAQATVGIRLASLEGLESRNADAIIEMRSALSETEDVDLADAILDLKAQEAAYTAALSVTGRILDRSLLDFLR 444 G YLG+ G V R + VN GPE+FG DP +GN+F+ L +IA ++AG++ A+ GL+AI R + AQ +G R +E + RNA+ +E++++LSE EDVD+A+ +++++ QE AY AALSVT +++ +LLDFLR Sbjct: 150 GTYLGNEGQVQRNVAPDVSIRVNRTGPEVFGTA--ADP-DGNVFQVLEQIAAALDAGDTGAASAGLEAIGRAADRIERAQVEMGARSKQVEEIGFRNAEVDVELKASLSEVEDVDIAETLIEVRIQEMAYNAALSVTAKVIQPTLLDFLR 296
BLAST of mRNA_M-pyrifera_M_contig103875.826.1 vs. uniprot
Match: A0A7X6SL82_9ACTN (Flagellin n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6SL82_9ACTN) HSP 1 Score: 109 bits (273), Expect = 2.700e-26 Identity = 63/150 (42.00%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 1 GAYLGDTGAVTRTAGNGATYEVNVPGPEIFGVENPGDPLNGNMFEALREIADRIEAGESAAV--GLDAIERTRSTLHGAQATVGIRLASLEGLESRNADAIIEMRSALSETEDVDLADAILDLKAQEAAYTAALSVTGRILDRSLLDFLR 444 G +LG+ +VT + + VN GPE+FG NP DP+NG++F+ + IA IEA + AAV GL I+ + GAQ +G R LE + S AD + + +A+S+ EDVD A+AI++ + + +AY A+L+V +IL SLLDFLR Sbjct: 150 GNFLGNANSVTIPVLDAVQFRVNRTGPEVFGTPNPSDPINGDVFQLIDSIAASIEAVDPAAVANGLTQIDAALERISGAQVEMGTRHRQLEDVMSTIADQEVAVTTAISKKEDVDAAEAIMNYQTRLSAYEASLAVGSKILQPSLLDFLR 299
BLAST of mRNA_M-pyrifera_M_contig103875.826.1 vs. uniprot
Match: UPI001CC543D3 (flagellar hook-associated protein FlgL n=1 Tax=Nocardioides sp. TRM66260-LWL TaxID=2874478 RepID=UPI001CC543D3) HSP 1 Score: 108 bits (269), Expect = 1.010e-25 Identity = 59/150 (39.33%), Postives = 90/150 (60.00%), Query Frame = 1 Query: 1 GAYLGDTGAVTRTAGNGATYEVNVPGPEIFGVENPGDPLNGNMFEALREIADRIEAGESAAV--GLDAIERTRSTLHGAQATVGIRLASLEGLESRNADAIIEMRSALSETEDVDLADAILDLKAQEAAYTAALSVTGRILDRSLLDFLR 444 GAY+GD+G VTRT +G V+VPG ++ G P ++F+ L ++ + AG+ A + GL + +S + AQATVG +EG + DA++ +R+ LSE ED DL ++DL+ Q+ AY AALS T +++ SL+DFLR Sbjct: 154 GAYIGDSGQVTRTIADGVQVRVDVPGLDVIG------PNGASIFDDLANLSTALRAGDQAGMQTGLAKLSARQSAITTAQATVGAAYNRVEGASQKGKDALVALRTNLSEVEDADLPKTLVDLQMQQVAYQAALSATAKVMQPSLIDFLR 297
BLAST of mRNA_M-pyrifera_M_contig103875.826.1 vs. uniprot
Match: UPI001D0F4A99 (hypothetical protein n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D0F4A99) HSP 1 Score: 107 bits (267), Expect = 2.020e-25 Identity = 60/150 (40.00%), Postives = 88/150 (58.67%), Query Frame = 1 Query: 1 GAYLGDTGAVTRTAGNGATYEVNVPGPEIFGVENPGDPLNGNMFEALREIADRIEAGESAAV--GLDAIERTRSTLHGAQATVGIRLASLEGLESRNADAIIEMRSALSETEDVDLADAILDLKAQEAAYTAALSVTGRILDRSLLDFLR 444 G Y GD G V R +VN G +FG + P++GN+F+ L +A +EAG+ AA+ G+ ++ + AQ +G R ++ + +R+ A ++ R ALSE EDVD+A+AILDLKA+E Y ALS T ++ SLLDFLR Sbjct: 150 GTYQGDGGVVRRPIAPAVDVQVNRSGTSVFGTQT-ATPMDGNVFQVLEALATAVEAGDDAAMATGITRVDTAIDRVESAQVELGARARQVDDVVARSETADLDRRQALSELEDVDIAEAILDLKAREVGYQVALSATAQVSKLSLLDFLR 298
BLAST of mRNA_M-pyrifera_M_contig103875.826.1 vs. uniprot
Match: A0A0Q6UPY1_9ACTN (Uncharacterized protein n=1 Tax=Nocardioides sp. Root122 TaxID=1736431 RepID=A0A0Q6UPY1_9ACTN) HSP 1 Score: 99.8 bits (247), Expect = 1.720e-22 Identity = 62/148 (41.89%), Postives = 87/148 (58.78%), Query Frame = 1 Query: 7 YLGDTGAVTRTAGNGATYEVNVPGPEIFGVENPGDPLNGNMFEALREIADRIEAGESAAV--GLDAIERTRSTLHGAQATVGIRLASLEGLESRNADAIIEMRSALSETEDVDLADAILDLKAQEAAYTAALSVTGRILDRSLLDFLR 444 Y GDT V R +G +V V GP FG N GD N+F+ L +AD + AG+++A+ GL+A++ + L A+ VG R +E R D + + +ALSE E+ DL A++DLK QE AY A+L+ T R+L SLLDFLR Sbjct: 157 YAGDTNPVNRAVADGVAVDVAVSGPAAFG--NDGD----NVFDHLSALADAVRAGDTSAIASGLEALKDDGNRLIVARTDVGARTNRVEQAGIRAGDTELSLTNALSEIENTDLPRAMVDLKMQEVAYQASLAATARVLQPSLLDFLR 298
BLAST of mRNA_M-pyrifera_M_contig103875.826.1 vs. uniprot
Match: A0A328LUP7_9BACI (Flagellin n=2 Tax=Terrabacteria group TaxID=1783272 RepID=A0A328LUP7_9BACI) HSP 1 Score: 99.8 bits (247), Expect = 1.860e-22 Identity = 55/146 (37.67%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 7 YLGDTGAVTRTAGNGATYEVNVPGPEIFGVENPGDPLNGNMFEALREIADRIEAGESAAVGLDAIERTRSTLHGAQATVGIRLASLEGLESRNADAIIEMRSALSETEDVDLADAILDLKAQEAAYTAALSVTGRILDRSLLDFLR 444 Y GD V R T V+ GP IFG +N D ++F L+ IAD + +G + +DA+++ +T+ ++ VG R A L + NA+A++++ + S ED+DL+ A LD+K+QE +Y AALSVT ++L +L+DFLR Sbjct: 159 YTGDGSTVERRISPNTTIRVDANGPAIFGRDNT-DGKGDSVFGLLKTIADTLRSGGDVSAHIDAMDKALNTVINGRSEVGARHAQLLRAQDANANAVVDLENQRSGIEDLDLSKAFLDVKSQELSYQAALSVTAKVLQPTLMDFLR 303
BLAST of mRNA_M-pyrifera_M_contig103875.826.1 vs. uniprot
Match: UPI0015F8C971 (flagellar hook protein n=1 Tax=Nocardioides dongkuii TaxID=2760089 RepID=UPI0015F8C971) HSP 1 Score: 99.0 bits (245), Expect = 3.200e-22 Identity = 60/150 (40.00%), Postives = 86/150 (57.33%), Query Frame = 1 Query: 1 GAYLGDTGAVTRTAGNGATYEVNVPGPEIFGVENPGDPLNGNMFEALREIADRIEAGESAAVG--LDAIERTRSTLHGAQATVGIRLASLEGLESRNADAIIEMRSALSETEDVDLADAILDLKAQEAAYTAALSVTGRILDRSLLDFLR 444 GAY+G G V RT +G V+V G ++ G P ++F+ L ++D + AG+ A +G LDA+ L +A VG + +E + A+A + + ALSE E+ DL AI+DLK QE AY AAL+ TGR+L SL+DFLR Sbjct: 152 GAYVGTPGPVMRTVADGIRVRVDVDGTDLVG------PNGASLFDDLDALSDALRAGDDAGIGAGLDALGGRLEKLAAVRAQVGATQSRIEAASLKAANAELTLTQALSEVENTDLPRAIVDLKMQEVAYEAALAATGRVLQPSLVDFLR 295
BLAST of mRNA_M-pyrifera_M_contig103875.826.1 vs. uniprot
Match: A0A6J4H1P5_9ACTN (Flagellar hook-associated protein FlgL n=1 Tax=uncultured Blastococcus sp. TaxID=217144 RepID=A0A6J4H1P5_9ACTN) HSP 1 Score: 99.0 bits (245), Expect = 3.650e-22 Identity = 58/155 (37.42%), Postives = 87/155 (56.13%), Query Frame = 1 Query: 1 GAYLGDTGAVTRTAGNGATYEVNVPGPEIFGVENPGDPLNGNMFEALREIADRI--EAGESAAV-----GLDAIERTRSTLHGAQATVGIRLASLEGLESRNADAIIEMRSALSETEDVDLADAILDLKAQEAAYTAALSVTGRILDRSLLDFLR 444 G ++GDTG RT G EVNV GP F GD N +FE LR ++ ++ +AG V GL ++R + GA TVG R+ +E ++++ + + + ++LSE E +DL I++L+ QE AY +AL T R++ SLLDFLR Sbjct: 154 GGFVGDTGTAVRTVAAGTQVEVNVTGPAAF-----GDGTNAQVFEVLRGLSAQLRGQAGTPGGVTDLGDGLSKLDRATERIIGALGTVGARVNRVESMKAKAEEQRVTVTNSLSEVESIDLPKTIMELQMQEVAYKSALGATARVVQPSLLDFLR 303
BLAST of mRNA_M-pyrifera_M_contig103875.826.1 vs. uniprot
Match: A0A1H1S4A1_9ACTN (Flagellin n=1 Tax=Marmoricola scoriae TaxID=642780 RepID=A0A1H1S4A1_9ACTN) HSP 1 Score: 98.6 bits (244), Expect = 4.550e-22 Identity = 59/150 (39.33%), Postives = 85/150 (56.67%), Query Frame = 1 Query: 1 GAYLGDTGAVTRTAGNGATYEVNVPGPEIFGVENPGDPLNGNMFEALREIADRIEAGESAAV--GLDAIERTRSTLHGAQATVGIRLASLEGLESRNADAIIEMRSALSETEDVDLADAILDLKAQEAAYTAALSVTGRILDRSLLDFLR 444 G+Y+GD GAV RT G V+V G +FG +F+ L ++ + AG+ A V G+ A+ R + ++A +G R A +E S A +++RS+LS ED DL + I+DLK QEAAY AAL T R+L SL+D+LR Sbjct: 153 GSYVGDGGAVLRTVGPQEQVRVDVDGASVFGA------AGNTVFDHLTALSTALRAGDEAGVRTGIGALNRDLEQVTTSRAEMGTRQARVEAAVSATAARELDLRSSLSSVEDADLPETIIDLKLQEAAYQAALGATARVLQPSLMDYLR 296 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103875.826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103875.826.1 >prot_M-pyrifera_M_contig103875.826.1 ID=prot_M-pyrifera_M_contig103875.826.1|Name=mRNA_M-pyrifera_M_contig103875.826.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp GAYLGDTGAVTRTAGNGATYEVNVPGPEIFGVENPGDPLNGNMFEALREIback to top mRNA from alignment at M-pyrifera_M_contig103875:5..451+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103875.826.1 ID=mRNA_M-pyrifera_M_contig103875.826.1|Name=mRNA_M-pyrifera_M_contig103875.826.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=447bp|location=Sequence derived from alignment at M-pyrifera_M_contig103875:5..451+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103875:5..451+ >mRNA_M-pyrifera_M_contig103875.826.1 ID=mRNA_M-pyrifera_M_contig103875.826.1|Name=mRNA_M-pyrifera_M_contig103875.826.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig103875:5..451+ (Macrocystis pyrifera P11B4 male)back to top |