mRNA_M-pyrifera_M_contig103823.815.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103823.815.1 vs. uniprot
Match: A0A351EPN3_9ACTN (MFS domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351EPN3_9ACTN) HSP 1 Score: 272 bits (695), Expect = 3.500e-87 Identity = 143/220 (65.00%), Postives = 174/220 (79.09%), Query Frame = 1 Query: 1 LPWVTFAPVGGVMVDRWDRRRIIVTTQVTRGLVMAALAALILADAVAIWQLCIVAFVITAGEILVDPAITALVPTVVDDDHLDTANGRIAGAEIITNDFAGGPLGAAAFAFAPWLPFVLDAGSYLGSSLPFSHLPTQAP---QLTANTNSVQADARAGFDFLRAHPLLGPFTLSQVVYYFGVASGLSLLVVLTQ-EVGASEFTFGIILAAGALGAFLGSL 648 LPW+ FAPVGGV VDRWDRR+ I+ TQ RGLVMA L L+LA+ VAIW LC+VAFVITAGEILVDP++TALVP VVDD LDTANGRIA AE+ITNDFAG P+GA AF PWLPF++DA SYLGS +PF +P AP ++ T +++A+A+ GFD+LR HP+LGP T++QVVYYFG+++G S LV LT + GAS FTFG +LA ALGAF+GSL Sbjct: 56 LPWLVFAPVGGVFVDRWDRRQTILVTQAARGLVMAVLFVLVLAEQVAIWHLCLVAFVITAGEILVDPSVTALVPEVVDDADLDTANGRIASAELITNDFAGAPVGATAFGINPWLPFLIDAASYLGSIVPFRGVPKPAPAPAEMPLVTGAIRAEAKEGFDWLRKHPILGPLTVAQVVYYFGLSAGFSQLVTLTTLDNGASSFTFGALLAVAALGAFVGSL 275
BLAST of mRNA_M-pyrifera_M_contig103823.815.1 vs. uniprot
Match: UPI001C62AF81 (MFS transporter n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C62AF81) HSP 1 Score: 251 bits (640), Expect = 8.590e-79 Identity = 140/223 (62.78%), Postives = 167/223 (74.89%), Query Frame = 1 Query: 1 LPWVTFAPVGGVMVDRWDRRRIIVTTQVTRGLVMAALAALILADAVAIWQLCIVAFVITAGEILVDPAITALVPTVVDDDHLDTANGRIAGAEIITNDFAGGPLGAAAFAFAPWLPFVLDAGSYLGSSLPFSHLPTQAPQLTA------NTNSVQADARAGFDFLRAHPLLGPFTLSQVVYYFGVASGLSLLVVL-TQEVGASEFTFGIILAAGALGAFLGSL 648 LPW TFAP+GGV+VDR DRR+ I+ TQ R LVM ALAA + D VAIWQLC+VAFV+T GEI+VDPAI ALVPTVV+D+ LD ANGRIA AEI+TNDFAGGP+GA AF APWLPFV+D SYLGS LPF LPT+ P+ + + + +A GF +LR H +LGP T +QVV Y G ++GLSLLVVL T E+ AS TFG +LAAGALGA +GSL Sbjct: 67 LPWATFAPLGGVIVDRRDRRQTILVTQTWRALVMVALAASVGLDLVAIWQLCVVAFVVTVGEIMVDPAIVALVPTVVEDEDLDRANGRIASAEIVTNDFAGGPIGAVAFGLAPWLPFVIDGASYLGSVLPFRRLPTERPRPSRPDPRPDGRRTRRDEALEGFTWLRRHLVLGPLTAAQVVSYLGASAGLSLLVVLVTIELDASALTFGAVLAAGALGAVVGSL 289
BLAST of mRNA_M-pyrifera_M_contig103823.815.1 vs. uniprot
Match: A0A7Y1ZUC3_9ACTN (MFS transporter n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZUC3_9ACTN) HSP 1 Score: 217 bits (552), Expect = 1.230e-65 Identity = 119/217 (54.84%), Postives = 152/217 (70.05%), Query Frame = 1 Query: 1 LPWVTFAPVGGVMVDRWDRRRIIVTTQVTRGLVMAALAALILADAVAIWQLCIVAFVITAGEILVDPAITALVPTVVDDDHLDTANGRIAGAEIITNDFAGGPLGAAAFAFAPWLPFVLDAGSYLGSSLPFSHLPTQAPQLTANTNSVQADARAGFDFLRAHPLLGPFTLSQVVYYFG-VASGLSLLVVLTQEVGASEFTFGIILAAGALGAFLGSL 648 LPW+ F P+GG +VDRW RR+II+ Q+ R +M AL ++ADA AIWQL +VAF IT GEILVDPA ALVPT+V+ D LD ANGRI EI+TN+F G PLG A FA A WLPF DA SY S++ F+ LP ++ L +S++AD GF +LR HP+LGP T+ V+ FG VA+G L+++ TQ +G +E TFG+ILA GA GA LGSL Sbjct: 59 LPWLVFGPIGGALVDRWRRRQIIIVVQLVRAGIMLALMVAVVADAAAIWQLYVVAFAITFGEILVDPATIALVPTLVERDELDQANGRIVSTEIVTNEFVGSPLGGAGFALAQWLPFGFDAASYASSTVAFARLP-KSVALPRPASSMRADIGEGFRWLRHHPVLGPMTVVIAVFNFGAVAAGAMLVLLTTQVLGGAEATFGVILAVGAFGALLGSL 274
BLAST of mRNA_M-pyrifera_M_contig103823.815.1 vs. uniprot
Match: A0A838PU48_9ACTN (MFS transporter n=1 Tax=Euzebyaceae bacterium TaxID=2740542 RepID=A0A838PU48_9ACTN) HSP 1 Score: 140 bits (353), Expect = 5.160e-36 Identity = 88/220 (40.00%), Postives = 129/220 (58.64%), Query Frame = 1 Query: 1 LPWVTFAPVGGVMVDRWDRRRIIVTTQVTRGLVMAALAALILADAVAIWQLCIVAFVITAGEILVDPAITALVPTVVDDDHLDTANGRIAGAEIITNDFAGGPLGAAAFAFAPWLPFVLDAGSYLGSSLPFSHLPTQAPQLTAN---TNSVQADARAGFDFLRAHPLLGPFTLSQVVYYFGVASGLSLLVVL-TQEVGASEFTFGIILAAGALGAFLGSL 648 LPW+ F PVGG + DR DRRR+I+ QV R + A + A ++ L VA I GE++VD A+ A++P V D LD ANGR+ AE++ N+F GGP+G+ FA A LPF +DA ++ +++ F+ + APQ+ + S+ AD R G +L H LL F ++ V G A+G S+LV+L T AS FG++L+ A G F+G+L Sbjct: 65 LPWLLFGPVGGAIADRSDRRRMIIAVQVARAACVGVFAVSLAAGGASLLALYAVALCIGLGEVVVDGALQAVIPLVTPRDRLDAANGRMGAAELLANEFLGGPVGSLLFALAAALPFAIDALTFSLAAVAFTRV--SAPQVRGRPTTSTSLFADVREGVRWLSRHRLLRTFAVAMAVTNLGYAAGSSMLVLLVTDTFEASGIAFGLLLSGAAAGGFVGTL 282
BLAST of mRNA_M-pyrifera_M_contig103823.815.1 vs. uniprot
Match: A0A3E0P1I8_9ACTN (MFS transporter n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3E0P1I8_9ACTN) HSP 1 Score: 136 bits (343), Expect = 1.360e-33 Identity = 83/217 (38.25%), Postives = 130/217 (59.91%), Query Frame = 1 Query: 4 PWVTFAPVGGVMVDRWDRRRIIVTTQVTRGLVMAALAALILADAVAIWQLCIVAFVITAGEILVDPAITALVPTVVDDDHLDTANGRIAGAEIITNDFAGGPLGAAAFAFAPWLPFVLDAGSYLGSSLPFSHLPTQAPQ-LTANTNSVQADARAGFDFLRAHPLLGPFTLSQVVYYFGVASGLSLLVVLTQEV-GASEFTFGIILAAGALGAFLGSL 648 PW+ + G +VDR +RR +++ Q RG+V+ ALA IL +I + + AFVI GE+ VD + A +P +V++ L+ AN ++ E +TND GGP+GA FA+AP +PF+LD+ ++L + L S + + +TA S+ R G F+R H LLG L+ + V +G S+LV+L EV G SE FG+++A GA+G F+G++ Sbjct: 58 PWILVSLPAGAIVDRLNRRHLMMIGQAVRGVVVGALALAILGGVESIPLIYVTAFVIGLGEVFVDSSSQAAIPMLVEEPELENANSKLLAVEFVTNDALGGPVGAWLFAYAPAIPFLLDSSTFLVAGLLISQITAPMQESVTAERPSMLDSIREGVSFVRNHELLGGIALAVALANLAVGAGGSILVLLALEVLGVSEVGFGLLVATGAIGGFIGAI 274
BLAST of mRNA_M-pyrifera_M_contig103823.815.1 vs. uniprot
Match: A0A848S2U4_9MICO (MFS transporter n=1 Tax=Planctomonas sp. JC2975 TaxID=2729626 RepID=A0A848S2U4_9MICO) HSP 1 Score: 127 bits (318), Expect = 5.850e-31 Identity = 91/223 (40.81%), Postives = 129/223 (57.85%), Query Frame = 1 Query: 1 LPWVTFAPVGGVMVDRWDRRRIIVTTQVTRGLVMAALAALILADAVAIWQLCIVAFVITAGEILVDPAITALVPTVVDDDHLDTANGRIAGAEIITNDFAGGPLGAAAFAFAPWLPFVLDAGSYLGSSLPFSHL---PT---QAPQLTANTNSVQADARAGFDFLRAHPLLGPFTLSQVVYYFGVASGLSLLVVLTQEV-GASEFTFGIILAAGALGAFLGSL 648 LPW+T A GGV+VDR DRRR+++ TQV + LV+A +AA+ IW L ++AFV+ ++L A A VPT+V++D LD ANGR+ AE + DF G P+G+A FA + +PF++DA S+ GS L + PT +A A+ +SV D R G +L L TL F A LSLLV+ ++V +G++LAA A GA +G L Sbjct: 60 LPWLTVALFGGVIVDRADRRRLMLFTQVGQMLVVAVIAAVAGLHVTQIWMLYVLAFVMGCADVLFMSASQAFVPTIVEEDDLDAANGRLVAAESASRDFLGPPIGSALFAVSSAVPFLVDAISFGGSVLLLLRIKPSPTSEHRASSAAASRSSVWTDIREGLRWLMRSRLPRLLTLISAAGNFCEAMALSLLVLFARDVLNIGPAGYGVLLAAMAAGAVIGGL 282
BLAST of mRNA_M-pyrifera_M_contig103823.815.1 vs. uniprot
Match: A0A1H9TM17_9PSEU (Na+/melibiose symporter n=1 Tax=Actinokineospora terrae TaxID=155974 RepID=A0A1H9TM17_9PSEU) HSP 1 Score: 123 bits (308), Expect = 1.170e-29 Identity = 82/217 (37.79%), Postives = 121/217 (55.76%), Query Frame = 1 Query: 1 LPWVTFAPVGGVMVDRWDRRRIIVTTQVTRGLVMAALAALILADAVAIWQLCIVAFVITAGEILVDPAITALVPTVVDDDHLDTANGRIAGAEIITNDFAGGPLGAAAFAFAPWLPFVLDAGSYL-GSSLPFSHLPTQAPQLTANTNSVQADARAGFDFLRAHPLLGPFTLSQVVYYFGVASGLSLLVVLT-QEVGASEFTFGIILAAGALGAFLGS 645 LPW+ F+ + G +VDRWDRRR++V V RG+V+A LA + AV +W + + F++ GE LVD A TALVP VV + L AN R G I+TN F PLGAA F A LPF L+A +L G+ + + P+ + ++ + G + +H LL +S + + + +S+LV+ Q +G SE FG++ AA A G +GS Sbjct: 57 LPWLLFSLISGALVDRWDRRRVVVAVNVYRGVVIAGLAVAVATGAVTVWLVYLAFFLVGVGETLVDNAATALVPDVVAVEALPRANARQQGVAIVTNLFVAPPLGAALFVVAAALPFSLEAALFLLGAVVAATLRHRPPPRRVEHRRRMRDEIVEGVRWAWSHRLLRSMAVSLCLMNIALMATVSILVLYAEQRLGLSEVGFGLLFAAVAAGGLIGS 273
BLAST of mRNA_M-pyrifera_M_contig103823.815.1 vs. uniprot
Match: A0A1A8Z6B1_9ACTN (Predicted arabinose efflux permease, MFS family n=1 Tax=Micromonospora auratinigra TaxID=261654 RepID=A0A1A8Z6B1_9ACTN) HSP 1 Score: 119 bits (297), Expect = 4.450e-28 Identity = 85/222 (38.29%), Postives = 117/222 (52.70%), Query Frame = 1 Query: 1 LPWVTFAPVGGVMVDRWDRRRIIVTTQVTRGLVMAALAALILADAVAIWQLCIVAFVITAGEILVDPAITALVPTVVDDDHLDTANGRIAGAEIITNDFAGGPLGAAAFAFAPWLPFVLDAGSYLGSSLPFSHL------PTQAPQLTANTNSVQADARAGFDFLRAHPLLGPFTLSQVVYYFGVASGLSLLVVLT-QEVGASEFTFGIILAAGALGAFLGS 645 LPW+ FA V G +VDR DRRR+IV + RGLV+AALA +L + +C+ F+ GE L D A AL+P+VV + L+ AN R+ +I N FA PLGA F A LPF DA ++ ++L + L P AP T S++AD G L A P+L S V + ++ V+ Q +G SE +G++L A ALG GS Sbjct: 58 LPWLLFALVSGALVDRLDRRRLIVAVNLGRGLVLAALAVAVLTGVATVPLICLAFFLTGVGETLADTASGALLPSVVPAERLEQANSRLFATFVIGNQFAAKPLGAYLFVLAAALPFGFDAATFGLAALLLALLRWRPVPPPAAPAGTGGRRSLRADVAVGVRALWAVPVLRTLAGSIAVMNVAFCAAFAVFVLYARQRLGLSEVGYGLLLTASALGGLAGS 279
BLAST of mRNA_M-pyrifera_M_contig103823.815.1 vs. uniprot
Match: A0A1C4YTN1_9ACTN (Predicted arabinose efflux permease, MFS family n=2 Tax=Micromonospora mirobrigensis TaxID=262898 RepID=A0A1C4YTN1_9ACTN) HSP 1 Score: 117 bits (292), Expect = 2.630e-27 Identity = 85/223 (38.12%), Postives = 119/223 (53.36%), Query Frame = 1 Query: 1 LPWVTFAPVGGVMVDRWDRRRIIVTTQVTRGLVMAALAALILADAVAIWQLCIVAFVITAGEILVDPAITALVPTVVDDDHLDTANGRIAGAEIITNDFAGGPLGAAAFAFAPWLPFVLDAGSY-----LGSSLPFSHLP--TQAPQLTANTNSVQADARAGFDFLRAHPLLGPFTLSQVVYYFGVASGLSLLVVLT-QEVGASEFTFGIILAAGALGAFLGS 645 LPW+ FA V G +VDR+DRRR+IV + RGLV+AALAA +L + +C+ F+ GE L D A AL+P+VV + L+ AN R+ +I N FA PLGA F A LPF +DA S+ L + L + +P T A T S++AD G L A P+L +S V + + V+ Q +G + +G++L A ALG GS Sbjct: 67 LPWLLFALVSGALVDRFDRRRLIVAVNLGRGLVLAALAAAVLLGVATVPLICLAFFLTGVGETLADTASGALLPSVVPPERLEQANSRLFATFVIGNQFAAKPLGAYLFVLAAALPFSVDAASFGLAALLLALLRWRPVPAATTASGATDRRRSLRADIADGVRALWAVPVLRTLAVSIAVMNVAFCAAFAAFVLYAGQRLGLGDVGYGVLLTASALGGLAGS 289
BLAST of mRNA_M-pyrifera_M_contig103823.815.1 vs. uniprot
Match: A0A7W7WVY3_9PSEU (MFS family permease n=1 Tax=Saccharothrix violaceirubra TaxID=413306 RepID=A0A7W7WVY3_9PSEU) HSP 1 Score: 116 bits (291), Expect = 3.010e-27 Identity = 79/219 (36.07%), Postives = 123/219 (56.16%), Query Frame = 1 Query: 1 LPWVTFAPVGGVMVDRWDRRRIIVTTQVTRGLVMAALAALILADAVAIWQLCIVAFVITAGEILVDPAITALVPTVVDDDHLDTANGRIAGAEIITNDFAGGPLGAAAFAFAPWLPFVLDAGSYLGSSLPFSHL---PTQAPQLTANTNSVQADARAGFDFLRAHPLLGPFTLSQVVYYFGVASGLSLLVVLTQE-VGASEFTFGIILAAGALGAFLGS 645 LPW+ F+ V GV+VDR DRRR++V + RG V+ ALA +L D V++ + + F++ GE L D A ALVP VV DD L AN R+A ++ N PLGAA F A LPF +DA +++ +++ + + P AP+ A +V+ D G +L H +L L + + G +++V+ T+E +G +G++LAA A+G G+ Sbjct: 54 LPWLLFSLVSGVIVDRVDRRRLVVVVDLARGAVIGALALAVLTDHVSVPLIYVCLFLLGTGETLSDNAARALVPAVVADDALPRANSRLAAVNLVVNQLGAPPLGAALFVLAAALPFGIDAVTFVVAAMIVAGVRGVPKPAPKARA---TVRRDIATGLRWLWRHDVLRTLCLCLALMNLTLTGGFAIMVLYTRERLGLDPSAYGLMLAASAVGGLPGT 269 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103823.815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103823.815.1 >prot_M-pyrifera_M_contig103823.815.1 ID=prot_M-pyrifera_M_contig103823.815.1|Name=mRNA_M-pyrifera_M_contig103823.815.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp LPWVTFAPVGGVMVDRWDRRRIIVTTQVTRGLVMAALAALILADAVAIWQback to top mRNA from alignment at M-pyrifera_M_contig103823:1..648- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103823.815.1 ID=mRNA_M-pyrifera_M_contig103823.815.1|Name=mRNA_M-pyrifera_M_contig103823.815.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig103823:1..648- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103823:1..648- >mRNA_M-pyrifera_M_contig103823.815.1 ID=mRNA_M-pyrifera_M_contig103823.815.1|Name=mRNA_M-pyrifera_M_contig103823.815.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig103823:1..648- (Macrocystis pyrifera P11B4 male)back to top |