mRNA_M-pyrifera_M_contig103771.809.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103771.809.1
Unique NamemRNA_M-pyrifera_M_contig103771.809.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig103771.809.1 vs. uniprot
Match: A0A2E7KJ71_9PLAN (Uncharacterized protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KJ71_9PLAN)

HSP 1 Score: 419 bits (1078), Expect = 3.530e-132
Identity = 214/216 (99.07%), Postives = 214/216 (99.07%), Query Frame = 1
Query:    1 DVHEATITLDLSKTFEDKFLFRFPAAVKLISTSVNDRRITPIEAEGQFLVPLFDQLDTYRITIHYQTQAPENRLTASRQIPFPQINQRVLETDWNFIVPKGIRLLSGPANMVLQEPLPAESLTRRFLGVLGRESTANPTEGTEWNALVLFPVSFGTLETTNITESGILSWMMLLLTLFCGLLLRIFRVGLRDKICIVVALSALLLSWNLSYPLAQI 648
            DVHEATITLDLSKTFEDKFLFRFPAAVKLISTSVNDRRITPIEAEGQFLVPLFDQLDTYRITIHYQTQAPENRLTA RQIPFPQINQRVLETDWNFIVPKGIRLLSGPANMVLQEPLPAESLTRRFLGVLGRESTANPTEGTEWNALVLFPVSFG LETTNITESGILSWMMLLLTLFCGLLLRIFRVGLRDKICIVVALSALLLSWNLSYPLAQI
Sbjct:  798 DVHEATITLDLSKTFEDKFLFRFPAAVKLISTSVNDRRITPIEAEGQFLVPLFDQLDTYRITIHYQTQAPENRLTAPRQIPFPQINQRVLETDWNFIVPKGIRLLSGPANMVLQEPLPAESLTRRFLGVLGRESTANPTEGTEWNALVLFPVSFGALETTNITESGILSWMMLLLTLFCGLLLRIFRVGLRDKICIVVALSALLLSWNLSYPLAQI 1013          
BLAST of mRNA_M-pyrifera_M_contig103771.809.1 vs. uniprot
Match: A0A518A236_9PLAN (Uncharacterized protein n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A236_9PLAN)

HSP 1 Score: 373 bits (957), Expect = 7.680e-116
Identity = 190/216 (87.96%), Postives = 202/216 (93.52%), Query Frame = 1
Query:    1 DVHEATITLDLSKTFEDKFLFRFPAAVKLISTSVNDRRITPIEAEGQFLVPLFDQLDTYRITIHYQTQAPENRLTASRQIPFPQINQRVLETDWNFIVPKGIRLLSGPANMVLQEPLPAESLTRRFLGVLGRESTANPTEGTEWNALVLFPVSFGTLETTNITESGILSWMMLLLTLFCGLLLRIFRVGLRDKICIVVALSALLLSWNLSYPLAQI 648
            DVHEATITLDLSKTFEDKFLFRFPAAVKLISTSVN+RRITPIEAEGQFLVPLFDQLDTYRITIHYQT+APEN+LTA RQIPFPQINQRVLETDW+F +P+GIRLLSGPA+MVLQEPLP ESLTRRFLGVLGR ST      TEWNALVLFPV FGTLETTNI++SGILSW++LL TLFCGLLLRIF +GLRDKICIVVAL ALLLSWNLSYPLAQI
Sbjct:  810 DVHEATITLDLSKTFEDKFLFRFPAAVKLISTSVNNRRITPIEAEGQFLVPLFDQLDTYRITIHYQTKAPENQLTAVRQIPFPQINQRVLETDWDFTLPQGIRLLSGPADMVLQEPLPEESLTRRFLGVLGRVSTPKHNGETEWNALVLFPVEFGTLETTNISQSGILSWIVLLTTLFCGLLLRIFGIGLRDKICIVVALIALLLSWNLSYPLAQI 1025          
BLAST of mRNA_M-pyrifera_M_contig103771.809.1 vs. uniprot
Match: UPI00119D450C (hypothetical protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=UPI00119D450C)

HSP 1 Score: 281 bits (720), Expect = 5.400e-84
Identity = 135/216 (62.50%), Postives = 172/216 (79.63%), Query Frame = 1
Query:    1 DVHEATITLDLSKTFEDKFLFRFPAAVKLISTSVNDRRITPIEAEGQFLVPLFDQLDTYRITIHYQTQAPENRLTASRQIPFPQINQRVLETDWNFIVPKGIRLLSGPANMVLQEPLPAESLTRRFLGVLGRESTANPTEGTEWNALVLFPVSFGTLETTNITESGILSWMMLLLTLFCGLLLRIFRVGLRDKICIVVALSALLLSWNLSYPLAQI 648
            DVH+AT+ LDLSK+F+DKF+FRFPA VKLISTSV DRRITPIE E Q+LVPLFDQL++Y+ITI YQT +  N+LT +RQIPFPQ+NQ VL TDWNFI+P GIRL+SGP NM LQE LP ESL RRF GVLG++        T+W+A+V FPV + TLET+N  +  I SW++LL T+  GL LRI+R+G+R+K+C+++AL +L+ SW L + LAQI
Sbjct:  272 DVHQATVMLDLSKSFDDKFMFRFPANVKLISTSVGDRRITPIELEDQYLVPLFDQLNSYKITIQYQTLSSPNQLTVTRQIPFPQVNQLVLATDWNFILPSGIRLVSGPENMALQEALPEESLFRRFFGVLGQKQAETDNSETKWHAIVFFPVKYATLETSNTNQGKIFSWIVLLATILTGLFLRIYRIGIRNKLCVILALLSLIFSWILPFTLAQI 487          
BLAST of mRNA_M-pyrifera_M_contig103771.809.1 vs. uniprot
Match: A0A517X2P0_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X2P0_9PLAN)

HSP 1 Score: 281 bits (720), Expect = 5.610e-84
Identity = 135/216 (62.50%), Postives = 172/216 (79.63%), Query Frame = 1
Query:    1 DVHEATITLDLSKTFEDKFLFRFPAAVKLISTSVNDRRITPIEAEGQFLVPLFDQLDTYRITIHYQTQAPENRLTASRQIPFPQINQRVLETDWNFIVPKGIRLLSGPANMVLQEPLPAESLTRRFLGVLGRESTANPTEGTEWNALVLFPVSFGTLETTNITESGILSWMMLLLTLFCGLLLRIFRVGLRDKICIVVALSALLLSWNLSYPLAQI 648
            DVH+AT+ LDLSK+F+DKF+FRFPA VKLISTSV DRRITPIE E Q+LVPLFDQL++Y+ITI YQT +  N+LT +RQIPFPQ+NQ VL TDWNFI+P GIRL+SGP NM LQE LP ESL RRF GVLG++        T+W+A+V FPV + TLET+N  +  I SW++LL T+  GL LRI+R+G+R+K+C+++AL +L+ SW L + LAQI
Sbjct:  812 DVHQATVMLDLSKSFDDKFMFRFPANVKLISTSVGDRRITPIELEDQYLVPLFDQLNSYKITIQYQTLSSPNQLTVTRQIPFPQVNQLVLATDWNFILPSGIRLVSGPENMALQEALPEESLFRRFFGVLGQKQAETDNSETKWHAIVFFPVKYATLETSNTNQGKIFSWIVLLATILTGLFLRIYRIGIRNKLCVILALLSLIFSWILPFTLAQI 1027          
BLAST of mRNA_M-pyrifera_M_contig103771.809.1 vs. uniprot
Match: A0A518I813_9PLAN (Uncharacterized protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I813_9PLAN)

HSP 1 Score: 278 bits (712), Expect = 6.670e-83
Identity = 142/218 (65.14%), Postives = 176/218 (80.73%), Query Frame = 1
Query:    1 DVHEATITLDLSKTFEDKFLFRFPAAVKLISTSVNDRRITPIEAEGQFLVPLFDQLDTYRITIHYQTQAPENRLTASRQIPFPQINQRVLETDWNFIVPKGIRLLSGPANMVLQEPLPAESLTRRFLGVLGRESTANPTEGTE--WNALVLFPVSFGTLETTNITESGILSWMMLLLTLFCGLLLRIFRVGLRDKICIVVALSALLLSWNLSYPLAQI 648
            DVH+ATI LDLSKTF+DK LF FP+ VKLIST+VN +R+TPIEAE  FLVPLFDQLD+YRITI YQT +  + L+A+RQIPFPQINQRVLETDWNF +P+GIRLLSGP +MVLQ+ +   SLTRRF GVLG++    P E TE  WNA+VLFP+ +G L+T+N  ++ I+SW++LLLT+  GLLLRIF V  RDK+CI++ALS+L L+W    PLAQI
Sbjct:  816 DVHQATIDLDLSKTFDDKVLFHFPSDVKLISTAVNQQRVTPIEAENHFLVPLFDQLDSYRITIQYQTSSATDGLSATRQIPFPQINQRVLETDWNFTLPEGIRLLSGPDDMVLQQAISEGSLTRRFFGVLGKDQ--GPAESTESRWNAIVLFPLKYGILKTSNTDQAKIISWIVLLLTILVGLLLRIFSVANRDKLCIMLALSSLALAWIFPLPLAQI 1031          
BLAST of mRNA_M-pyrifera_M_contig103771.809.1 vs. uniprot
Match: A0A517W1K9_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W1K9_9PLAN)

HSP 1 Score: 278 bits (711), Expect = 9.090e-83
Identity = 134/216 (62.04%), Postives = 172/216 (79.63%), Query Frame = 1
Query:    1 DVHEATITLDLSKTFEDKFLFRFPAAVKLISTSVNDRRITPIEAEGQFLVPLFDQLDTYRITIHYQTQAPENRLTASRQIPFPQINQRVLETDWNFIVPKGIRLLSGPANMVLQEPLPAESLTRRFLGVLGRESTANPTEGTEWNALVLFPVSFGTLETTNITESGILSWMMLLLTLFCGLLLRIFRVGLRDKICIVVALSALLLSWNLSYPLAQI 648
            DVH+AT+ LDLSK+F+DKF F FPA VKLISTSV +RRITPIE   Q+LVPLFDQLD+Y+ITI YQT +  N+LT +RQIPFPQ+NQ VL T+WNFI+P GI+L+SGP NM LQE LP ESL RRF GVLG++        T+W+A V FPV +GTLET+N  ++ I+SW++LL T+  GLLLRI+R+G+R+K+CI++AL +L+ SW L + LAQI
Sbjct:  812 DVHQATVMLDLSKSFDDKFTFHFPANVKLISTSVGERRITPIELTDQYLVPLFDQLDSYKITIQYQTLSSPNQLTVTRQIPFPQVNQHVLATEWNFILPSGIKLVSGPENMALQEALPEESLIRRFFGVLGQKQGETENSETKWHAAVFFPVKYGTLETSNTRQAKIISWIVLLATILIGLLLRIYRIGIRNKLCIILALISLIFSWILPFTLAQI 1027          
BLAST of mRNA_M-pyrifera_M_contig103771.809.1 vs. uniprot
Match: A0A517RBA8_9PLAN (Uncharacterized protein n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RBA8_9PLAN)

HSP 1 Score: 273 bits (699), Expect = 3.730e-81
Identity = 135/216 (62.50%), Postives = 172/216 (79.63%), Query Frame = 1
Query:    1 DVHEATITLDLSKTFEDKFLFRFPAAVKLISTSVNDRRITPIEAEGQFLVPLFDQLDTYRITIHYQTQAPENRLTASRQIPFPQINQRVLETDWNFIVPKGIRLLSGPANMVLQEPLPAESLTRRFLGVLGRESTANPTEGTEWNALVLFPVSFGTLETTNITESGILSWMMLLLTLFCGLLLRIFRVGLRDKICIVVALSALLLSWNLSYPLAQI 648
            DVH ATI LDLSKTF+D+ LF FP+ VKLIST+VN +R+TPIE E QFLVPLFDQLD+YRITI YQT +  + L+ +RQIPFPQINQRVLETDWNF +P+GI LLSGP +MVLQ+ +P  +LTRRF GVLG++     +  + WNA+VLFPV +G LET+N  +S I+SW++LL T+  G+LLRIF VG+R+K+CI++AL +L L+W    PLAQI
Sbjct:  811 DVHRATIDLDLSKTFDDEVLFHFPSDVKLISTAVNQQRVTPIETESQFLVPLFDQLDSYRITIQYQTSSVPDGLSVTRQIPFPQINQRVLETDWNFTLPEGISLLSGPEDMVLQQAIPDGTLTRRFFGVLGKDQGPAESVESRWNAIVLFPVKYGILETSNTGQSKIISWIVLLSTIIVGMLLRIFSVGIREKLCIMLALISLALAWIFPLPLAQI 1026          
BLAST of mRNA_M-pyrifera_M_contig103771.809.1 vs. uniprot
Match: A0A2D5GZQ6_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2D5GZQ6_9PLAN)

HSP 1 Score: 266 bits (679), Expect = 1.820e-78
Identity = 133/216 (61.57%), Postives = 165/216 (76.39%), Query Frame = 1
Query:    1 DVHEATITLDLSKTFEDKFLFRFPAAVKLISTSVNDRRITPIEAEGQFLVPLFDQLDTYRITIHYQTQAPENRLTASRQIPFPQINQRVLETDWNFIVPKGIRLLSGPANMVLQEPLPAESLTRRFLGVLGRESTANPTEGTEWNALVLFPVSFGTLETTNITESGILSWMMLLLTLFCGLLLRIFRVGLRDKICIVVALSALLLSWNLSYPLAQI 648
            DVHEA I+LDLSKTF+DKFLFRFP  VKLIST+VN RRITP+EA+ Q+L+PLFDQLD Y ITI YQT +  + LT +RQIPFPQI+QRVLETDW F++P G +L+ GP NMVLQ+PLP ESLTRRFLGVLG+ +       TEW+A+VLFPV  G LE  N+    + SW++LLLT+  GLLLR+  +  RDKICI+  L +++LSW   +  AQI
Sbjct:  808 DVHEAAISLDLSKTFDDKFLFRFPHEVKLISTTVNGRRITPVEAKKQYLIPLFDQLDAYEITIQYQTSSRFDFLTTTRQIPFPQISQRVLETDWKFVLPAGTQLMEGPLNMVLQQPLPEESLTRRFLGVLGKSNHKQEFNRTEWDAIVLFPVKSGVLEIANVGNINLFSWIVLLLTVTTGLLLRVGNIKQRDKICIMGILISVILSWIFPFAWAQI 1023          
BLAST of mRNA_M-pyrifera_M_contig103771.809.1 vs. uniprot
Match: A0A517VCJ4_9PLAN (Uncharacterized protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VCJ4_9PLAN)

HSP 1 Score: 264 bits (675), Expect = 6.260e-78
Identity = 131/216 (60.65%), Postives = 167/216 (77.31%), Query Frame = 1
Query:    1 DVHEATITLDLSKTFEDKFLFRFPAAVKLISTSVNDRRITPIEAEGQFLVPLFDQLDTYRITIHYQTQAPENRLTASRQIPFPQINQRVLETDWNFIVPKGIRLLSGPANMVLQEPLPAESLTRRFLGVLGRESTANPTEGTEWNALVLFPVSFGTLETTNITESGILSWMMLLLTLFCGLLLRIFRVGLRDKICIVVALSALLLSWNLSYPLAQI 648
            DVHEA I LDLSKTF+DKFLFRFP  VKLIST+VN RRITP+EAE Q+L+PLFDQLD+Y+ITI YQT +  + LT +RQIPFPQI+QRVLETDWNF++P G +L+ GP NMVLQ+ LP ESLTRRFLG+LG+ + A     +EW+A+VLFPV  G LE  N+    + SW++LL T+  GL+LRI+ V  RDK+CI+  L +++LSW   +  A+I
Sbjct:  810 DVHEAAILLDLSKTFDDKFLFRFPKKVKLISTTVNGRRITPVEAEKQYLIPLFDQLDSYQITIQYQTSSRSDFLTTTRQIPFPQISQRVLETDWNFVLPTGTQLMEGPLNMVLQQSLPEESLTRRFLGILGKPNHAQGNNRSEWDAIVLFPVKSGVLEIANVGNVRLFSWIVLLSTVTVGLVLRIWNVKQRDKLCIMGILISVILSWVFPFAWAEI 1025          
BLAST of mRNA_M-pyrifera_M_contig103771.809.1 vs. uniprot
Match: A0A350KAU7_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KAU7_9PLAN)

HSP 1 Score: 262 bits (670), Expect = 2.880e-77
Identity = 132/216 (61.11%), Postives = 163/216 (75.46%), Query Frame = 1
Query:    1 DVHEATITLDLSKTFEDKFLFRFPAAVKLISTSVNDRRITPIEAEGQFLVPLFDQLDTYRITIHYQTQAPENRLTASRQIPFPQINQRVLETDWNFIVPKGIRLLSGPANMVLQEPLPAESLTRRFLGVLGRESTANPTEGTEWNALVLFPVSFGTLETTNITESGILSWMMLLLTLFCGLLLRIFRVGLRDKICIVVALSALLLSWNLSYPLAQI 648
            DVHEA I+LDLSKT +DKFLFRFP  VKLIST+VN RRITP+EAE Q+L+PLFDQLD Y ITI YQT +  + LT +RQIPFPQI+QRVLETDW F++P G +L+ GP NMVLQ+ LP ESLTRRFLGVLG+ +       TEW+A+VLFPV  G LE  N+    + SW++LLLT+  GLLLR+  +  RDKICI+  L +++LSW   +  AQI
Sbjct:  295 DVHEAAISLDLSKTLDDKFLFRFPNEVKLISTTVNGRRITPVEAEKQYLIPLFDQLDAYEITIQYQTNSSFDFLTTTRQIPFPQISQRVLETDWKFVLPAGTQLMEGPLNMVLQQSLPEESLTRRFLGVLGKSNHKQEFNRTEWDAIVLFPVKSGVLEIANVGNINLFSWIVLLLTVTTGLLLRVGNIKQRDKICIMGILISVILSWIFPFAWAQI 510          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103771.809.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2E7KJ71_9PLAN3.530e-13299.07Uncharacterized protein n=8 Tax=Gimesia TaxID=1649... [more]
A0A518A236_9PLAN7.680e-11687.96Uncharacterized protein n=3 Tax=Gimesia panareensi... [more]
UPI00119D450C5.400e-8462.50hypothetical protein n=1 Tax=Gimesia aquarii TaxID... [more]
A0A517X2P0_9PLAN5.610e-8462.50Uncharacterized protein n=1 Tax=Gimesia aquarii Ta... [more]
A0A518I813_9PLAN6.670e-8365.14Uncharacterized protein n=1 Tax=Gimesia fumaroli T... [more]
A0A517W1K9_9PLAN9.090e-8362.04Uncharacterized protein n=1 Tax=Gimesia aquarii Ta... [more]
A0A517RBA8_9PLAN3.730e-8162.50Uncharacterized protein n=2 Tax=Gimesia alba TaxID... [more]
A0A2D5GZQ6_9PLAN1.820e-7861.57Uncharacterized protein n=5 Tax=Gimesia TaxID=1649... [more]
A0A517VCJ4_9PLAN6.260e-7860.65Uncharacterized protein n=1 Tax=Gimesia algae TaxI... [more]
A0A350KAU7_9PLAN2.880e-7761.11Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103771contigM-pyrifera_M_contig103771:2..649 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score268.1
Seed ortholog evalue3.6e-69
Seed eggNOG ortholog344747.PM8797T_18334
Hectar predicted targeting categoryother localisation
EggNOG OGs2DQ75@1,2J0NI@203682,3351C@2
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size648
Cds size648
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815543.9893951-CDS-M-pyrifera_M_contig103771:1..6491622815543.9893951-CDS-M-pyrifera_M_contig103771:1..649Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103771 2..649 -
1692277456.8392792-CDS-M-pyrifera_M_contig103771:1..6491692277456.8392792-CDS-M-pyrifera_M_contig103771:1..649Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103771 2..649 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103771.809.1prot_M-pyrifera_M_contig103771.809.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103771 2..649 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103771.809.1

>prot_M-pyrifera_M_contig103771.809.1 ID=prot_M-pyrifera_M_contig103771.809.1|Name=mRNA_M-pyrifera_M_contig103771.809.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp
DVHEATITLDLSKTFEDKFLFRFPAAVKLISTSVNDRRITPIEAEGQFLV
PLFDQLDTYRITIHYQTQAPENRLTASRQIPFPQINQRVLETDWNFIVPK
GIRLLSGPANMVLQEPLPAESLTRRFLGVLGRESTANPTEGTEWNALVLF
PVSFGTLETTNITESGILSWMMLLLTLFCGLLLRIFRVGLRDKICIVVAL
SALLLSWNLSYPLAQI
back to top

mRNA from alignment at M-pyrifera_M_contig103771:2..649-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103771.809.1 ID=mRNA_M-pyrifera_M_contig103771.809.1|Name=mRNA_M-pyrifera_M_contig103771.809.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig103771:2..649- (Macrocystis pyrifera P11B4 male)
GACGTGCATGAGGCTACGATTACACTGGATCTGTCCAAGACATTTGAAGA TAAATTTCTGTTTCGGTTTCCAGCTGCGGTAAAACTGATCTCTACCTCTG TTAACGATCGCCGCATCACACCGATCGAGGCAGAAGGCCAGTTTCTGGTT CCGCTGTTCGACCAGTTGGATACATATCGAATTACGATTCACTACCAGAC CCAGGCACCGGAAAACCGGTTGACCGCCTCCAGACAGATTCCATTCCCCC AGATTAATCAGCGTGTCTTGGAGACAGACTGGAATTTCATCGTTCCCAAA GGAATCCGCCTGCTCAGCGGACCAGCAAATATGGTGCTGCAGGAACCTCT GCCGGCTGAATCATTGACACGTCGTTTTCTGGGAGTGCTGGGTAGAGAGT CTACCGCAAACCCGACTGAAGGGACTGAGTGGAATGCGCTGGTCTTATTT CCGGTGAGCTTCGGTACTTTGGAGACAACGAATATCACGGAATCTGGGAT TCTCTCCTGGATGATGCTGCTTTTAACTCTGTTCTGTGGATTGTTGCTGC GAATATTCCGCGTTGGTTTACGGGATAAAATCTGTATCGTGGTGGCATTG AGTGCTCTGTTACTTTCCTGGAACCTGTCTTACCCACTGGCCCAGATA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig103771:2..649-

>mRNA_M-pyrifera_M_contig103771.809.1 ID=mRNA_M-pyrifera_M_contig103771.809.1|Name=mRNA_M-pyrifera_M_contig103771.809.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig103771:2..649- (Macrocystis pyrifera P11B4 male)
GACGTGCATGAGGCTACGATTACACTGGATCTGTCCAAGACATTTGAAGA
TAAATTTCTGTTTCGGTTTCCAGCTGCGGTAAAACTGATCTCTACCTCTG
TTAACGATCGCCGCATCACACCGATCGAGGCAGAAGGCCAGTTTCTGGTT
CCGCTGTTCGACCAGTTGGATACATATCGAATTACGATTCACTACCAGAC
CCAGGCACCGGAAAACCGGTTGACCGCCTCCAGACAGATTCCATTCCCCC
AGATTAATCAGCGTGTCTTGGAGACAGACTGGAATTTCATCGTTCCCAAA
GGAATCCGCCTGCTCAGCGGACCAGCAAATATGGTGCTGCAGGAACCTCT
GCCGGCTGAATCATTGACACGTCGTTTTCTGGGAGTGCTGGGTAGAGAGT
CTACCGCAAACCCGACTGAAGGGACTGAGTGGAATGCGCTGGTCTTATTT
CCGGTGAGCTTCGGTACTTTGGAGACAACGAATATCACGGAATCTGGGAT
TCTCTCCTGGATGATGCTGCTTTTAACTCTGTTCTGTGGATTGTTGCTGC
GAATATTCCGCGTTGGTTTACGGGATAAAATCTGTATCGTGGTGGCATTG
AGTGCTCTGTTACTTTCCTGGAACCTGTCTTACCCACTGGCCCAGATAGA
CGTGCATGAGGCTACGATTACACTGGATCTGTCCAAGACATTTGAAGATA
AATTTCTGTTTCGGTTTCCAGCTGCGGTAAAACTGATCTCTACCTCTGTT
AACGATCGCCGCATCACACCGATCGAGGCAGAAGGCCAGTTTCTGGTTCC
GCTGTTCGACCAGTTGGATACATATCGAATTACGATTCACTACCAGACCC
AGGCACCGGAAAACCGGTTGACCGCCTCCAGACAGATTCCATTCCCCCAG
ATTAATCAGCGTGTCTTGGAGACAGACTGGAATTTCATCGTTCCCAAAGG
AATCCGCCTGCTCAGCGGACCAGCAAATATGGTGCTGCAGGAACCTCTGC
CGGCTGAATCATTGACACGTCGTTTTCTGGGAGTGCTGGGTAGAGAGTCT
ACCGCAAACCCGACTGAAGGGACTGAGTGGAATGCGCTGGTCTTATTTCC
GGTGAGCTTCGGTACTTTGGAGACAACGAATATCACGGAATCTGGGATTC
TCTCCTGGATGATGCTGCTTTTAACTCTGTTCTGTGGATTGTTGCTGCGA
ATATTCCGCGTTGGTTTACGGGATAAAATCTGTATCGTGGTGGCATTGAG
TGCTCTGTTACTTTCCTGGAACCTGTCTTACCCACTGGCCCAGATA
back to top