mRNA_M-pyrifera_M_contig103745.800.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103745.800.1 vs. uniprot
Match: D2VHD5_NAEGR (Guanine nucleotide-binding protein subunit beta-like protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VHD5_NAEGR) HSP 1 Score: 68.9 bits (167), Expect = 4.780e-11 Identity = 44/118 (37.29%), Postives = 60/118 (50.85%), Query Frame = 1 Query: 22 TLRGHESTVWSV-AANDRIIVSGSADCSARIWRAADGKFLRALRGHDGVVRAISID----TERPMF----------ATASGDMTVRLWVYDGGVQNPARAVRCRFIHRGHSAGVAAVQ 330 TLRGH ++ S+ R ++SGSADCS R+W K L+ L GH G VR+++ D TE + + SGD T+RLW V NP +C I +GH GV V+ Sbjct: 419 TLRGHTKSITSLHMIGSRFVISGSADCSVRVWDLQSKKCLQTLFGHSGWVRSVTSDFVDVTEGEEYERLIDDLKFVVSGSGDGTIRLW----DVSNPDLEEKCLRILKGHEGGVTCVK 532
BLAST of mRNA_M-pyrifera_M_contig103745.800.1 vs. uniprot
Match: UPI001CFD2363 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD2363) HSP 1 Score: 68.2 bits (165), Expect = 9.000e-11 Identity = 45/139 (32.37%), Postives = 67/139 (48.20%), Query Frame = 1 Query: 22 TLRGHESTVWSV-AANDRIIVSGSADCSARIWRAADGKFLRALRGHDGVVRAISIDT---------------ERPMFATASGDMTVRLWVYDGGVQNPARAVRCRFIHRGHSAGVAAVQVFDAN--VVSGDVAGTIIVW 384 TLRGH ++ ++ R ++SGSADC+ R+W ++ L GH G VR+++ D + + SGD T+RLW V NP +C + +GH GV V+ D N +VS V T+ VW Sbjct: 516 TLRGHTKSITAIHLIGSRFVISGSADCTVRVWDLHSKSLIQTLTGHTGWVRSVTSDISDFNAETDEYERLIDDLKFVVSGSGDGTIRLW----DVSNPDIEEKCIKVLKGHEGGVTCVKS-DTNGVIVSSSVDKTVKVW 649
BLAST of mRNA_M-pyrifera_M_contig103745.800.1 vs. uniprot
Match: A0A6A5BUZ3_NAEFO (Guanine nucleotide-binding protein subunit beta-like protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BUZ3_NAEFO) HSP 1 Score: 68.2 bits (165), Expect = 9.100e-11 Identity = 45/138 (32.61%), Postives = 67/138 (48.55%), Query Frame = 1 Query: 22 TLRGHESTVWSV-AANDRIIVSGSADCSARIWRAADGKFLRALRGHDGVVRAISID--------------TERPMFATASGDMTVRLWVYDGGVQNPARAVRCRFIHRGHSAGVAAVQVFDAN--VVSGDVAGTIIVW 384 TLRGH ++ ++ R ++SGSADC+ R+W ++ L GH G VR+++ D + + SGD T+RLW V NP +C + +GH GV V+ D N +VS V T+ VW Sbjct: 627 TLRGHTKSITAIHLIGSRFVISGSADCTVRVWDLHSRSLIQTLTGHTGWVRSVTSDFSDVSESDEYERLIDDLKFVVSGSGDGTIRLW----DVSNPDVEEKCVKVLKGHEGGVTCVKS-DINGVIVSSSVDKTVKVW 759
BLAST of mRNA_M-pyrifera_M_contig103745.800.1 vs. uniprot
Match: A0A7S4Q9I9_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q9I9_9DINO) HSP 1 Score: 62.4 bits (150), Expect = 4.550e-9 Identity = 36/80 (45.00%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 13 CVMTLRGHESTVWSVA--ANDRIIVSGSADCSARIWRAADGKFLRALRGHDGVVRAISIDTERP--MFATASGDMTVRLW 240 C +TL GHE V+SVA + +IVS SAD +AR+W ADG L L+GH VR ++R M T S D T LW Sbjct: 67 CGLTLAGHEEPVFSVAFSRDGSLIVSASADRTARVWSCADGACLAVLKGHKAEVRKACFGSKRTAGMVVTGSSDGTAALW 146
BLAST of mRNA_M-pyrifera_M_contig103745.800.1 vs. uniprot
Match: A0A1B6L0B0_9HEMI (PFU domain-containing protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6L0B0_9HEMI) HSP 1 Score: 61.2 bits (147), Expect = 2.150e-8 Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 1 Query: 13 CVMTLRGHESTVWSVA--ANDRIIVSGSADCSARIWRAADGKFLRALRGHDGVVRAISIDTERPMFATASGDMTVRLWVYDGG 255 CV+TL GHE TVWSV AN I V+GSAD + R++ + DG +LR L GH VR+++ + + + A+ D T+R W D G Sbjct: 139 CVLTLTGHELTVWSVLQMANGTI-VTGSADKTIRVY-SPDGTYLRTLTGHKDCVRSLAAQSAVELLSCAN-DATIRKWNVDTG 218
BLAST of mRNA_M-pyrifera_M_contig103745.800.1 vs. uniprot
Match: A0A1B6IU08_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6IU08_9HEMI) HSP 1 Score: 59.3 bits (142), Expect = 7.040e-8 Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 4 EAGCVMTLRGHESTVWSVA--ANDRIIVSGSADCSARIWRAADGKFLRALRGHDGVVRAISIDTERPMFATASGDMTVRLWVYDGG 255 E CV+TL GHE T+W V AN I V+GSAD + R++ + DG +LR L GH VR ++ ++ + + A+ D T+R W D G Sbjct: 136 EQECVLTLTGHELTIWRVLQMANGTI-VTGSADKTIRVY-SPDGTYLRTLTGHKDCVRDLAAESAVELLSCAN-DATIRKWNVDTG 218
BLAST of mRNA_M-pyrifera_M_contig103745.800.1 vs. uniprot
Match: A0A1B6GB58_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Proconiini TaxID=565685 RepID=A0A1B6GB58_9HEMI) HSP 1 Score: 59.3 bits (142), Expect = 1.090e-7 Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 4 EAGCVMTLRGHESTVWSVA--ANDRIIVSGSADCSARIWRAADGKFLRALRGHDGVVRAISIDTERPMFATASGDMTVRLWVYDGG 255 E CV+TL GHE T+W V AN I V+GSAD + R++ + DG +LR L GH VR ++ ++ + + A+ D T+R W D G Sbjct: 1 EQECVLTLTGHELTIWRVLQMANGTI-VTGSADKTIRVY-SPDGTYLRTLTGHKDCVRDLAAESAVELLSCAN-DATIRKWNVDTG 83
BLAST of mRNA_M-pyrifera_M_contig103745.800.1 vs. uniprot
Match: A0A1R2AN05_9CILI (Ion_trans domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AN05_9CILI) HSP 1 Score: 59.3 bits (142), Expect = 1.150e-7 Identity = 29/107 (27.10%), Postives = 56/107 (52.34%), Query Frame = 1 Query: 67 DRIIVSGSADCSARIWRAADGKFLRALRGHDGVVRAISIDTERPMFATASGDMTVRLWVYDGGVQNPARAVRCRFIHRGHSAGVAAVQVFDANVVSGDVAGTIIVWS 387 D+ + S + +W GK + A+ GHD V+ + ID + + T S D ++++W D R+ I H AG+ +++++ N++SGD+ G I++W+ Sbjct: 149 DKKFIIASKNTLLELWHEKKGK-IYAVGGHDDVITCMRIDESKKIIYTGSSDYSIKVWDIDEDTIEETRS-----IDEAHKAGIVVLELYNENLISGDLDGEILIWN 249
BLAST of mRNA_M-pyrifera_M_contig103745.800.1 vs. uniprot
Match: A0A367K246_RHIST (Elongator complex protein 2 n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367K246_RHIST) HSP 1 Score: 58.9 bits (141), Expect = 1.510e-7 Identity = 32/68 (47.06%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 64 NDRIIVSGSADCSARIWRA-ADGKFLRA--LRGHDGVV------RAISIDTERPMFATASGDMTVRLW 240 ND +VSGSADC+A+IW+ A GK++ + L GH G + RA SIDTE+ + T S D T+R+W Sbjct: 75 NDIALVSGSADCTAKIWKTDATGKWINSATLEGHTGSIETIACMRAQSIDTEQDLIVTGSSDGTIRIW 142
BLAST of mRNA_M-pyrifera_M_contig103745.800.1 vs. uniprot
Match: A0A0F4YMF1_TALEM (Uncharacterized protein n=1 Tax=Rasamsonia emersonii CBS 393.64 TaxID=1408163 RepID=A0A0F4YMF1_TALEM) HSP 1 Score: 58.5 bits (140), Expect = 1.930e-7 Identity = 25/60 (41.67%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 16 VMTLRGHESTVWSVAANDRIIVSGSADCSARIWRAADGKFLRALRGHDGVVRAISIDTER 195 + L GHE TV ++AA+D +VSGS DC+ R+WR + G+ + L+GH + ++ +D ER Sbjct: 262 IHVLSGHEKTVRAIAAHDDTVVSGSYDCTVRVWRISTGESVHKLQGHTKNIYSVVLDHER 321 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103745.800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103745.800.1 >prot_M-pyrifera_M_contig103745.800.1 ID=prot_M-pyrifera_M_contig103745.800.1|Name=mRNA_M-pyrifera_M_contig103745.800.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp MTLRGHESTVWSVAANDRIIVSGSADCSARIWRAADGKFLRALRGHDGVVback to top mRNA from alignment at M-pyrifera_M_contig103745:260..646+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103745.800.1 ID=mRNA_M-pyrifera_M_contig103745.800.1|Name=mRNA_M-pyrifera_M_contig103745.800.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig103745:260..646+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103745:260..646+ >mRNA_M-pyrifera_M_contig103745.800.1 ID=mRNA_M-pyrifera_M_contig103745.800.1|Name=mRNA_M-pyrifera_M_contig103745.800.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig103745:260..646+ (Macrocystis pyrifera P11B4 male)back to top |