mRNA_M-pyrifera_M_contig103725.794.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103725.794.1 vs. uniprot
Match: A0A7W0YH28_9ACTN (Tetratricopeptide repeat protein n=2 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0YH28_9ACTN) HSP 1 Score: 78.2 bits (191), Expect = 5.390e-14 Identity = 56/154 (36.36%), Postives = 82/154 (53.25%), Query Frame = 1 Query: 4 VDRIPLALELVTSRLRSRPIASVLAELGESLD-SLSGARRTDQRHVGLKEALDWSIDLLDDDALPIYEALGVMVGAFRPRHLATMLDLPVAD----VARQVEALSDLSLVSPVAV--GDLPTFRALQTVGLHARSRLIERGRLEELSARHARVF 444 +D +PLA+EL +R+R ++LA LG L ++ GAR +R L++A+DWS DLLD ++ L VG + T+ P AD V V +L + SLV+ + G+ P F L+T+ +A RL E G EE+ RHA VF Sbjct: 399 LDGLPLAIELAAARVRLLSPQAILARLGSRLALAIGGARDVPERQRTLRQAIDWSHDLLDPAERKLFARLAAFVGGAGLEEIETVCG-PAADLGMDVLEAVGSLKEKSLVTTIGEDWGE-PRFSMLETIREYAAERLEESGEAEEIRRRHAEVF 550
BLAST of mRNA_M-pyrifera_M_contig103725.794.1 vs. uniprot
Match: A0A7C3PN87_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3PN87_9CHLR) HSP 1 Score: 77.4 bits (189), Expect = 1.010e-13 Identity = 49/149 (32.89%), Postives = 78/149 (52.35%), Query Frame = 1 Query: 4 VDRIPLALELVTSRLRSRPIASVLAELGESLDSLSG-ARRTDQRHVGLKEALDWSIDLLDDDALPIYEALGVMVGAFRPRHLATMLDLPVADVARQVEALSDLSLVSPVAVGD-LPTFRALQTVGLHARSRLIERGRLEELSARHARVF 444 +D +PLALEL +R++ ++L+ L + L L+G AR RH L+ L+WS LL++D +Y L V VG F + ++ D+ + +L+D SL+ D P F L+T+ +A RL E G + L +HA+ F Sbjct: 622 LDGLPLALELAAARVKLLSPQAILSRLDDQLKLLTGGARDLPTRHQTLRNTLEWSYSLLNEDEKKLYARLSVFVGGFTLEAAEAVCNVDGKDILEGLTSLADNSLLRQEEADDGEPRFGMLETIRAYAVERLAESGESDALHTKHAQYF 770
BLAST of mRNA_M-pyrifera_M_contig103725.794.1 vs. uniprot
Match: A0A662DYH0_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A662DYH0_9ACTN) HSP 1 Score: 75.9 bits (185), Expect = 3.420e-13 Identity = 50/142 (35.21%), Postives = 71/142 (50.00%), Query Frame = 1 Query: 4 VDRIPLALELVTSRLRSRPIASVLAELGESLDSLSGARR--TDQRHVGLKEALDWSIDLLDDDALPIYEALGVMVGAFRPRHLATMLD-LPVADVARQVEALSDLSLVSPVAVGDLPTFRALQTVGLHARSRLIERGRLEEL 420 +D +PLA+EL +R +L L E D L+G RR + R L+E +DWS DLLDDD +E L V G+F +LD ADV +E+L SL++ V +R L+T+ +A RL G E+ Sbjct: 293 LDGLPLAIELAAARANVLAPRELLQRLDERFDVLTGGRRRRSRDRQKTLRETVDWSYDLLDDDERHAFEQLSVFAGSFGLEGAEAVLDGFSAADVLDLIESLVSKSLLNAAVVDGFHRYRYLETIRSYAEERLDANGSTAEV 434
BLAST of mRNA_M-pyrifera_M_contig103725.794.1 vs. uniprot
Match: UPI001E65175F (hypothetical protein n=1 Tax=Pseudonocardia sp. TRM90224 TaxID=2812678 RepID=UPI001E65175F) HSP 1 Score: 75.9 bits (185), Expect = 3.480e-13 Identity = 55/149 (36.91%), Postives = 79/149 (53.02%), Query Frame = 1 Query: 1 AVDRIPLALELVTSRLRSRPIASVLAELGESLDSLSGA-RRTDQRHVGLKEALDWSIDLLDDDALPIYEALGVMVGAFRPRHL-ATMLD--LPVADVARQVEALSDLSLVSPVAV-GDLPTFRALQTVGLHARSRLIERGRLEELSARH 432 AVDR+PL +EL R+ +A + +G+ L L+G R QRH GL+ A+DWS +LLD+ + +GV G F AT+ D + V DVA + L D SLV+ VA+ G F L+TV +A +L + +ARH Sbjct: 453 AVDRLPLGIELAAGLTRTLSVAQLAGRVGDRLRLLTGGTRHAGQRHTGLRAAIDWSHELLDERERTVLRRVGVFAGGFVLEAAEATVPDGKVDVGDVAPALAELVDRSLVNVVAMPGGGRRFTLLETVREYALEQLTAHDEVLSTNARH 601
BLAST of mRNA_M-pyrifera_M_contig103725.794.1 vs. uniprot
Match: A0A8J3QU23_9ACTN (HTH luxR-type domain-containing protein n=1 Tax=Rugosimonospora africana TaxID=556532 RepID=A0A8J3QU23_9ACTN) HSP 1 Score: 73.9 bits (180), Expect = 1.620e-12 Identity = 53/147 (36.05%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 4 VDRIPLALELVTSRLRSRPIASVLAELGESLDSLSGARRTDQRHVGLKEALDWSIDLLDDDALPIYEALGVMVGAFRPRHLATMLDLPVA-DVARQVEALSDL---SLVSPVAVGDLPTFRALQTVGLHARSRLIERGRLEELSARH 432 +D +PLALEL +R S + +LA L + L L G R D+RH L++ +DWS LLDDD ++ LGV G F LA ++ + + D A ++ L L SLV+ G +R L+TV + A L G E + RH Sbjct: 258 LDGLPLALELAAARSASLGVPGLLAALDDQLRLLRGGRGGDERHRSLRDVIDWSYQLLDDDERSLFRTLGVFAGGF---DLAAVIAVASSEDRAAVIDLLGRLTSKSLVTRERTGHA-RWRLLETVRVFAADELRTEGEWEAVRRRH 400
BLAST of mRNA_M-pyrifera_M_contig103725.794.1 vs. uniprot
Match: A0A350G2Q9_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A350G2Q9_9CHLR) HSP 1 Score: 73.2 bits (178), Expect = 3.070e-12 Identity = 52/150 (34.67%), Postives = 76/150 (50.67%), Query Frame = 1 Query: 4 VDRIPLALELVTSRLRSRPIASVLAELGESLDSLSG-ARRTDQRHVGLKEALDWSIDLLDDDALPIYEALGVMVGAFRPRHLATMLDLP-VADVARQVEALSDLSLVSPVAVGD-LPTFRALQTVGLHARSRLIERGRLEELSARHARVF 444 +D +PLALEL +R++ ++LA L + L L+G AR RH L+ L+WS DLLD D +Y L V VG F ++ + D+ + +L + SL+ D P L+T+ +A RL E G LE L +HA F Sbjct: 618 LDGLPLALELAAARVKLLQPQAILARLDDKLKLLTGGARDLPTRHQTLRNTLEWSYDLLDQDEKILYARLSVFVGGFTFEAAESVCNSDGELDILEGLTSLINNSLIRQEDTPDGEPRLTMLETIRSYALERLTESGELETLRTKHAGYF 767
BLAST of mRNA_M-pyrifera_M_contig103725.794.1 vs. uniprot
Match: A0A136KV23_9CHLR (Transcriptional regulator, XRE family (Fragment) n=1 Tax=Chloroflexi bacterium OLB15 TaxID=1617416 RepID=A0A136KV23_9CHLR) HSP 1 Score: 72.8 bits (177), Expect = 3.690e-12 Identity = 50/150 (33.33%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 4 VDRIPLALELVTSRLRSRPIASVLAELGESLDSLSG-ARRTDQRHVGLKEALDWSIDLLDDDALPIYEALGVMVGAFRPRHLATMLDLPVA-DVARQVEALSDLSLVSPVA-VGDLPTFRALQTVGLHARSRLIERGRLEELSARHARVF 444 +D IPLA+EL +R+R P+ +L+ L L L+G AR +RH L++A++WS LL +D ++ LGV G + P L + + D+ ++L SL+ A + P F L+T+ A +LI G L+ + A HA F Sbjct: 222 LDGIPLAIELAAARIRLFPLPMLLSRLNHRLSLLTGGARDLAERHRTLRDAINWSYQLLSEDEKWLFRRLGVFAGGWAPEALEAIGSPELTQDIYEIFDSLIAKSLIKLAANSNEEPRFIMLETLREFALEQLITAGELDSVQALHAAYF 371
BLAST of mRNA_M-pyrifera_M_contig103725.794.1 vs. uniprot
Match: UPI001BA93AEC (adenylate/guanylate cyclase domain-containing protein n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=UPI001BA93AEC) HSP 1 Score: 72.8 bits (177), Expect = 4.100e-12 Identity = 51/151 (33.77%), Postives = 80/151 (52.98%), Query Frame = 1 Query: 4 VDRIPLALELVTSRLRSRPIASVLAELGESLDSLSGA-RRTDQRHVGLKEALDWSIDLLDDDALPIYEALGVMVGAFRPRHLATMLDLPVAD---VARQVEALSDLSLVSPVAVGDLPTFRALQTVGLHARSRLIERGRLEELSARHARVF 444 +D IPLA+E+ ++LR + S+ + + + LD S RR RH L++AL+WS DLLD ++ + + L V G+FR + +AD V ++ L + SL+S G R LQTV AR L + L+ + ARH+ V+ Sbjct: 399 LDCIPLAIEIAAAQLRRHTLGSIESGVTKPLDLQSSVFRRRTGRHQTLRQALEWSYDLLDPNSRRVLQRLSVFSGSFREEQALAVCAGDIADESEVLSGIDQLVETSLLSR-DFGGRHLLRMLQTVQAFAREMLDQTSLLQIVEARHSEVY 548
BLAST of mRNA_M-pyrifera_M_contig103725.794.1 vs. uniprot
Match: A0A519H1S8_9MICO (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Microbacterium sp. TaxID=51671 RepID=A0A519H1S8_9MICO) HSP 1 Score: 72.0 bits (175), Expect = 7.050e-12 Identity = 49/125 (39.20%), Postives = 65/125 (52.00%), Query Frame = 1 Query: 1 AVDRIPLALELVTSRLRSRPIASVLAELGESLDSL-SGARRTDQRHVGLKEALDWSIDLLDDDALPIYEALGVMVGAFRPRHLATMLDLP-VADVARQVEALSDLSLVSPVAVGDLPTFRALQTV 369 A++ +PLA+EL +R+R+ VL L +LD L SGAR +R L ++WS+DLL DDA + AL V G F +L V D VEAL + SL+ PTFR L TV Sbjct: 60 ALEGMPLAIELAAARIRALSPQQVLERLDSALDLLVSGARDLPERQRALSRTIEWSVDLLPDDARRAFAALSVFAGRFTLDSAEEVLRAAHVDDPLASVEALVEASLLHSTDQPGAPTFRYLSTV 184
BLAST of mRNA_M-pyrifera_M_contig103725.794.1 vs. uniprot
Match: A0A0Q9J2Q8_9MICO (DUF4062 domain-containing protein n=1 Tax=Agromyces sp. Soil535 TaxID=1736390 RepID=A0A0Q9J2Q8_9MICO) HSP 1 Score: 72.0 bits (175), Expect = 7.550e-12 Identity = 52/150 (34.67%), Postives = 75/150 (50.00%), Query Frame = 1 Query: 1 AVDRIPLALELVTSRLRSRPIASVLAELGESLDSL--SGARRTDQRHVGLKEALDWSIDLLDDDALPIYEALGVMVGAFRPRHLATMLDLPVADVARQVEALSDLSLVSPVAVGDLPTFRALQTVGLHARSRLIERGRLEELSARHARVF 444 A+D +PLA+EL +R R A + L E +D L +GA R +++ L +DWS++LLDDDA +++ALGV G F + ++ D V L + SLV G F L TV + R +G EL+ RHA F Sbjct: 370 ALDGLPLAIELAAARTRLLTPAELRERLSEGIDVLPTAGADRPERQRT-LARTIDWSVELLDDDARAVFDALGVFSGGFDLDAASAVVG---HDALETVGRLVNASLVVHETAGRSSRFTMLSTVRTASLDRAAAQGLAAELAERHAAHF 515 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103725.794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103725.794.1 >prot_M-pyrifera_M_contig103725.794.1 ID=prot_M-pyrifera_M_contig103725.794.1|Name=mRNA_M-pyrifera_M_contig103725.794.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp AVDRIPLALELVTSRLRSRPIASVLAELGESLDSLSGARRTDQRHVGLKEback to top mRNA from alignment at M-pyrifera_M_contig103725:86..529+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103725.794.1 ID=mRNA_M-pyrifera_M_contig103725.794.1|Name=mRNA_M-pyrifera_M_contig103725.794.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig103725:86..529+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103725:86..529+ >mRNA_M-pyrifera_M_contig103725.794.1 ID=mRNA_M-pyrifera_M_contig103725.794.1|Name=mRNA_M-pyrifera_M_contig103725.794.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig103725:86..529+ (Macrocystis pyrifera P11B4 male)back to top |