mRNA_M-pyrifera_M_contig103714.789.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103714.789.1 vs. uniprot
Match: A0A0L0DVE0_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DVE0_THETB) HSP 1 Score: 86.7 bits (213), Expect = 2.340e-17 Identity = 49/121 (40.50%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 1 RSAVQEIVTVNDLIFVVTRSGVCTVFEEGTLETVAQLNLQRDESIRSLFYNPCDESMLTASTYRGDGYRSLVLRSTKIADIKEREHSRYQYLFEAEHLGQESFVEFSADAQVILTYNGKSR 363 RS V EI+ +LIF +TR GVC F T+ V LN+ E +RSLFYN ++S++T S YR D + SL R+T + I + LFE+E L FVEF +LTY+ S+ Sbjct: 73 RSRVAEIIAAGELIFALTRHGVCAAFNRDTMTRVCYLNITPAEVVRSLFYNKVNKSIITVSVYRTDNFSSLRCRTTPLEHIARGQPDAGFALFESESLRWPGFVEFDDVNAKVLTYSAASK 193
BLAST of mRNA_M-pyrifera_M_contig103714.789.1 vs. uniprot
Match: A0A4S8JA86_MUSBA (Uncharacterized protein n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8JA86_MUSBA) HSP 1 Score: 84.7 bits (208), Expect = 1.120e-16 Identity = 50/117 (42.74%), Postives = 67/117 (57.26%), Query Frame = 1 Query: 1 RSAVQEIVTVNDLIFVVTRSGVCTVFEEGTLETVAQLNLQRDESIRSLFYNPCDESMLTASTYRGDGYRSLVLRSTKIADIKEREHSRYQYLFEAEHLGQESFVEFSADAQVILTYN 351 RS + EIV+V D+IF V +SG+C F T + + LN+ DE+IRS+FYN DES++T S Y D + SL R+T I I+ + LFE E L FVEF IL Y+ Sbjct: 41 RSKIIEIVSVKDVIFAVAQSGLCAAFSRTTNKRICFLNISPDETIRSIFYNKNDESLITVSVYASDHFSSLKCRTTPIEYIRRNQLDAGCPLFETESLKWPGFVEFIDMNCKILIYS 157
BLAST of mRNA_M-pyrifera_M_contig103714.789.1 vs. uniprot
Match: A0A8J5X2U8_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X2U8_DIALT) HSP 1 Score: 84.7 bits (208), Expect = 1.280e-16 Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 1 RSAVQEIVTVNDLIFVVTRSGVCTVFEEGTLETVAQLNLQRDESIRSLFYNPCDESMLTASTYRGDGYRSLVLRSTKIADIKEREHSRYQYLFEAEHLGQESFVEFSADAQVILTY 348 RS + EIV DL+F +T SGVC VF+ T + +N DE +RSLFYN +ES+++ S +R D + SL R+T + I+ RE +R LFE E L FVEF ++T+ Sbjct: 76 RSKIVEIVGAKDLLFGLTLSGVCAVFDRATRRRLCFVNTSPDEVVRSLFYNEANESLISVSVFRADNFSSLKCRTTPLDCIRAREPARGVSLFENECLKWPGFVEFDDVNGKVITH 191
BLAST of mRNA_M-pyrifera_M_contig103714.789.1 vs. uniprot
Match: A0A7S3EKM2_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKM2_9RHOD) HSP 1 Score: 84.0 bits (206), Expect = 2.380e-16 Identity = 47/119 (39.50%), Postives = 71/119 (59.66%), Query Frame = 1 Query: 1 RSAVQEIVTVNDLIFVVTRSGVCTVFEEGTLETVAQLNLQRDESIRSLFYNPCDESMLTASTYRGDGYRSLVLRSTKIADIKEREHSRYQYLFEAEHLGQESFVEFSADAQVILTYNGK 357 RS V EIV +DLIF +T++GVC F+ L+ + LN DE IRSL+ N + S++T S +R D + SL RST + ++++E + LFE+E L FVEF +LT++ + Sbjct: 117 RSKVTEIVASSDLIFTLTKTGVCIAFDRDKLKRICFLNATDDEVIRSLYLNKVNNSIITVSVFREDNFSSLRCRSTHLQYVRKKETNAGFALFESESLRWPGFVEFDDLNSKVLTFSSE 235
BLAST of mRNA_M-pyrifera_M_contig103714.789.1 vs. uniprot
Match: UPI0019D5B322 (uncharacterized protein LOC120666243 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D5B322) HSP 1 Score: 83.6 bits (205), Expect = 2.700e-16 Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 1 RSAVQEIVTVNDLIFVVTRSGVCTVFEEGTLETVAQLNLQRDESIRSLFYNPCDESMLTASTYRGDGYRSLVLRSTKIADIKEREHSRYQYLFEAEHLGQESFVEFSADAQVILTY 348 RS V EIV D++F ++RSG+C F+ T + +A LNL DE IRS+FYN ++S++T S Y D Y SL R+T + ++ E +FE+E L FVEF + +L Y Sbjct: 27 RSKVIEIVGAKDIVFALSRSGLCAAFDRVTNKRIAFLNLSPDEVIRSMFYNKYNDSLITISIYPSDNYGSLNCRTTPLEYVRRNELDAGFPIFESESLKWPGFVEFDSVNGKVLIY 142
BLAST of mRNA_M-pyrifera_M_contig103714.789.1 vs. uniprot
Match: UPI0019D6AA77 (uncharacterized protein LOC120701526 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D6AA77) HSP 1 Score: 82.4 bits (202), Expect = 7.220e-16 Identity = 48/126 (38.10%), Postives = 68/126 (53.97%), Query Frame = 1 Query: 1 RSAVQEIVTVNDLIFVVTRSGVCTVFEEGTLETVAQLNLQRDESIRSLFYNPCDESMLTASTYRGDGYRSLVLRSTKIADIKEREHSRYQYLFEAEHLGQESFVEFSADAQVILTYNGKSRYVSAF 378 RS + EIV D+IF ++RSG+C F+ T + VA LN DE IRS+ YN ++S++T S Y D YRSL R+T + ++ E +FE+E L FVEF + L Y + F Sbjct: 35 RSRIIEIVAAKDIIFALSRSGLCAAFDRVTNKRVAFLNSSPDEVIRSMLYNKYNDSLITVSLYSSDSYRSLNCRATPLECVRRNELDAGFPIFESESLKWPGFVEFDSVNGKALIYAAQEGIYKVF 160
BLAST of mRNA_M-pyrifera_M_contig103714.789.1 vs. uniprot
Match: A0A161Y9J3_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A161Y9J3_DAUCS) HSP 1 Score: 67.0 bits (162), Expect = 9.160e-11 Identity = 41/121 (33.88%), Postives = 64/121 (52.89%), Query Frame = 1 Query: 1 RSAVQEIVTVNDLIFVVTRSGVCTVFEEGTLETVAQLNLQRDESIRSLFYNPCDESMLTASTYRGDGYRSLVLRSTKIADIKEREHSRYQYLFEAEHLGQESFVEFSADAQVILTYNGKSR 363 RS V EI++ ++F SGVC F GT + + LN+ E I+ +FYN CD+S++T S D + S RST I I+ + + LFE+ L + FV+F +T++ + R Sbjct: 4 RSKVVEILSARGVVFARVESGVCVAFSRGTNQRLCFLNVS-GEIIQDIFYNKCDDSIITVSISESDNFSSFKCRSTGIEYIRRAQPNAGFTLFESLSLKRPGFVDFDDLDSNAVTFSVEER 123
BLAST of mRNA_M-pyrifera_M_contig103714.789.1 vs. uniprot
Match: UPI0007EFF03D (uncharacterized protein LOC108221574 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EFF03D) HSP 1 Score: 66.6 bits (161), Expect = 2.830e-10 Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 1 RSAVQEIVTVNDLIFVVTRSGVCTVFEEGTLETVAQLNLQRDESIRSLFYNPCDESMLTASTYRGDGYRSLVLRSTKIADIKEREHSRYQYLFEAEHLGQESFVEF 318 RS V EI++ ++F SGVC F GT + + LN+ E I+ +FYN CD+S++T S D + S RST I I+ + + LFE+ L + FV+F Sbjct: 58 RSKVVEILSARGVVFARVESGVCVAFSRGTNQRLCFLNVS-GEIIQDIFYNKCDDSIITVSISESDNFSSFKCRSTGIEYIRRAQPNAGFTLFESLSLKRPGFVDF 162
BLAST of mRNA_M-pyrifera_M_contig103714.789.1 vs. uniprot
Match: A0A5P1EJZ4_ASPOF (Uncharacterized protein n=4 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EJZ4_ASPOF) HSP 1 Score: 51.2 bits (121), Expect = 7.070e-5 Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 1 Query: 1 RSAVQEIVTVNDLIFVVTRSGVCTVFEEGTLETVAQLNLQRDESIRSLFYNPCDESMLT 177 RS + EIV V D+IFV++ SG F T E + LN D+ I+ +FYN C+ES++T Sbjct: 115 RSKIAEIVAVKDIIFVLSESGRGAAFSLQTKEHLCFLNTSPDQVIKGIFYNKCNESLIT 173 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103714.789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103714.789.1 >prot_M-pyrifera_M_contig103714.789.1 ID=prot_M-pyrifera_M_contig103714.789.1|Name=mRNA_M-pyrifera_M_contig103714.789.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp RSAVQEIVTVNDLIFVVTRSGVCTVFEEGTLETVAQLNLQRDESIRSLFYback to top mRNA from alignment at M-pyrifera_M_contig103714:170..650- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103714.789.1 ID=mRNA_M-pyrifera_M_contig103714.789.1|Name=mRNA_M-pyrifera_M_contig103714.789.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=481bp|location=Sequence derived from alignment at M-pyrifera_M_contig103714:170..650- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103714:170..650- >mRNA_M-pyrifera_M_contig103714.789.1 ID=mRNA_M-pyrifera_M_contig103714.789.1|Name=mRNA_M-pyrifera_M_contig103714.789.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig103714:170..650- (Macrocystis pyrifera P11B4 male)back to top |