mRNA_M-pyrifera_M_contig103702.787.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103702.787.1 vs. uniprot
Match: UPI001965738D (hypothetical protein n=1 Tax=Nakamurella leprariae TaxID=2803911 RepID=UPI001965738D) HSP 1 Score: 68.9 bits (167), Expect = 3.450e-11 Identity = 54/129 (41.86%), Postives = 71/129 (55.04%), Query Frame = 1 Query: 19 TRKLLIAAGVSSSAIDRRITAGALRSFGNGVVGLVAAPD---GHRQLARACLLAHPDGALSHVAAAYLHGLPMG-DIVWAPHLVVP-HGRSRSTSSPALVRQSRRLPATDLTIVEGLRTTTVARTLADL 390 TR+ L+ AG + + + RR+ +G L GV VA D +R A L P G +SH +AA LHGLP+G + A HL VP H R TS A VR + +L D+ +GLR T+VARTL DL Sbjct: 10 TRRALLDAGHTPAELSRRVRSGELVRLAGGVFRTVAETDPIADYRDRVVARALKAPTGVVSHASAAALHGLPLGRSELGAVHLTVPPHWGGRRTS--AFVRHAAQLDDGDVIGTDGLRITSVARTLVDL 136
BLAST of mRNA_M-pyrifera_M_contig103702.787.1 vs. uniprot
Match: A0A5P8YUD6_9MICO (Uncharacterized protein n=2 Tax=Curtobacterium flaccumfaciens TaxID=2035 RepID=A0A5P8YUD6_9MICO) HSP 1 Score: 57.8 bits (138), Expect = 3.560e-7 Identity = 51/131 (38.93%), Postives = 68/131 (51.91%), Query Frame = 1 Query: 37 AAGVSSSAIDRRITAGALRSFGNGVVGLVAAPDGHRQLARACLLAH------------PDGALSHVAAAYLHGLPMGDIVWAPHLVVPHGRSRSTSSPALVRQSRR-LPATDLTIVEGLRTTTVARTLADL 390 AAG++ S + RR+ AG L GV L P + RA LA PD + AAA+ H + GD+ AP+L+ R +ST VR SRR LPA+D+TI++GL TT RT+ADL Sbjct: 27 AAGIARSTLVRRVQAGTLLRVRPGVYRLPGTPAERLEDIRAAWLASDPATLARDRLATPDVVVGGAAAAWSHEI--GDLYPAPYLLYTSKRRQSTHDD--VRYSRRSLPASDVTILDGLPVTTRERTIADL 153
BLAST of mRNA_M-pyrifera_M_contig103702.787.1 vs. uniprot
Match: UPI001FE572D2 (type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein n=1 Tax=Cellulomonas telluris TaxID=2306636 RepID=UPI001FE572D2) HSP 1 Score: 57.4 bits (137), Expect = 4.620e-7 Identity = 51/135 (37.78%), Postives = 69/135 (51.11%), Query Frame = 1 Query: 1 RSDWVSTRKLLIAAGVSSSAIDRRITAGALRSFGNGVVGLVAAPDGHRQLARACLLAH-PDGALSHVAAAYLHGL---PMGDIVWAPHLVVPHGRSRSTSSPALVRQSRRLPATDLTIVEGLRTTTVARTLADLV 393 R D V T L+ AG S + RR+ +G + GVV L + P RQ ARA L+A P ALSHV+AAY+HG+ P +V + VP R + +VR+ RR+P + L TT T+ DLV Sbjct: 32 RRDGVVTTDELVRAGTSRGRVARRVASGEWQRLHRGVVLLQSGPPTWRQSARAALVAAGPGAALSHVSAAYVHGIVRRPGTQVV----VSVPVERYVRPHAGVVVRRRRRMPP----VCGRLPATTREATVLDLV 158
BLAST of mRNA_M-pyrifera_M_contig103702.787.1 vs. uniprot
Match: UPI001EE43F2B (hypothetical protein n=1 Tax=Salsipaludibacter albus TaxID=2849650 RepID=UPI001EE43F2B) HSP 1 Score: 57.0 bits (136), Expect = 5.940e-7 Identity = 49/120 (40.83%), Postives = 59/120 (49.17%), Query Frame = 1 Query: 37 AAGVSSSAIDRRITAGALRSFGNGVVGLVAAPDGHRQLARACLLA-HPDGALSHVAAAYLHGLPMGDIVWAP-HLVVPHGRSRSTSSPALVRQSRRLPATDLTIVEGLRTTTVARTLADL 390 AAG+ +S RI G GV + AP + A LLA PD LSH A LHGL P H VVP+ + + +SRRL D TIV+GLRTTT ARTL D+ Sbjct: 21 AAGIPTSTWYDRINREEWFDCGAGVRLVPGAPVTMQTRHHAALLALGPDALLSHDTALALHGLARSRTARLPVHAVVPYDTTTLPPFATIRHRSRRLTQVDATIVDGLRTTTPARTLLDV 140
BLAST of mRNA_M-pyrifera_M_contig103702.787.1 vs. uniprot
Match: A0A538ILB0_9ACTN (DUF559 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538ILB0_9ACTN) HSP 1 Score: 56.6 bits (135), Expect = 8.160e-7 Identity = 47/127 (37.01%), Postives = 61/127 (48.03%), Query Frame = 1 Query: 13 VSTRKLLIAAGVSSSAIDRRITAGALRSFGNGVVGLVAAP-DGHRQLARACLLAHPDGALSHVAAAYLHGLPMGDIVWAPHLVVPHGRSRSTSSPALVRQSRRLPATDLTIVEGLRTTTVARTLADL 390 + TR ++ GV S I RR+ G GV A+P R L ACL++ P SH AAA L L AP + V RS + V + R LP D+T V+G+ TTVARTL D+ Sbjct: 25 IFTRSQALSLGVPRSTIARRLAGGVWVQLFPGVYAFAASPVTWRRSLLSACLVSGPSAVASHRAAASLWELAG---FTAPVIEVSVPRSCKRARADAVHRPRLLPRADVTRVDGIPVTTVARTLVDI 148
BLAST of mRNA_M-pyrifera_M_contig103702.787.1 vs. uniprot
Match: UPI001C0715C9 (hypothetical protein n=1 Tax=Nocardia albiluteola TaxID=2842303 RepID=UPI001C0715C9) HSP 1 Score: 56.6 bits (135), Expect = 8.510e-7 Identity = 49/131 (37.40%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 19 TRKLLIAAGVSSSAIDRRITAGALRSFGNG-----VVGLVAAPDGHRQLARACLLAHPDGAL-SHVAAAYLHGLPMGDI-VWAPHLVVPHGRSRSTSSPALVRQSRRLPATDLTIVEGLRTTTVARTLADL 390 +R+ +AAG+S + R G+ NG + AP+ HR L RA + A + A+ SHV+A HGLP +I + HL P R S +V S RL D+T+VEG+R TTVART+ D+ Sbjct: 8 SRRDALAAGLSDGDLRRLCRHGSWHRIRNGHYVAAPATALTAPERHRALIRATVAATSETAVVSHVSALIGHGLPTWNIPLDRAHLTRPR-RGGSRLGRVIVVHSGRLEHDDVTLVEGIRHTTVARTVVDI 137
BLAST of mRNA_M-pyrifera_M_contig103702.787.1 vs. uniprot
Match: UPI001F367D82 (type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein n=1 Tax=Brevibacterium daeguense TaxID=909936 RepID=UPI001F367D82) HSP 1 Score: 56.2 bits (134), Expect = 1.210e-6 Identity = 46/129 (35.66%), Postives = 63/129 (48.84%), Query Frame = 1 Query: 46 VSSSAIDRRITAGALRSFGNGVVGLVAAPDGHRQLARACLLAHPD-------------GALSHVAAAYLHGLPMGDIVW-APHLVVPHGRSRSTSSPALVRQSRRLPATDLTIVEGLRTTTVARTLADL 390 +S + R AG + G+GV + + D H L A L PD G SH AAA LHGL GD++ P +P+ R +S A+ L ++D+T+VEGL TTTV RT+ DL Sbjct: 31 ISRLQLSRLARAGVIERVGHGVYSMASNNDPHVTLRAAWLTLDPDLTAEERLSRIPETGVTSHAAAAGLHGL--GDLLDDEPEFTLPY---RKQTSRAIKLHKAELSSSDVTLVEGLPTTTVERTIRDL 154
BLAST of mRNA_M-pyrifera_M_contig103702.787.1 vs. uniprot
Match: UPI0015F4C268 (hypothetical protein n=1 Tax=unclassified Actinotalea TaxID=2638618 RepID=UPI0015F4C268) HSP 1 Score: 55.5 bits (132), Expect = 2.010e-6 Identity = 38/90 (42.22%), Postives = 53/90 (58.89%), Query Frame = 1 Query: 133 DGHRQLARACLLA-----HPDGALSHVAAAYLHGLPMGDIVWAPHLVVPHGRSRSTSSPALVRQSRRLPATDLTIVEGLRTTTVARTLAD 387 D R LA A ++A D LSH +AA L GLP H+V P +RST+SP +VR+ R L A D+ +++GLRTT++ RT+ D Sbjct: 39 DARRTLALARIVAIGAQLTSDTVLSHTSAALLWGLPTLRTPTVTHVVQPFS-ARSTASPDVVRRRRTLTAEDVVVLQGLRTTSLERTVVD 127
BLAST of mRNA_M-pyrifera_M_contig103702.787.1 vs. uniprot
Match: UPI001CD4FA43 (type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein n=1 Tax=Nocardia sp. alder85J TaxID=2862949 RepID=UPI001CD4FA43) HSP 1 Score: 55.5 bits (132), Expect = 2.130e-6 Identity = 48/134 (35.82%), Postives = 66/134 (49.25%), Query Frame = 1 Query: 19 TRKLLIAAGVSSSAIDRRITAGALRSFGNG-----VVGLVAAPDGHRQLARACLLAHPDGAL-SHVAAAYLHGLPMGDIVWAPHLVVPH----GRSRSTSSPALVRQSRRLPATDLTIVEGLRTTTVARTLADL 390 +R+ +AAG+S + + R G G V AP+ HR L A + + D A+ SHV+AA LHGLP VW L H R+ L+ S L ++T+V+G+R TTVARTL DL Sbjct: 8 SRRAALAAGLSDTDLHRLCRHGLWHRLRAGHYLPAPAAAVPAPERHRLLVHATVASASDSAVVSHVSAAVLHGLP----VWRLRLDRAHLTRNRRNGGRRGTRLMVHSALLEPAEITVVDGVRCTTVARTLIDL 137
BLAST of mRNA_M-pyrifera_M_contig103702.787.1 vs. uniprot
Match: A0A7W0MUK6_9ACTN (Type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7W0MUK6_9ACTN) HSP 1 Score: 55.1 bits (131), Expect = 2.910e-6 Identity = 47/136 (34.56%), Postives = 62/136 (45.59%), Query Frame = 1 Query: 1 RSDWVSTRKLLIAAGVSSSAIDRRITAGALRSFGNGVVGLVAAPDGHRQLAR------ACLLAHPDGALSHVAAAYLHGLPMGDIVWAPHLVVPHGRSRSTSSPALVRQSRRLPATDLTIVEGLRTTTVARTLADL 390 R V+ R+ L+A +S+ I R+ G L GV + GH +L R A L P ALSH AA LHG+ L+ R + P + LPA +L V+G+R TTVARTL DL Sbjct: 30 RQHGVAARRQLLALALSAKEIAYRVRIGRLHEIHRGVYAI-----GHSRLTRRGRWMAAILAGGPGAALSHRDAAALHGIRADSRT----LIEITTSRRRGARPGIQAHRATLPADELIAVDGIRATTVARTLVDL 156 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103702.787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103702.787.1 >prot_M-pyrifera_M_contig103702.787.1 ID=prot_M-pyrifera_M_contig103702.787.1|Name=mRNA_M-pyrifera_M_contig103702.787.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=131bp RSDWVSTRKLLIAAGVSSSAIDRRITAGALRSFGNGVVGLVAAPDGHRQLback to top mRNA from alignment at M-pyrifera_M_contig103702:215..607+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103702.787.1 ID=mRNA_M-pyrifera_M_contig103702.787.1|Name=mRNA_M-pyrifera_M_contig103702.787.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=393bp|location=Sequence derived from alignment at M-pyrifera_M_contig103702:215..607+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103702:215..607+ >mRNA_M-pyrifera_M_contig103702.787.1 ID=mRNA_M-pyrifera_M_contig103702.787.1|Name=mRNA_M-pyrifera_M_contig103702.787.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig103702:215..607+ (Macrocystis pyrifera P11B4 male)back to top |