mRNA_M-pyrifera_M_contig103660.783.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103660.783.1
Unique NamemRNA_M-pyrifera_M_contig103660.783.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig103660.783.1 vs. uniprot
Match: A0A2E1KTP3_9PLAN (Cytochrome c domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E1KTP3_9PLAN)

HSP 1 Score: 346 bits (888), Expect = 5.510e-108
Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 1 
Query:    1 GDHRPRPEVLHGDSSANIKQELASFSTSHGLKVNLFASEQDGLTSPLNLRWDPEGRMYVTVTTTYPHVFPGDVPNDKIIVLEDTDHDGRADRSHVFAEGLNIPTGIELGDGGVYVGQNTELLFLXXXXXXXXXDERRVVLGGFGNGDSHQTINSFVWTPGGELFFGHGDGCESRVETPWGISRLFNAGYFRFRPRRLHLVPCMEGEMAAGNPWGVA 648
            G  RP PEVLHGD +A++++ELASFST  GL+VNLFASE++GLTSPL +RWDP GRMYV VTTTYPHVFPGDVPNDKII+L D DHDGRAD S VFA+GLNIPTG+E G GGVYVGQNTE    XXXXXXXXX  RRVVLGGFGNGDSHQTINSF+W+P GELFFGHGDGCESRVETPWGIS LFNAG++RFRPRRLHLVP +EG M  GNPWG+A
Sbjct:  315 GHGRPDPEVLHGDPTADVERELASFSTVDGLQVNLFASEREGLTSPLAIRWDPAGRMYVAVTTTYPHVFPGDVPNDKIIMLTDIDHDGRADHSTVFADGLNIPTGLEWGHGGVYVGQNTEXXXXXXXXXXXXXXXRRVVLGGFGNGDSHQTINSFIWSPDGELFFGHGDGCESRVETPWGISSLFNAGFYRFRPRRLHLVPFLEGHMGPGNPWGIA 530
[Close]
BLAST of mRNA_M-pyrifera_M_contig103660.783.1 vs. uniprot
Match: A0A351G086_9PLAN (Cytochrome c domain-containing protein n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A351G086_9PLAN)

HSP 1 Score: 340 bits (873), Expect = 7.410e-106
Identity = 167/216 (77.31%), Postives = 188/216 (87.04%), Query Frame = 1 
Query:    1 GDHRPRPEVLHGDSSANIKQELASFSTSHGLKVNLFASEQDGLTSPLNLRWDPEGRMYVTVTTTYPHVFPGDVPNDKIIVLEDTDHDGRADRSHVFAEGLNIPTGIELGDGGVYVGQNTELLFLXXXXXXXXXDERRVVLGGFGNGDSHQTINSFVWTPGGELFFGHGDGCESRVETPWGISRLFNAGYFRFRPRRLHLVPCMEGEMAAGNPWGVA 648
            GD+RP PE LHGD SA++++ELASF+   GL+VNLFASE+ GLTSPL +RWDP GRMYVTVTTTYPHVFPGD+PNDKII+LEDT+HDGRAD+S VFA+ LNIPTGIE GDGG+YVGQNTE    XXXXXXXXX ERRVVL GFGNGDSHQTINSF W+P GEL FGHGDGCESRVETPWG S LFNAG++RF P+RLHL+P +EG M  GNPWGVA
Sbjct:  314 GDNRPAPENLHGDPSADVEKELASFTVPEGLQVNLFASERHGLTSPLAVRWDPAGRMYVTVTTTYPHVFPGDLPNDKIILLEDTNHDGRADKSTVFADHLNIPTGIEWGDGGIYVGQNTEXXXXXXXXXXXXXXERRVVLSGFGNGDSHQTINSFAWSPDGELHFGHGDGCESRVETPWGASNLFNAGFYRFTPKRLHLIPYLEGHMGPGNPWGVA 529
[Close]
BLAST of mRNA_M-pyrifera_M_contig103660.783.1 vs. uniprot
Match: A0A2E7L4Y5_9PLAN (Cytochrome c domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7L4Y5_9PLAN)

HSP 1 Score: 336 bits (862), Expect = 2.870e-104
Identity = 166/216 (76.85%), Postives = 186/216 (86.11%), Query Frame = 1 
Query:    1 GDHRPRPEVLHGDSSANIKQELASFSTSHGLKVNLFASEQDGLTSPLNLRWDPEGRMYVTVTTTYPHVFPGDVPNDKIIVLEDTDHDGRADRSHVFAEGLNIPTGIELGDGGVYVGQNTELLFLXXXXXXXXXDERRVVLGGFGNGDSHQTINSFVWTPGGELFFGHGDGCESRVETPWGISRLFNAGYFRFRPRRLHLVPCMEGEMAAGNPWGVA 648
            G +RP PE+LHGD+ A+I +ELA+FST  G +VNLFASE++GLTSPL +RWDP GR YV VTTTYPHVFPGD+PNDKII+LEDTD DG ADRS VFAEGLNIPTGIE G+GGVYVGQNTE    XXXXXXXXX  R+VVLGGFGNGDSHQTINSF W+P GELFFGHGDGCESRVETPWG S LFNAG++RFRPRRL L+P +EG M  GNPWG+A
Sbjct:  319 GANRPEPEILHGDADADIDEELAAFSTWEGFEVNLFASEREGLTSPLAIRWDPAGRAYVAVTTTYPHVFPGDLPNDKIIMLEDTDADGVADRSTVFAEGLNIPTGIEWGEGGVYVGQNTEXXXXXXXXXXXXXXVRKVVLGGFGNGDSHQTINSFFWSPDGELFFGHGDGCESRVETPWGASHLFNAGFYRFRPRRLQLIPFLEGHMGPGNPWGIA 534
[Close]
BLAST of mRNA_M-pyrifera_M_contig103660.783.1 vs. uniprot
Match: A0A3D2V557_9PLAN (Cytochrome c domain-containing protein n=5 Tax=Planctomycetia TaxID=203683 RepID=A0A3D2V557_9PLAN)

HSP 1 Score: 333 bits (853), Expect = 5.020e-103
Identity = 157/216 (72.69%), Postives = 175/216 (81.02%), Query Frame = 1 
Query:    1 GDHRPRPEVLHGDSSANIKQELASFSTSHGLKVNLFASEQDGLTSPLNLRWDPEGRMYVTVTTTYPHVFPGDVPNDKIIVLEDTDHDGRADRSHVFAEGLNIPTGIELGDGGVYVGQNTELLFLXXXXXXXXXDERRVVLGGFGNGDSHQTINSFVWTPGGELFFGHGDGCESRVETPWGISRLFNAGYFRFRPRRLHLVPCMEGEMAAGNPWGVA 648
            G  RP PE L    SANIK+ELA+F+   G  VNLFAS+Q GLTSPL++RWD  GRMYVTVTTTYPHVFPGDVPNDKII++ED D DG ADRS VFA+GLNIPTG+ELGDGGVYVGQNTE+LFL         DER VVLGGFGNGDSHQTINSF+W+PGGEL+FG GDGCESRVETPWG S LF AG++RFRPRRL L P ++  M  GNPWGVA
Sbjct:  314 GHRRPEPEKLFAHPSANIKEELAAFNLPDGFSVNLFASDQHGLTSPLSMRWDTSGRMYVTVTTTYPHVFPGDVPNDKIIIIEDVDKDGVADRSTVFADGLNIPTGLELGDGGVYVGQNTEILFLKDTDGDLIADEREVVLGGFGNGDSHQTINSFIWSPGGELYFGQGDGCESRVETPWGSSDLFQAGFYRFRPRRLKLDPLLDDFMGPGNPWGVA 529
[Close]
BLAST of mRNA_M-pyrifera_M_contig103660.783.1 vs. uniprot
Match: A0A2E6NPJ6_9BACT (Cytochrome C (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E6NPJ6_9BACT)

HSP 1 Score: 324 bits (831), Expect = 1.020e-102
Identity = 161/216 (74.54%), Postives = 184/216 (85.19%), Query Frame = 1 
Query:    1 GDHRPRPEVLHGDSSANIKQELASFSTSHGLKVNLFASEQDGLTSPLNLRWDPEGRMYVTVTTTYPHVFPGDVPNDKIIVLEDTDHDGRADRSHVFAEGLNIPTGIELGDGGVYVGQNTELLFLXXXXXXXXXDERRVVLGGFGNGDSHQTINSFVWTPGGELFFGHGDGCESRVETPWGISRLFNAGYFRFRPRRLHLVPCMEGEMAAGNPWGVA 648
            G +RP PE LHGD  A+I++EL +F+   G +VNLFASE++GLTSPL +RWDP GRMYVTVTT YPHV+PGDVPNDKII +EDTD+DG+AD+S VFAEGLNIPTG+E GDGGVYVGQNTEL   XXXXXXXXX  RRVVLGGFGNGDSHQTINSFVW+PGGEL+FG GDGCESRVETPWG S LF AG++RFRP+RL L P ++  M  GNPWGVA
Sbjct:  310 GPNRPAPEKLHGDPGADIEKELEAFTVLDGFEVNLFASEREGLTSPLAVRWDPSGRMYVTVTTVYPHVWPGDVPNDKIIAIEDTDNDGKADKSTVFAEGLNIPTGMEWGDGGVYVGQNTELXXXXXXXXXXXXXTRRVVLGGFGNGDSHQTINSFVWSPGGELYFGQGDGCESRVETPWGSSDLFQAGFYRFRPKRLQLHPLLDDFMGPGNPWGVA 525
[Close]
BLAST of mRNA_M-pyrifera_M_contig103660.783.1 vs. uniprot
Match: A0A3B9D173_9PLAN (Cytochrome c domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B9D173_9PLAN)

HSP 1 Score: 330 bits (847), Expect = 4.090e-102
Identity = 160/216 (74.07%), Postives = 184/216 (85.19%), Query Frame = 1 
Query:    1 GDHRPRPEVLHGDSSANIKQELASFSTSHGLKVNLFASEQDGLTSPLNLRWDPEGRMYVTVTTTYPHVFPGDVPNDKIIVLEDTDHDGRADRSHVFAEGLNIPTGIELGDGGVYVGQNTELLFLXXXXXXXXXDERRVVLGGFGNGDSHQTINSFVWTPGGELFFGHGDGCESRVETPWGISRLFNAGYFRFRPRRLHLVPCMEGEMAAGNPWGVA 648
            G  RP+PE LHG + AN+++EL +FS + GL VNLFASE DGLTSPLNLRWD  GRMYVTVTTTYPH+FPGD+PNDKII+LEDTD+DG AD+S VFAEGLNIPTGIE+G+GG+YVGQNTE    XXXXXXXXX     + GGFGNGDSHQTINSF+W+PGGEL+FGHGDGCESRVETPWG+S LFNAGY+  RPRR  L+P +EG M+AGNPWG A
Sbjct:  328 GLQRPKPETLHGVAEANVEEELKAFSVAEGLSVNLFASEADGLTSPLNLRWDSRGRMYVTVTTTYPHIFPGDIPNDKIIMLEDTDNDGVADQSTVFAEGLNIPTGIEIGNGGIYVGQNTEXXXXXXXXXXXXXXXXXXLYGGFGNGDSHQTINSFIWSPGGELYFGHGDGCESRVETPWGVSGLFNAGYYHMRPRRGQLIPFLEGHMSAGNPWGAA 543
[Close]
BLAST of mRNA_M-pyrifera_M_contig103660.783.1 vs. uniprot
Match: A0A2D7B4C8_9BACT (Cytochrome c domain-containing protein n=11 Tax=Verrucomicrobiales TaxID=48461 RepID=A0A2D7B4C8_9BACT)

HSP 1 Score: 330 bits (846), Expect = 5.830e-102
Identity = 152/215 (70.70%), Postives = 174/215 (80.93%), Query Frame = 1 
Query:    1 GDHRPRPEVLHGDSSANIKQELASFSTSHGLKVNLFASEQDGLTSPLNLRWDPEGRMYVTVTTTYPHVFPGDVPNDKIIVLEDTDHDGRADRSHVFAEGLNIPTGIELGDGGVYVGQNTELLFLXXXXXXXXXDERRVVLGGFGNGDSHQTINSFVWTPGGELFFGHGDGCESRVETPWGISRLFNAGYFRFRPRRLHLVPCMEGEMAAGNPWGV 645
            G +RP  E+LHGD  ANI++ELA+F+   G  VNLFASEQ GLTSPLN+RWDP GRMYVT TTTYPHVFPGD+PNDKIIVLED D +G AD S VFA+GLNIPTGIE G GG+YVGQNTE+LFL         D+RRV+L GFG+GDSHQTINSF+W+P G+L+FGHGDGCESRVETPWG S LFNAGYF+ RP RL LVP +E  M  GNPWG+
Sbjct:  324 GPNRPPKEILHGDPQANIEKELAAFTLPEGFSVNLFASEQQGLTSPLNVRWDPSGRMYVTTTTTYPHVFPGDLPNDKIIVLEDKDRNGVADTSTVFADGLNIPTGIEWGHGGIYVGQNTEILFLKDTDGDGQADQRRVLLSGFGDGDSHQTINSFIWSPDGQLYFGHGDGCESRVETPWGTSALFNAGYFKLRPLRLQLVPFLEAHMGPGNPWGI 538
[Close]
BLAST of mRNA_M-pyrifera_M_contig103660.783.1 vs. uniprot
Match: A0A2E7D648_9PLAN (Cytochrome c domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D648_9PLAN)

HSP 1 Score: 330 bits (846), Expect = 6.340e-102
Identity = 160/216 (74.07%), Postives = 181/216 (83.80%), Query Frame = 1 
Query:    1 GDHRPRPEVLHGDSSANIKQELASFSTSHGLKVNLFASEQDGLTSPLNLRWDPEGRMYVTVTTTYPHVFPGDVPNDKIIVLEDTDHDGRADRSHVFAEGLNIPTGIELGDGGVYVGQNTELLFLXXXXXXXXXDERRVVLGGFGNGDSHQTINSFVWTPGGELFFGHGDGCESRVETPWGISRLFNAGYFRFRPRRLHLVPCMEGEMAAGNPWGVA 648
            GDHRP PE LHG   A+I+ ELASFS   G +VNLFASE++GL SPLN+RWDP GRMY TVTTTYPHVFPGDVPNDK+I LEDT++DGRAD+S VF +GLNIPTGIE G+GGV++GQNTE+   XXXXXXXXX   RV+ GGFGNGDSHQTINSF W PGG+L+FGHGDGCESRVETPWG S LFNAGY+R RPRR  L+P +EG M  GNPWGVA
Sbjct:  336 GDHRPEPEKLHGAPEADIQDELASFSVPDGFQVNLFASEREGLNSPLNIRWDPAGRMYATVTTTYPHVFPGDVPNDKVISLEDTNNDGRADKSTVFVDGLNIPTGIEWGEGGVFIGQNTEIXXXXXXXXXXXXXXXRVLYGGFGNGDSHQTINSFAWGPGGQLYFGHGDGCESRVETPWGASNLFNAGYYRLRPRRQQLIPFLEGHMGPGNPWGVA 551
[Close]
BLAST of mRNA_M-pyrifera_M_contig103660.783.1 vs. uniprot
Match: A0A2E8FJE8_9PLAN (Cytochrome c domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8FJE8_9PLAN)

HSP 1 Score: 330 bits (845), Expect = 6.720e-102
Identity = 163/216 (75.46%), Postives = 183/216 (84.72%), Query Frame = 1 
Query:    1 GDHRPRPEVLHGDSSANIKQELASFSTSHGLKVNLFASEQDGLTSPLNLRWDPEGRMYVTVTTTYPHVFPGDVPNDKIIVLEDTDHDGRADRSHVFAEGLNIPTGIELGDGGVYVGQNTELLFLXXXXXXXXXDERRVVLGGFGNGDSHQTINSFVWTPGGELFFGHGDGCESRVETPWGISRLFNAGYFRFRPRRLHLVPCMEGEMAAGNPWGVA 648
            G +RP+PEVLH    A+IK ELASFS S GL++NLFASE+ GLTSP+ LRWDP G MYV VTTTYPHVFPGD+PNDKII LEDTD DG AD++ VFAEGLNIPTG+E GDGG+YVGQNTELL  XXXXXXXXX  RRVVLGGFGNGDSHQT+NSF+W+PGGEL+FG GDGCESRVETPWG S LF AG++RFRPRRL L P ++  M  GNPWGVA
Sbjct:  309 GSNRPKPEVLHAAPQADIKAELASFSVSKGLQINLFASEKQGLTSPIALRWDPSGHMYVAVTTTYPHVFPGDLPNDKIIRLEDTDRDGVADKAIVFAEGLNIPTGLEWGDGGIYVGQNTELLXXXXXXXXXXXXXRRVVLGGFGNGDSHQTVNSFIWSPGGELYFGQGDGCESRVETPWGTSNLFQAGFYRFRPRRLQLQPLLDDMMGPGNPWGVA 524
[Close]
BLAST of mRNA_M-pyrifera_M_contig103660.783.1 vs. uniprot
Match: A0A2E0S8Z5_9BACT (Cytochrome c domain-containing protein n=1 Tax=Rhodopirellula sp. TaxID=2024855 RepID=A0A2E0S8Z5_9BACT)

HSP 1 Score: 329 bits (844), Expect = 8.950e-102
Identity = 153/216 (70.83%), Postives = 175/216 (81.02%), Query Frame = 1 
Query:    1 GDHRPRPEVLHGDSSANIKQELASFSTSHGLKVNLFASEQDGLTSPLNLRWDPEGRMYVTVTTTYPHVFPGDVPNDKIIVLEDTDHDGRADRSHVFAEGLNIPTGIELGDGGVYVGQNTELLFLXXXXXXXXXDERRVVLGGFGNGDSHQTINSFVWTPGGELFFGHGDGCESRVETPWGISRLFNAGYFRFRPRRLHLVPCMEGEMAAGNPWGVA 648
            G++RP PE L+GD  A+I+ EL SF    G +VNLFASE+ GLTSPLNLRWDP GRMYVTVTTTYPHV+PGD+PNDK+IVLED D DGRAD+S VFAEGLNIPTGIE GDGGVY+GQNTE+LFL         D +RV+LGGFGNGDSHQTINSFVW+P GEL+FG GDGCESRVETPWG S L+ AG++R RPRR  L P ++  M  GNPWGVA
Sbjct:  306 GNNRPTPEKLYGDPKADIQAELESFVVPDGFEVNLFASEEQGLTSPLNLRWDPSGRMYVTVTTTYPHVYPGDIPNDKVIVLEDLDQDGRADKSTVFAEGLNIPTGIEWGDGGVYIGQNTEMLFLRDEDGDLQADSKRVLLGGFGNGDSHQTINSFVWSPDGELYFGQGDGCESRVETPWGNSELYQAGFYRLRPRRQQLDPLLDDFMGPGNPWGVA 521
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103660.783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E1KTP3_9PLAN5.510e-10879.17Cytochrome c domain-containing protein n=1 Tax=Pla... [more]
A0A351G086_9PLAN7.410e-10677.31Cytochrome c domain-containing protein n=2 Tax=Pla... [more]
A0A2E7L4Y5_9PLAN2.870e-10476.85Cytochrome c domain-containing protein n=1 Tax=Pla... [more]
A0A3D2V557_9PLAN5.020e-10372.69Cytochrome c domain-containing protein n=5 Tax=Pla... [more]
A0A2E6NPJ6_9BACT1.020e-10274.54Cytochrome C (Fragment) n=1 Tax=Planctomycetes bac... [more]
A0A3B9D173_9PLAN4.090e-10274.07Cytochrome c domain-containing protein n=1 Tax=Pla... [more]
A0A2D7B4C8_9BACT5.830e-10270.70Cytochrome c domain-containing protein n=11 Tax=Ve... [more]
A0A2E7D648_9PLAN6.340e-10274.07Cytochrome c domain-containing protein n=1 Tax=Pla... [more]
A0A2E8FJE8_9PLAN6.720e-10275.46Cytochrome c domain-containing protein n=1 Tax=Pla... [more]
A0A2E0S8Z5_9BACT8.950e-10270.83Cytochrome c domain-containing protein n=1 Tax=Rho... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103660contigM-pyrifera_M_contig103660:2..649 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score190.3
Seed ortholog evalue9.6e-46
Seed eggNOG ortholog344747.PM8797T_14529
Hectar predicted targeting categoryother localisation
EggNOG free text desc.pyrroloquinoline quinone binding
EggNOG OGs2J1RZ@203682,COG2010@1,COG2010@2,COG2133@1,COG2133@2,COG3828@1,COG3828@2
COG Functional cat.C
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size648
Cds size648
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815542.7874875-CDS-M-pyrifera_M_contig103660:1..6491622815542.7874875-CDS-M-pyrifera_M_contig103660:1..649Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103660 2..649 +
1692277456.430992-CDS-M-pyrifera_M_contig103660:1..6491692277456.430992-CDS-M-pyrifera_M_contig103660:1..649Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103660 2..649 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103660.783.1prot_M-pyrifera_M_contig103660.783.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103660 2..649 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103660.783.1

>prot_M-pyrifera_M_contig103660.783.1 ID=prot_M-pyrifera_M_contig103660.783.1|Name=mRNA_M-pyrifera_M_contig103660.783.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp
GDHRPRPEVLHGDSSANIKQELASFSTSHGLKVNLFASEQDGLTSPLNLR
WDPEGRMYVTVTTTYPHVFPGDVPNDKIIVLEDTDHDGRADRSHVFAEGL
NIPTGIELGDGGVYVGQNTELLFLKDTDGDLKADERRVVLGGFGNGDSHQ
TINSFVWTPGGELFFGHGDGCESRVETPWGISRLFNAGYFRFRPRRLHLV
PCMEGEMAAGNPWGVA
back to top

mRNA from alignment at M-pyrifera_M_contig103660:2..649+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103660.783.1 ID=mRNA_M-pyrifera_M_contig103660.783.1|Name=mRNA_M-pyrifera_M_contig103660.783.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig103660:2..649+ (Macrocystis pyrifera P11B4 male)
GGGGATCATCGTCCGCGACCGGAAGTCCTCCACGGAGATTCTTCAGCCAA
CATCAAGCAGGAATTGGCGTCGTTCAGCACTTCGCACGGGCTCAAGGTCA
ATCTCTTCGCCTCGGAGCAGGATGGTCTGACGTCGCCGCTCAACTTGCGC
TGGGATCCGGAAGGACGGATGTACGTGACAGTGACGACGACATACCCTCA
TGTCTTTCCGGGCGATGTCCCGAATGACAAGATCATCGTGTTGGAAGATA
CCGATCACGATGGAAGAGCGGACCGGTCACACGTCTTCGCGGAAGGACTC
AACATTCCAACAGGCATCGAACTCGGCGACGGCGGCGTCTATGTGGGACA
GAACACCGAGTTGCTCTTCCTCAAAGATACGGATGGCGATCTCAAGGCTG
ACGAGCGTCGCGTCGTGTTGGGCGGGTTCGGCAACGGTGATTCTCACCAG
ACGATTAACTCGTTTGTGTGGACTCCCGGGGGAGAGTTGTTCTTTGGTCA
TGGTGACGGGTGCGAGTCGCGTGTCGAAACCCCTTGGGGAATCAGTCGCC
TGTTCAACGCGGGCTACTTCCGTTTTCGTCCACGACGACTTCATCTGGTG
CCCTGCATGGAAGGGGAGATGGCCGCTGGCAACCCGTGGGGTGTCGCT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig103660:2..649+

>mRNA_M-pyrifera_M_contig103660.783.1 ID=mRNA_M-pyrifera_M_contig103660.783.1|Name=mRNA_M-pyrifera_M_contig103660.783.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig103660:2..649+ (Macrocystis pyrifera P11B4 male)
GGGGATCATCGTCCGCGACCGGAAGTCCTCCACGGAGATTCTTCAGCCAA
CATCAAGCAGGAATTGGCGTCGTTCAGCACTTCGCACGGGCTCAAGGTCA
ATCTCTTCGCCTCGGAGCAGGATGGTCTGACGTCGCCGCTCAACTTGCGC
TGGGATCCGGAAGGACGGATGTACGTGACAGTGACGACGACATACCCTCA
TGTCTTTCCGGGCGATGTCCCGAATGACAAGATCATCGTGTTGGAAGATA
CCGATCACGATGGAAGAGCGGACCGGTCACACGTCTTCGCGGAAGGACTC
AACATTCCAACAGGCATCGAACTCGGCGACGGCGGCGTCTATGTGGGACA
GAACACCGAGTTGCTCTTCCTCAAAGATACGGATGGCGATCTCAAGGCTG
ACGAGCGTCGCGTCGTGTTGGGCGGGTTCGGCAACGGTGATTCTCACCAG
ACGATTAACTCGTTTGTGTGGACTCCCGGGGGAGAGTTGTTCTTTGGTCA
TGGTGACGGGTGCGAGTCGCGTGTCGAAACCCCTTGGGGAATCAGTCGCC
TGTTCAACGCGGGCTACTTCCGTTTTCGTCCACGACGACTTCATCTGGTG
CCCTGCATGGAAGGGGAGATGGCCGCTGGCAACCCGTGGGGTGTCGCTGG
GGATCATCGTCCGCGACCGGAAGTCCTCCACGGAGATTCTTCAGCCAACA
TCAAGCAGGAATTGGCGTCGTTCAGCACTTCGCACGGGCTCAAGGTCAAT
CTCTTCGCCTCGGAGCAGGATGGTCTGACGTCGCCGCTCAACTTGCGCTG
GGATCCGGAAGGACGGATGTACGTGACAGTGACGACGACATACCCTCATG
TCTTTCCGGGCGATGTCCCGAATGACAAGATCATCGTGTTGGAAGATACC
GATCACGATGGAAGAGCGGACCGGTCACACGTCTTCGCGGAAGGACTCAA
CATTCCAACAGGCATCGAACTCGGCGACGGCGGCGTCTATGTGGGACAGA
ACACCGAGTTGCTCTTCCTCAAAGATACGGATGGCGATCTCAAGGCTGAC
GAGCGTCGCGTCGTGTTGGGCGGGTTCGGCAACGGTGATTCTCACCAGAC
GATTAACTCGTTTGTGTGGACTCCCGGGGGAGAGTTGTTCTTTGGTCATG
GTGACGGGTGCGAGTCGCGTGTCGAAACCCCTTGGGGAATCAGTCGCCTG
TTCAACGCGGGCTACTTCCGTTTTCGTCCACGACGACTTCATCTGGTGCC
CTGCATGGAAGGGGAGATGGCCGCTGGCAACCCGTGGGGTGTCGCT
back to top