mRNA_M-pyrifera_M_contig103643.780.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103643.780.1
Unique NamemRNA_M-pyrifera_M_contig103643.780.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig103643.780.1 vs. uniprot
Match: A0A5A8C4I7_CAFRO (cGMP-dependent protein kinase n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C4I7_CAFRO)

HSP 1 Score: 199 bits (505), Expect = 9.620e-56
Identity = 102/199 (51.26%), Postives = 134/199 (67.34%), Query Frame = 1
Query:   40 KPVVAKTAEERSLIGAALRANVLFASLGDTTRRDLIDAMEPLEVEPGEVLIRQGDEGDFFYVIHFGQFEIELDGRKVATFGDDSPNKSFGELALLYNSPRAATVRAATKGRLFRIDRTVFRNVMAAGSRSQHEHMLRQIRRGVFSGLSDERAHAAASAATLVRFHGGDQIVRKGDVGEVFYLIESGHVFCRNLDGNQVD 636
            KPV  K+ + R +I AAL+ NVL +SLG    RDL++A +P +V+ G  LI QGD GD FYVI  G+F+I ++G KVATFGD +PNKSFGELALL+NSPRAA+V A T  R++ + R  FR ++A  S  +H  +   + RG+ SGL  E+    A AAT VRF+ GDQ++RKG  G VFY+I  G V C N+ G Q D
Sbjct:    9 KPVFEKSPDVRKVISAALKENVLTSSLGPDVIRDLVNATQPRDVDTGTELITQGDVGDNFYVIESGKFDILVNGAKVATFGDGTPNKSFGELALLFNSPRAASVVATTPARVWWLGRDTFRGLVATSSHEEHGRVKAALARGILSGLDTEQIERVAGAATRVRFNDGDQVIRKGAEGSVFYVILEGEVLCTNIGGGQSD 207          
BLAST of mRNA_M-pyrifera_M_contig103643.780.1 vs. uniprot
Match: A0A8H7SRC9_9FUNG (Ubiquitinyl hydrolase 1 n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SRC9_9FUNG)

HSP 1 Score: 149 bits (377), Expect = 1.430e-38
Identity = 84/205 (40.98%), Postives = 123/205 (60.00%), Query Frame = 1
Query:   31 DFVKPVVAKTAEERSLIGAALRANVLFASLGDTTRRDLIDAMEPLEVEPGEVLIRQGDEGDFFYVIHFGQFEIELDGRKVATFGDDSPNKSFGELALLYNSPRAATVRAATKGRLFRIDRTVFRNVM---AAGSRSQHEHMLRQIRRGVFSGLSDERAHAAASAATLVRFHGGDQIVRKGDVGEVFYLIESGHVFCRNL--DGNQ 630
            DFVK V  K++ +R  I  A+ +N LF +L D    D++DAM   E++ G+ +I QG  GD+FY++  GQ +  +D +KV ++G   P  SFGELAL+YN+PRAA++ A T GRL+ +DR  FR+++    A  R  +E  L +I   +F  L     H  A A   V+F   D ++++GDVG+ FYLIESG      L  DG+Q
Sbjct:  114 DFVKVVNPKSSLQRDNIRLAIESNFLFKNLDDEQYSDVVDAMVQKEIKAGDHVINQGAVGDYFYIVESGQLDCFIDSKKVTSYG---PGGSFGELALMYNAPRAASIVAVTDGRLYALDRVTFRSILMENTARKRRMYERFLEEI--PLFKSLETYERHKIADALEPVQFDDNDVVIKEGDVGDNFYLIESGEAKFYKLLPDGSQ 313          
BLAST of mRNA_M-pyrifera_M_contig103643.780.1 vs. uniprot
Match: A0A7S2UGM3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGM3_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.330e-37
Identity = 82/200 (41.00%), Postives = 114/200 (57.00%), Query Frame = 1
Query:   22 LRDDFVKPVVAKTAEERSLIGAALRANVLFASLGDTTRRDLIDAMEPLEVEPGEVLIRQGDEGDFFYVIHFGQFEIELDGRKVATFGDDSPNKSFGELALLYNSPRAATVRAATKGRLFRIDRTVFRNVMAAGSRSQHEHMLRQIRRGVF-SGLSDERAHAAASAATLVRFHGGDQIVRKGDVGEVFYLIESGHVFCRNL 618
            + D FV P   KTA     I ++L  N +FASL    RR LIDAM    V PG V+I+QGD GDFFYV+  G     +DG  V   G  +   SFGELALLYN PRAAT  A +   L+++D+  FR+++A  + +Q + +   +R+  F S L        + A T V F  G++++ KGDVGEVFY++  G V   ++
Sbjct:   99 VNDGFVTPSYPKTAAAIEFIDSSLADNFIFASLSSKERRLLIDAMSEQSVPPGTVIIQQGDIGDFFYVVESGHVSFTVDGNHV---GACTRGASFGELALLYNCPRAATCLANSNCHLWKVDQRTFRHMLANNTANQQKDIQDVLRKVPFLSELESATLSKISDALTTVTFPKGERVINKGDVGEVFYILREGDVKVHDI 295          
BLAST of mRNA_M-pyrifera_M_contig103643.780.1 vs. uniprot
Match: A0A7S2UGG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGG3_9STRA)

HSP 1 Score: 140 bits (354), Expect = 7.110e-37
Identity = 82/200 (41.00%), Postives = 114/200 (57.00%), Query Frame = 1
Query:   22 LRDDFVKPVVAKTAEERSLIGAALRANVLFASLGDTTRRDLIDAMEPLEVEPGEVLIRQGDEGDFFYVIHFGQFEIELDGRKVATFGDDSPNKSFGELALLYNSPRAATVRAATKGRLFRIDRTVFRNVMAAGSRSQHEHMLRQIRRGVF-SGLSDERAHAAASAATLVRFHGGDQIVRKGDVGEVFYLIESGHVFCRNL 618
            + D FV P   KTA     I ++L  N +FASL    RR LIDAM    V PG V+I+QGD GDFFYV+  G     +DG  V   G  +   SFGELALLYN PRAAT  A +   L+++D+  FR+++A  + +Q + +   +R+  F S L        + A T V F  G++++ KGDVGEVFY++  G V   ++
Sbjct:  149 VNDGFVTPSYPKTAAAIEFIDSSLADNFIFASLSSKERRLLIDAMSEQSVPPGTVIIQQGDIGDFFYVVESGHVSFTVDGNHV---GACTRGASFGELALLYNCPRAATCLANSNCHLWKVDQRTFRHMLANNTANQQKDIQDVLRKVPFLSELESATLSKISDALTTVTFPKGERVINKGDVGEVFYILREGDVKVHDI 345          
BLAST of mRNA_M-pyrifera_M_contig103643.780.1 vs. uniprot
Match: A0A507CXG3_9FUNG (cAMP-dependent protein kinase regulatory subunit n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CXG3_9FUNG)

HSP 1 Score: 140 bits (354), Expect = 2.070e-36
Identity = 83/211 (39.34%), Postives = 119/211 (56.40%), Query Frame = 1
Query:   28 DDFVKPVVAKTAEERSLIGAALRANVLFASLGDTTRRDLIDAMEPLEVEPGEVLIRQGDEGDFFYVIHFGQFEIELDG-----RKVATFGDDSPNKSFGELALLYNSPRAATVRAATKGRLFRIDRTVFRNVMAAGS---RSQHEHMLRQIRRGVFSGLSDERAHAAASAATLVRFHGGDQIVRKGDVGEVFYLIESGHVFCRNLDGNQVD 636
            D++VK V+ KT ++RS I AA++ N LF  L +    D+IDAM    V  GE +IRQG  GDFFYV   G  ++ +       +KV  +G   P  SFGELAL+YN+PRAAT+ A +   L+ +DR  FR ++   +   R  +EH L ++   +   L     H  A A   V F  G+ ++++GDVGE FY+IE+G      +D N VD
Sbjct:  128 DEWVKVVIPKTVDQRSRIEAAIQHNFLFRHLDEDQYTDVIDAMAEKRVPAGEEVIRQGAVGDFFYVAEVGTLDVFVSKSGAPEQKVYQYG---PGGSFGELALMYNAPRAATIIATSDCILWALDRVTFRRILMENTSRKRRMYEHFLEEV--PILVSLESYERHKIADALESVVFQDGEVVLKQGDVGENFYIIEAGEAVVTKMDENGVD 333          
BLAST of mRNA_M-pyrifera_M_contig103643.780.1 vs. uniprot
Match: B8BWJ4_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWJ4_THAPS)

HSP 1 Score: 138 bits (347), Expect = 2.320e-36
Identity = 85/209 (40.67%), Postives = 118/209 (56.46%), Query Frame = 1
Query:   22 LRDDFVKPVVAKTAEERSLIGAALRANVLFASLGDTTRRDLIDAMEPLEVEPGEVLIRQGDEGDFFYVIHFGQFEIELDGRKVATFGDDSPNKSFGELALLYNSPRAATVRAATKGRLFRIDRTVFRNVMAAGSRSQHEHMLRQIRRGVF-SGLSDERAHAAASAATLVRFHGGDQIVRKGDVGEVFYLIESGHVFCRNL---DGNQVD 636
            + +DFV P   K+      I  +L  N +FASL    RR LIDAM+   V  G ++I QGD GD+FYV+  GQ    +DG  V   G  +   SFGELALLYN PRAAT  A T  RL+++D+  FR ++A  + SQ +  +  +R+  F + L +      A A T V F  G++I+ KGDVGEVFY+++ G V   ++   D   VD
Sbjct:   34 MSEDFVIPNFPKSDAAVQFIDDSLADNFIFASLTKEERRLLIDAMKADTVPAGTIIIAQGDIGDYFYVVEDGQISFAVDGNHV---GACTRGASFGELALLYNCPRAATCIANTNCRLWKVDQRTFRYMLANNNASQQKDTIDVLRKVQFLADLDESMLIKIADALTTVSFQAGERIINKGDVGEVFYILKEGRVRVHDIGFGDSQYVD 239          
BLAST of mRNA_M-pyrifera_M_contig103643.780.1 vs. uniprot
Match: A0A167JYB0_PHYB8 (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167JYB0_PHYB8)

HSP 1 Score: 139 bits (350), Expect = 4.650e-36
Identity = 78/215 (36.28%), Postives = 126/215 (58.60%), Query Frame = 1
Query:    1 ILPSNDVLRDDFVKPVVAKTAEERSLIGAALRANVLFASLGDTTRRDLIDAMEPLEVEPGEVLIRQGDEGDFFYVIHFGQFEIELDGRKVATFGDDSPNKSFGELALLYNSPRAATVRAATKGRLFRIDRTVFRNVMA---AGSRSQHEHMLRQIRRGVFSGLSDERAHAAASAATLVRFHGGDQIVRKGDVGEVFYLIESGHV--FCRNLDGNQ 630
            I PS   L+    K V+ K AE+R  I AA++ N LF ++ D    D+++AM   +V+ G+++I+QG  GD+FY++  G F+  ++  KV ++G   P  SFGELAL+YN+PRAAT+ A + G L+ +DR  FR+++    A  R  +EH L ++   +F  L+    H  A A   +++   D ++ +GD G+ FYLIE G    + +  DG +
Sbjct:  105 IQPSQTPLK----KIVIPKDAEQRKQIRAAIQNNFLFKNMDDDQYNDIVNAMAERKVDEGQIVIKQGGVGDYFYIVQSGTFDCLINDHKVTSYG---PGGSFGELALMYNAPRAATIIATSDGVLWALDRVTFRSLVVENTAKKRMMYEHFLEEV--PLFKSLNKIERHKIADALESIQYEDKDVVLNQGDYGDNFYLIEDGEATFYKKGKDGKE 310          
BLAST of mRNA_M-pyrifera_M_contig103643.780.1 vs. uniprot
Match: A0A7S0FGR0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FGR0_9STRA)

HSP 1 Score: 137 bits (344), Expect = 5.900e-36
Identity = 83/198 (41.92%), Postives = 114/198 (57.58%), Query Frame = 1
Query:   28 DDFVKPVVAKTAEERSLIGAALRANVLFASLGDTTRRDLIDAMEPLEVEPGEVLIRQGDEGDFFYVIHFGQFEIELDGRKVATFGDDSPNKSFGELALLYNSPRAATVRAATKGRLFRIDRTVFRNVMAAGSRSQHEHMLRQIRRGVF-SGLSDERAHAAASAATLVRFHGGDQIVRKGDVGEVFYLIESGHVFCRNL 618
            ++FV PV AK+      I  +L  N +FASL    RR LIDAM    V  G V+I+QGD GDFFYV+  G     +DG  V   G  +   SFGELALLYN PRAAT  A T  RL+++D+  FR ++A    +  + +   +R+  F S L D+     + A T V F  G++I+ KGDVGEVFY++  G+V   ++
Sbjct:   86 EEFVAPVYAKSDAAIQFIDNSLADNFIFASLTPEERRQLIDAMIMDTVAAGTVIIQQGDIGDFFYVVEEGHVSFSVDGNHV---GACTRGASFGELALLYNCPRAATCLANTDCRLWKVDQKTFRYMLANNQANTQKDIHDVLRKVPFLSELEDQMLTRISDALTTVTFPTGERIINKGDVGEVFYILREGNVKVHDI 280          
BLAST of mRNA_M-pyrifera_M_contig103643.780.1 vs. uniprot
Match: A0A2G4T4V4_RHIZD (cAMP-dependent protein kinase regulatory subunit n=5 Tax=Rhizopus TaxID=4842 RepID=A0A2G4T4V4_RHIZD)

HSP 1 Score: 139 bits (350), Expect = 6.760e-36
Identity = 77/202 (38.12%), Postives = 124/202 (61.39%), Query Frame = 1
Query:   40 KPVVAKTAEERSLIGAALRANVLFASLGDTTRRDLIDAMEPLEVEPGEVLIRQGDEGDFFYVIHFGQFEIELDGRKVATFGDDSPNKSFGELALLYNSPRAATVRAATKGRLFRIDRTVFRNVMAAGS---RSQHEHMLRQIRRGVFSGLSDERAHAAASAATLVRFHGGDQIVRKGDVGEVFYLIESGH-VFCRNL-DGNQ 630
            K V+ K+ ++R+ I  A+  N LF  L D   +D+++AM   +V+ GE +I QG  GD+FY++  GQ +  +DG+KV ++G   P+ SFGELAL+YN+PRAA++ A T   L+ +DR  FR+++   +   R+ +E  L ++   +F  L     H  A A   V F   + ++++GD+GE FYLIESG  +F + + DG+Q
Sbjct:  129 KIVIPKSDDQRAKIRTAISTNFLFKHLDDEQYQDVVNAMTEKKVKQGEHVIEQGAVGDYFYIVESGQLDCFIDGKKVTSYG---PSGSFGELALMYNAPRAASIIAVTDCVLYALDRITFRSILMENTSRKRTMYERFLSEV--PIFKSLEVYERHKIADALESVTFEDKEVVIKEGDIGEEFYLIESGEAIFYKTMPDGSQ 325          
BLAST of mRNA_M-pyrifera_M_contig103643.780.1 vs. uniprot
Match: A0A0J7MWL0_LASNI (Camp-dependent protein kinase type i regulatory subunit (Fragment) n=2 Tax=Formicidae TaxID=36668 RepID=A0A0J7MWL0_LASNI)

HSP 1 Score: 135 bits (341), Expect = 9.680e-36
Identity = 80/191 (41.88%), Postives = 109/191 (57.07%), Query Frame = 1
Query:   34 FVKPVVAKTAEERSLIGAALRANVLFASLGDTTRRDLIDAMEPLEVEPGEVLIRQGDEGDFFYVIHFGQFEIELDGRKVATFGDDSPNKSFGELALLYNSPRAATVRAATKGRLFRIDRTVFRNVMAAGS---RSQHEHMLRQIRRGVFSGLSDERAHAAASAATLVRFHGGDQIVRKGDVGEVFYLIESG 597
            +VK VV K  +  + +  A+  NVLFA L +  R D+ DAM P+   PGE +IRQGDEGD FYVI  G+ EI ++G    T G+     SFGELAL+Y +PRAATVRA T  +L+ IDR  +R ++   +   R  +E  L ++   +   L        A A   V F  G+ IVR+G+ GE FY+I  G
Sbjct:   49 YVKKVVPKDYKTMAALSKAIAKNVLFAHLDENERSDIFDAMFPVTFLPGEAIIRQGDEGDNFYVIDQGEVEIFVNGELATTIGEGG---SFGELALIYGTPRAATVRAKTDVKLWGIDRDSYRRILMGSTIRKRKMYEEFLSRV--SILESLDKWERLTVADALEPVAFDDGETIVRQGEPGEDFYIIVEG 234          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103643.780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8C4I7_CAFRO9.620e-5651.26cGMP-dependent protein kinase n=4 Tax=Cafeteria ro... [more]
A0A8H7SRC9_9FUNG1.430e-3840.98Ubiquitinyl hydrolase 1 n=1 Tax=Thamnidium elegans... [more]
A0A7S2UGM3_9STRA2.330e-3741.00Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S2UGG3_9STRA7.110e-3741.00Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A507CXG3_9FUNG2.070e-3639.34cAMP-dependent protein kinase regulatory subunit n... [more]
B8BWJ4_THAPS2.320e-3640.67Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A167JYB0_PHYB84.650e-3636.28cAMP-dependent protein kinase regulatory subunit n... [more]
A0A7S0FGR0_9STRA5.900e-3641.92Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A2G4T4V4_RHIZD6.760e-3638.12cAMP-dependent protein kinase regulatory subunit n... [more]
A0A0J7MWL0_LASNI9.680e-3641.88Camp-dependent protein kinase type i regulatory su... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103643contigM-pyrifera_M_contig103643:2..637 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score137.9
Seed ortholog evalue5.5e-30
Seed eggNOG ortholog109760.SPPG_06747T1
Preferred namePKAR
KEGG koko:K04739
KEGG Pathwayko04910,map04910
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000785,GO:0000790,GO:0001932,GO:0001933,GO:0002831,GO:0002832,GO:0003674,GO:0004857,GO:0004860,GO:0004862,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005886,GO:0006469,GO:0006950,GO:0006979,GO:0007154,GO:0008104,GO:0008150,GO:0008603,GO:0009266,GO:0009267,GO:0009405,GO:0009408,GO:0009605,GO:0009607,GO:0009628,GO:0009653,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010563,GO:0010570,GO:0010605,GO:0010639,GO:0010646,GO:0010648,GO:0016020,GO:0019207,GO:0019210,GO:0019220,GO:0019222,GO:0019887,GO:0019954,GO:0022603,GO:0023051,GO:0023057,GO:0030154,GO:0030234,GO:0030291,GO:0030435,GO:0030436,GO:0030447,GO:0030448,GO:0031279,GO:0031281,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032268,GO:0032269,GO:0032502,GO:0033036,GO:0033043,GO:0033554,GO:0033673,GO:0034305,GO:0034599,GO:0034605,GO:0034613,GO:0036170,GO:0036180,GO:0040007,GO:0040008,GO:0042173,GO:0042221,GO:0042325,GO:0042326,GO:0042594,GO:0043085,GO:0043086,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043549,GO:0043934,GO:0043936,GO:0043937,GO:0043938,GO:0043943,GO:0043945,GO:0044092,GO:0044093,GO:0044182,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045595,GO:0045597,GO:0045761,GO:0045762,GO:0045859,GO:0045881,GO:0045926,GO:0045936,GO:0046578,GO:0046580,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051056,GO:0051058,GO:0051094,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051246,GO:0051248,GO:0051338,GO:0051339,GO:0051348,GO:0051349,GO:0051641,GO:0051704,GO:0051716,GO:0051783,GO:0051784,GO:0060255,GO:0060258,GO:0065007,GO:0065009,GO:0070013,GO:0070727,GO:0070887,GO:0071496,GO:0071900,GO:0071901,GO:0071944,GO:0080090,GO:0080134,GO:0097271,GO:0098772,GO:1900428,GO:1900429,GO:1900434,GO:1900435,GO:1900443,GO:1900444,GO:1902531,GO:1902532,GO:1903664,GO:1903666
EggNOG free text desc.cAMP-dependent protein kinase regulatory subunit
EggNOG OGs38GS1@33154,3NU9Z@4751,COG0664@1,KOG1113@2759
COG Functional cat.T
Best tax levelFungi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons1
Model size636
Cds size636
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815542.6923008-CDS-M-pyrifera_M_contig103643:1..6371622815542.6923008-CDS-M-pyrifera_M_contig103643:1..637Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103643 2..637 -
1692277456.391916-CDS-M-pyrifera_M_contig103643:1..6371692277456.391916-CDS-M-pyrifera_M_contig103643:1..637Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103643 2..637 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103643.780.1prot_M-pyrifera_M_contig103643.780.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103643 2..637 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103643.780.1

>prot_M-pyrifera_M_contig103643.780.1 ID=prot_M-pyrifera_M_contig103643.780.1|Name=mRNA_M-pyrifera_M_contig103643.780.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=212bp
ILPSNDVLRDDFVKPVVAKTAEERSLIGAALRANVLFASLGDTTRRDLID
AMEPLEVEPGEVLIRQGDEGDFFYVIHFGQFEIELDGRKVATFGDDSPNK
SFGELALLYNSPRAATVRAATKGRLFRIDRTVFRNVMAAGSRSQHEHMLR
QIRRGVFSGLSDERAHAAASAATLVRFHGGDQIVRKGDVGEVFYLIESGH
VFCRNLDGNQVD
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mRNA from alignment at M-pyrifera_M_contig103643:2..637-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103643.780.1 ID=mRNA_M-pyrifera_M_contig103643.780.1|Name=mRNA_M-pyrifera_M_contig103643.780.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig103643:2..637- (Macrocystis pyrifera P11B4 male)
ATTTTGCCGTCGAATGACGTGCTTCGAGACGATTTCGTGAAACCCGTGGT GGCGAAAACGGCCGAGGAGCGCAGTCTGATCGGAGCGGCGCTGCGAGCGA ACGTGCTCTTCGCCTCGTTGGGCGATACGACGCGGCGAGACCTGATCGAC GCCATGGAGCCGCTGGAAGTGGAGCCCGGCGAAGTGTTGATCCGCCAGGG CGACGAGGGCGATTTCTTCTACGTGATCCACTTCGGGCAGTTTGAGATCG AGCTGGACGGCCGCAAGGTGGCCACGTTTGGAGACGACAGCCCCAACAAG AGCTTTGGGGAGCTGGCGCTGCTGTACAACTCCCCGCGGGCCGCGACCGT GCGCGCCGCCACCAAAGGCCGCTTATTCCGCATCGACCGCACCGTATTCC GCAACGTGATGGCCGCAGGTTCCAGGTCCCAGCACGAGCACATGCTGCGC CAAATCCGGAGAGGCGTGTTTTCCGGTCTGAGCGACGAGAGGGCGCATGC CGCCGCCTCAGCCGCCACGCTGGTGCGGTTCCACGGAGGAGACCAGATCG TGCGAAAGGGTGACGTGGGAGAGGTGTTCTACCTCATCGAGTCGGGCCAC GTGTTTTGCCGCAACCTCGACGGGAACCAGGTGGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig103643:2..637-

>mRNA_M-pyrifera_M_contig103643.780.1 ID=mRNA_M-pyrifera_M_contig103643.780.1|Name=mRNA_M-pyrifera_M_contig103643.780.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1272bp|location=Sequence derived from alignment at M-pyrifera_M_contig103643:2..637- (Macrocystis pyrifera P11B4 male)
ATTTTGCCGTCGAATGACGTGCTTCGAGACGATTTCGTGAAACCCGTGGT
GGCGAAAACGGCCGAGGAGCGCAGTCTGATCGGAGCGGCGCTGCGAGCGA
ACGTGCTCTTCGCCTCGTTGGGCGATACGACGCGGCGAGACCTGATCGAC
GCCATGGAGCCGCTGGAAGTGGAGCCCGGCGAAGTGTTGATCCGCCAGGG
CGACGAGGGCGATTTCTTCTACGTGATCCACTTCGGGCAGTTTGAGATCG
AGCTGGACGGCCGCAAGGTGGCCACGTTTGGAGACGACAGCCCCAACAAG
AGCTTTGGGGAGCTGGCGCTGCTGTACAACTCCCCGCGGGCCGCGACCGT
GCGCGCCGCCACCAAAGGCCGCTTATTCCGCATCGACCGCACCGTATTCC
GCAACGTGATGGCCGCAGGTTCCAGGTCCCAGCACGAGCACATGCTGCGC
CAAATCCGGAGAGGCGTGTTTTCCGGTCTGAGCGACGAGAGGGCGCATGC
CGCCGCCTCAGCCGCCACGCTGGTGCGGTTCCACGGAGGAGACCAGATCG
TGCGAAAGGGTGACGTGGGAGAGGTGTTCTACCTCATCGAGTCGGGCCAC
GTGTTTTGCCGCAACCTCGACGGGAACCAGGTGGACATTTTGCCGTCGAA
TGACGTGCTTCGAGACGATTTCGTGAAACCCGTGGTGGCGAAAACGGCCG
AGGAGCGCAGTCTGATCGGAGCGGCGCTGCGAGCGAACGTGCTCTTCGCC
TCGTTGGGCGATACGACGCGGCGAGACCTGATCGACGCCATGGAGCCGCT
GGAAGTGGAGCCCGGCGAAGTGTTGATCCGCCAGGGCGACGAGGGCGATT
TCTTCTACGTGATCCACTTCGGGCAGTTTGAGATCGAGCTGGACGGCCGC
AAGGTGGCCACGTTTGGAGACGACAGCCCCAACAAGAGCTTTGGGGAGCT
GGCGCTGCTGTACAACTCCCCGCGGGCCGCGACCGTGCGCGCCGCCACCA
AAGGCCGCTTATTCCGCATCGACCGCACCGTATTCCGCAACGTGATGGCC
GCAGGTTCCAGGTCCCAGCACGAGCACATGCTGCGCCAAATCCGGAGAGG
CGTGTTTTCCGGTCTGAGCGACGAGAGGGCGCATGCCGCCGCCTCAGCCG
CCACGCTGGTGCGGTTCCACGGAGGAGACCAGATCGTGCGAAAGGGTGAC
GTGGGAGAGGTGTTCTACCTCATCGAGTCGGGCCACGTGTTTTGCCGCAA
CCTCGACGGGAACCAGGTGGAC
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