mRNA_M-pyrifera_M_contig103390.717.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103390.717.1
Unique NamemRNA_M-pyrifera_M_contig103390.717.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig103390.717.1 vs. uniprot
Match: W7U0R3_9STRA (Peptidylprolyl isomerase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0R3_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.900e-58
Identity = 86/106 (81.13%), Postives = 93/106 (87.74%), Query Frame = 1 
Query:    1 IGVKHRVEDCERRSTKGDKLSMHYTGTLYKDGSKFDSSLDRGTPFDFTLGAGQVIKGWDRGLVNMCVGEKRRLVIPSGLGYGDRGAGAKIPGGATLAFDVELLGIN 318
            +GVK R + C+ +S KGD LSMHYTGTLYKDGSKFDSSLDR  PF+FTLG GQVIKGWD GL+NMCVGEKRRL IPS LGYGDRGAGAKIPGGATL F+VELLGIN
Sbjct:   36 VGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGIN 141
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BLAST of mRNA_M-pyrifera_M_contig103390.717.1 vs. uniprot
Match: A0A813C4T4_9DINO (Peptidylprolyl isomerase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C4T4_9DINO)

HSP 1 Score: 182 bits (461), Expect = 2.950e-57
Identity = 84/105 (80.00%), Postives = 93/105 (88.57%), Query Frame = 1 
Query:    1 IGVKHRVEDCERRSTKGDKLSMHYTGTLYKDGSKFDSSLDRGTPFDFTLGAGQVIKGWDRGLVNMCVGEKRRLVIPSGLGYGDRGAGAKIPGGATLAFDVELLGI 315
            IGVKHR E+C R+S  GD+L MHYTGTLYKDGSKFDSSLDR  PF+F LG+GQVIKGWD+GL+NMC GE+RRLVIPSGLGYGDRGAG KIPGGATL F+VELL I
Sbjct:   31 IGVKHRPEECPRKSKSGDRLRMHYTGTLYKDGSKFDSSLDRNQPFEFKLGSGQVIKGWDQGLLNMCEGEQRRLVIPSGLGYGDRGAGGKIPGGATLVFEVELLEI 135
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BLAST of mRNA_M-pyrifera_M_contig103390.717.1 vs. uniprot
Match: A0A485KT63_9STRA (Peptidylprolyl isomerase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KT63_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.320e-56
Identity = 83/106 (78.30%), Postives = 92/106 (86.79%), Query Frame = 1 
Query:    1 IGVKHRVEDCERRSTKGDKLSMHYTGTLYKDGSKFDSSLDRGTPFDFTLGAGQVIKGWDRGLVNMCVGEKRRLVIPSGLGYGDRGAGAKIPGGATLAFDVELLGIN 318
            IGVKHR E+C R+S  GDKLSMHYTGTL KDGSKFDSS+DR +PF+FTLG GQVIKGWD+GLV MC+GEKRRL IPSG+GYGDRG+  KIPGGATL FDVELL I 
Sbjct:   28 IGVKHRPEECTRKSQSGDKLSMHYTGTLRKDGSKFDSSVDRNSPFEFTLGQGQVIKGWDQGLVGMCIGEKRRLTIPSGMGYGDRGSPPKIPGGATLVFDVELLDIK 133
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BLAST of mRNA_M-pyrifera_M_contig103390.717.1 vs. uniprot
Match: A0A6G0XMF8_9STRA (Peptidylprolyl isomerase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XMF8_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.150e-55
Identity = 82/105 (78.10%), Postives = 92/105 (87.62%), Query Frame = 1 
Query:    1 IGVKHRVEDCERRSTKGDKLSMHYTGTLYKDGSKFDSSLDRGTPFDFTLGAGQVIKGWDRGLVNMCVGEKRRLVIPSGLGYGDRGAGAKIPGGATLAFDVELLGI 315
            +GVK+R E C R+S  GDKLSMHYTGTL KDGSKFDSS+DR +PF+FTLGAGQVIKGWD+GLV MC+GEKRRL IPSG+GYGDRG+  KIPGGATL FDVELL I
Sbjct:   29 VGVKYRPETCARKSESGDKLSMHYTGTLRKDGSKFDSSVDRNSPFEFTLGAGQVIKGWDQGLVGMCIGEKRRLTIPSGMGYGDRGSPPKIPGGATLVFDVELLDI 133
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BLAST of mRNA_M-pyrifera_M_contig103390.717.1 vs. uniprot
Match: W4G1S5_9STRA (Peptidylprolyl isomerase n=4 Tax=Aphanomyces TaxID=100860 RepID=W4G1S5_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.300e-54
Identity = 80/106 (75.47%), Postives = 91/106 (85.85%), Query Frame = 1 
Query:    1 IGVKHRVEDCERRSTKGDKLSMHYTGTLYKDGSKFDSSLDRGTPFDFTLGAGQVIKGWDRGLVNMCVGEKRRLVIPSGLGYGDRGAGAKIPGGATLAFDVELLGIN 318
            +GVK R E C R+S  GDKLSMHYTGTL KDGSKFDSS+DR +PF+FTLG+GQVI+GWD+GL+ MC+GEKRRL IPSGLGYGDRG+  KIPGGATL FDVELL I 
Sbjct:   28 VGVKFRPESCSRKSESGDKLSMHYTGTLRKDGSKFDSSVDRNSPFEFTLGSGQVIRGWDQGLLGMCIGEKRRLTIPSGLGYGDRGSPPKIPGGATLVFDVELLDIK 133
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BLAST of mRNA_M-pyrifera_M_contig103390.717.1 vs. uniprot
Match: A0A8K1FCQ6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCQ6_PYTOL)

HSP 1 Score: 172 bits (436), Expect = 2.530e-53
Identity = 83/106 (78.30%), Postives = 88/106 (83.02%), Query Frame = 1 
Query:    1 IGVKHRVEDCERRSTKGDKLSMHYTGTLYKDGSKFDSSLDRGTPFDFTLGAGQVIKGWDRGLVNMCVGEKRRLVIPSGLGYGDRGAGAKIPGGATLAFDVELLGIN 318
            IGVK R E CE+RS  GDKLSMHYTGTL KDGSKFDSSLDR +PF+FTLGAGQVIKGWD+GLV MC+GEKRRL IPS LGYG  GA   IPGGATL FDVELL I 
Sbjct:   33 IGVKFRPETCEQRSESGDKLSMHYTGTLRKDGSKFDSSLDRNSPFEFTLGAGQVIKGWDQGLVGMCIGEKRRLTIPSDLGYGAHGAPPTIPGGATLVFDVELLEIK 138
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BLAST of mRNA_M-pyrifera_M_contig103390.717.1 vs. uniprot
Match: A0A1X7VWK3_AMPQE (Peptidylprolyl isomerase n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VWK3_AMPQE)

HSP 1 Score: 171 bits (432), Expect = 1.060e-52
Identity = 80/106 (75.47%), Postives = 90/106 (84.91%), Query Frame = 1 
Query:    1 IGVKHRVEDCERRSTKGDKLSMHYTGTLYKDGSKFDSSLDRGTPFDFTLGAGQVIKGWDRGLVNMCVGEKRRLVIPSGLGYGDRGAGAKIPGGATLAFDVELLGIN 318
            IG+K +VE+CERR+ KGD+L MHYTGTL +DGS+FDSSL R  PF FTLG GQVIKGWD+GL+NMC GEKRRLVIPS LGYGDRGA  KIPGGATL F+VELL I 
Sbjct:   36 IGIKKKVENCERRTKKGDRLQMHYTGTLKEDGSQFDSSLTRNEPFTFTLGVGQVIKGWDQGLLNMCEGEKRRLVIPSDLGYGDRGAPPKIPGGATLVFEVELLKIE 141
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BLAST of mRNA_M-pyrifera_M_contig103390.717.1 vs. uniprot
Match: A0A166ANG4_EXIGL (Peptidylprolyl isomerase n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A166ANG4_EXIGL)

HSP 1 Score: 170 bits (431), Expect = 1.240e-52
Identity = 79/105 (75.24%), Postives = 89/105 (84.76%), Query Frame = 1 
Query:    1 IGVKHRVEDCERRSTKGDKLSMHYTGTLYKDGSKFDSSLDRGTPFDFTLGAGQVIKGWDRGLVNMCVGEKRRLVIPSGLGYGDRGAGAKIPGGATLAFDVELLGI 315
            +GVKH+  DC  +S KGDKLSMHYTGTL  DGSKFDSSLDR +PFDFTLGAGQVIKGWD+GL++MC+GEKR+L IP  LGYG  GAG KIPGGATL F+VELL I
Sbjct:   25 VGVKHKPADCPIKSQKGDKLSMHYTGTLAADGSKFDSSLDRNSPFDFTLGAGQVIKGWDQGLLDMCIGEKRKLKIPPSLGYGANGAGGKIPGGATLIFEVELLDI 129
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BLAST of mRNA_M-pyrifera_M_contig103390.717.1 vs. uniprot
Match: F4R8I9_MELLP (Peptidylprolyl isomerase n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4R8I9_MELLP)

HSP 1 Score: 169 bits (429), Expect = 3.670e-52
Identity = 78/105 (74.29%), Postives = 89/105 (84.76%), Query Frame = 1 
Query:    1 IGVKHRVEDCERRSTKGDKLSMHYTGTLYKDGSKFDSSLDRGTPFDFTLGAGQVIKGWDRGLVNMCVGEKRRLVIPSGLGYGDRGAGAKIPGGATLAFDVELLGI 315
            IGV H+  +C  ++ KGDKLSMHYTGTL KDGSKFDSSLDR  PFDFTLGAGQVI GWD+GL++MC+GEKR+L IP  +GYGDRGAG  IPGGATL F+VELLGI
Sbjct:   32 IGVTHKPTECPIKTQKGDKLSMHYTGTLQKDGSKFDSSLDRNQPFDFTLGAGQVIAGWDQGLLDMCIGEKRKLRIPPSMGYGDRGAGGVIPGGATLVFEVELLGI 136
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BLAST of mRNA_M-pyrifera_M_contig103390.717.1 vs. uniprot
Match: A0A815PW18_9BILA (Peptidylprolyl isomerase n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815PW18_9BILA)

HSP 1 Score: 168 bits (426), Expect = 7.190e-52
Identity = 78/106 (73.58%), Postives = 89/106 (83.96%), Query Frame = 1 
Query:    1 IGVKHRVEDCERRSTKGDKLSMHYTGTLYKDGSKFDSSLDRGTPFDFTLGAGQVIKGWDRGLVNMCVGEKRRLVIPSGLGYGDRGAGAKIPGGATLAFDVELLGIN 318
            IG+K +VE+C+ +S KGD+L MHYTGTL KDG KFDSS DRG PF FTLG GQVIKGWD+GL+NMCVGE+R+LVIP  LGYGDRGAG  IPGG+TL FDVELL I 
Sbjct:   29 IGIKKKVENCDVKSKKGDRLHMHYTGTLKKDGKKFDSSRDRGDPFVFTLGTGQVIKGWDQGLLNMCVGEQRKLVIPPELGYGDRGAGESIPGGSTLVFDVELLKIE 134
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103390.717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7U0R3_9STRA1.900e-5881.13Peptidylprolyl isomerase n=3 Tax=Monodopsidaceae T... [more]
A0A813C4T4_9DINO2.950e-5780.00Peptidylprolyl isomerase n=1 Tax=Symbiodinium sp. ... [more]
A0A485KT63_9STRA1.320e-5678.30Peptidylprolyl isomerase n=1 Tax=Aphanomyces stell... [more]
A0A6G0XMF8_9STRA1.150e-5578.10Peptidylprolyl isomerase n=1 Tax=Aphanomyces eutei... [more]
W4G1S5_9STRA1.300e-5475.47Peptidylprolyl isomerase n=4 Tax=Aphanomyces TaxID... [more]
A0A8K1FCQ6_PYTOL2.530e-5378.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1X7VWK3_AMPQE1.060e-5275.47Peptidylprolyl isomerase n=1 Tax=Amphimedon queens... [more]
A0A166ANG4_EXIGL1.240e-5275.24Peptidylprolyl isomerase n=1 Tax=Exidia glandulosa... [more]
F4R8I9_MELLP3.670e-5274.29Peptidylprolyl isomerase n=1 Tax=Melampsora larici... [more]
A0A815PW18_9BILA7.190e-5273.58Peptidylprolyl isomerase n=1 Tax=Didymodactylos ca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103390contigM-pyrifera_M_contig103390:331..651 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score175.6
Seed ortholog evalue1.2e-41
Seed eggNOG ortholog157072.XP_008876303.1
Preferred nameFKBP2
KEGG koko:K09569,ko:K09575
Hectar predicted targeting categoryother localisation
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005527,GO:0005528,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005783,GO:0005794,GO:0005829,GO:0006457,GO:0006464,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0061077,GO:0071704,GO:0097159,GO:0140096,GO:1901363,GO:1901564
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0545@1,KOG0549@2759
Ec32 ortholog descriptionSecreted FKBP domain protein
Ec32 orthologEc-06_010450.1
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03110
Exons1
Model size321
Cds size321
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815538.9663846-CDS-M-pyrifera_M_contig103390:330..6511622815538.9663846-CDS-M-pyrifera_M_contig103390:330..651Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103390 331..651 -
1692277454.9042537-CDS-M-pyrifera_M_contig103390:330..6511692277454.9042537-CDS-M-pyrifera_M_contig103390:330..651Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103390 331..651 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103390.717.1prot_M-pyrifera_M_contig103390.717.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103390 331..651 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103390.717.1

>prot_M-pyrifera_M_contig103390.717.1 ID=prot_M-pyrifera_M_contig103390.717.1|Name=mRNA_M-pyrifera_M_contig103390.717.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
IGVKHRVEDCERRSTKGDKLSMHYTGTLYKDGSKFDSSLDRGTPFDFTLG
AGQVIKGWDRGLVNMCVGEKRRLVIPSGLGYGDRGAGAKIPGGATLAFDV
ELLGIN*
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mRNA from alignment at M-pyrifera_M_contig103390:331..651-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103390.717.1 ID=mRNA_M-pyrifera_M_contig103390.717.1|Name=mRNA_M-pyrifera_M_contig103390.717.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=321bp|location=Sequence derived from alignment at M-pyrifera_M_contig103390:331..651- (Macrocystis pyrifera P11B4 male)
ATCGGCGTGAAGCACCGCGTGGAAGATTGCGAACGACGCAGCACCAAGGG
CGACAAGCTGTCCATGCACTACACGGGCACGCTGTACAAGGACGGGTCCA
AGTTCGACTCCTCCCTGGACCGCGGCACGCCGTTCGACTTCACGCTGGGA
GCTGGCCAGGTCATCAAGGGCTGGGATCGCGGTCTGGTGAACATGTGCGT
TGGCGAGAAGCGTCGTTTGGTCATCCCCTCTGGCCTGGGCTACGGCGATC
GTGGCGCAGGCGCCAAGATCCCGGGTGGCGCCACGCTCGCGTTCGACGTG
GAGCTGCTGGGCATCAACTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig103390:331..651-

>mRNA_M-pyrifera_M_contig103390.717.1 ID=mRNA_M-pyrifera_M_contig103390.717.1|Name=mRNA_M-pyrifera_M_contig103390.717.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig103390:331..651- (Macrocystis pyrifera P11B4 male)
ATCGGCGTGAAGCACCGCGTGGAAGATTGCGAACGACGCAGCACCAAGGG
CGACAAGCTGTCCATGCACTACACGGGCACGCTGTACAAGGACGGGTCCA
AGTTCGACTCCTCCCTGGACCGCGGCACGCCGTTCGACTTCACGCTGGGA
GCTGGCCAGGTCATCAAGGGCTGGGATCGCGGTCTGGTGAACATGTGCGT
TGGCGAGAAGCGTCGTTTGGTCATCCCCTCTGGCCTGGGCTACGGCGATC
GTGGCGCAGGCGCCAAGATCCCGGGTGGCGCCACGCTCGCGTTCGACGTG
GAGCTGCTGGGCATCAACTAAATCGGCGTGAAGCACCGCGTGGAAGATTG
CGAACGACGCAGCACCAAGGGCGACAAGCTGTCCATGCACTACACGGGCA
CGCTGTACAAGGACGGGTCCAAGTTCGACTCCTCCCTGGACCGCGGCACG
CCGTTCGACTTCACGCTGGGAGCTGGCCAGGTCATCAAGGGCTGGGATCG
CGGTCTGGTGAACATGTGCGTTGGCGAGAAGCGTCGTTTGGTCATCCCCT
CTGGCCTGGGCTACGGCGATCGTGGCGCAGGCGCCAAGATCCCGGGTGGC
GCCACGCTCGCGTTCGACGTGGAGCTGCTGGGCATCAACTAA
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