mRNA_M-pyrifera_M_contig103183.673.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103183.673.1 vs. uniprot
Match: A0A7S1U8Z7_9STRA (CCT-eta n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8Z7_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.270e-59 Identity = 113/179 (63.13%), Postives = 140/179 (78.21%), Query Frame = 1 Query: 1 VEMDVSAALRDDARGIKGKEQLIVRAFARALEVIPRQIADNAGFDSTDILNRLRMQHAKPDGEGKWMGVDIEEEGVCDTLVRGVWEPVASKLNSFAAATEAACLILSVDETVRNPRSQGDGTS-APGMGGMAGRGMGGRGIGRGKPMSAAMGGGGMRSMV-----GGARGVRQYRGRGG 519 +EM+VS +R+ AR I+GKEQLI+ ARALEVIPRQ++DNAGFD+T++LN+LRM+HAK GKW GVD++ EG+ DT GVWEP A+K+NSFAAA+EAAC+ILS+DETVRNPRS+ G + A G+G G G GGRG RGKP+SAAMGGGGM M+ GG RGVR +RGRGG Sbjct: 443 IEMEVSKFVREQARSIEGKEQLIMNGMARALEVIPRQLSDNAGFDATEVLNQLRMKHAKGTA-GKWYGVDVDVEGITDTFESGVWEPAANKMNSFAAASEAACVILSIDETVRNPRSEQPGAADANGVG--LGAGAGGRGGRRGKPVSAAMGGGGMAGMMXXXRRGGPRGVRAFRGRGG 618
BLAST of mRNA_M-pyrifera_M_contig103183.673.1 vs. uniprot
Match: A0A5A8CXC0_CAFRO (CCT-eta n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CXC0_CAFRO) HSP 1 Score: 202 bits (514), Expect = 5.720e-59 Identity = 109/173 (63.01%), Postives = 131/173 (75.72%), Query Frame = 1 Query: 1 VEMDVSAALRDDARGIKGKEQLIVRAFARALEVIPRQIADNAGFDSTDILNRLRMQHAKPDGEGKWMGVDIEEEGVCDTLVRGVWEPVASKLNSFAAATEAACLILSVDETVRNPRSQGDGTSAPGMGGMAGRGMGGRGIGRGKPMSAAMGGGGMRSMVGGARGVRQYRGRGG 519 VE++V+ LRD ++ I+GK QLIV A+ARALE+IPRQ+A+NAGFD+TDILN+LR HA KW+GVDIE EG+CDT+ RGVWEP ASK NSFA+ATEAAC++LSVDETVRNP+S+ G +GGRG GRG MS AMGG GMR MV G RGVRQ +GRGG Sbjct: 422 VELEVARHLRDYSKTIEGKLQLIVAAYARALELIPRQLAENAGFDATDILNKLRHAHAAKTEACKWIGVDIEHEGICDTMERGVWEPTASKCNSFASATEAACIVLSVDETVRNPKSEQAEQQRRSQG------VGGRGFGRGAAMSQAMGGQGMRGMVAGGRGVRQMQGRGG 588
BLAST of mRNA_M-pyrifera_M_contig103183.673.1 vs. uniprot
Match: A0A662XPU8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPU8_9STRA) HSP 1 Score: 182 bits (462), Expect = 8.410e-53 Identity = 105/181 (58.01%), Postives = 122/181 (67.40%), Query Frame = 1 Query: 1 VEMDVSAALRDDARGIKGKEQLIVRAFARALEVIPRQIADNAGFDSTDILNRLRMQHAKPDGEGKWMGVDIEEEGVCDTLVRGVWEPVASKLNSFAAATEAACLILSVDETVRNPRSQGDGTSAPGMGGMAGRGMGGRGIGRGKPMSAAMGGGGMRSMVGG--------ARGVRQYRGRGG 519 VEM+VS LR AR I+GK QL+V A+A+A E+IPRQIA+NAG D+TDILNRLR +H K EGKW GVDI G+CDT VWEP A+K+NS AAATEAACLILSVDETVRNP+S+ P GG G G PMSAAMGG GMR M+ RGVR +RG+GG Sbjct: 252 VEMEVSRHLRQYARTIEGKAQLLVNAYAKAFEIIPRQIAENAGHDATDILNRLRQKHFKDPEEGKWFGVDISSGGICDTYESHVWEPAANKINSIAAATEAACLILSVDETVRNPKSE-----QPQQGG-----------GGGAPMSAAMGGQGMRGMMXXXXXXXXXMGRGVRAFRGKGG 416
BLAST of mRNA_M-pyrifera_M_contig103183.673.1 vs. uniprot
Match: A0A7R9UFR0_9STRA (CCT-eta n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFR0_9STRA) HSP 1 Score: 181 bits (460), Expect = 3.930e-51 Identity = 104/177 (58.76%), Postives = 134/177 (75.71%), Query Frame = 1 Query: 1 VEMDVSAALRDDARGIKGKEQLIVRAFARALEVIPRQIADNAGFDSTDILNRLRMQHAKPDGEGKWMGVDIEEEGVCDTLVRGVWEPVASKLNSFAAATEAACLILSVDETVRNPRSQGDGTS-APGMG-GMAGRGMGGRGIGRGKPMSAA--MGGGGMRSMVGGARGVRQYRGRGG 519 +EM+VS +R++AR I+GKEQLI+ + ARALEVIPRQ+ADNAGFD+T++LN LRM+HAK D +G+W GV+++ EG+ DT VWEP +K+NSFAAA+EAACLILS+DETVRNPR++ G + A G+G G G GMGGR RGK MGGGG R M +GVR ++GRGG Sbjct: 413 IEMEVSKFVREEARKIEGKEQLIMNSMARALEVIPRQLADNAGFDATEVLNNLRMKHAK-DEKGRWYGVNVDVEGITDTFQSNVWEPAPNKVNSFAAASEAACLILSIDETVRNPRTEQPGAADANGVGLGPGGGGMGGR---RGKAPGGMPPMGGGGRRGMP---KGVRAFKGRGG 582
BLAST of mRNA_M-pyrifera_M_contig103183.673.1 vs. uniprot
Match: A0A836CEV1_9STRA (T-complex protein 1 subunit eta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEV1_9STRA) HSP 1 Score: 179 bits (453), Expect = 3.960e-50 Identity = 94/178 (52.81%), Postives = 127/178 (71.35%), Query Frame = 1 Query: 1 VEMDVSAALRDDARGIKGKEQLIVRAFARALEVIPRQIADNAGFDSTDILNRLRMQHAKPDGEGKWMGVDIEEEGVCDTLVRGVWEPVASKLNSFAAATEAACLILSVDETVRNPRSQGDGTSAPGMGGMAGRGMGGRGIGRGKPMSAAMGGGGMRSMVGGARG-----VRQYRGRGG 519 +EM++S ALR+ +R I GKEQL++ A A+ALE++PRQ+++NAG DSTD+LNRLR HA+P G+W+GV ++EE VCDT+ +GVWEP +K N+ +A EAACLILS+DETVRNP+S+ G + G+G GRG G+P+SA MGG GM M+G RG VR +GR G Sbjct: 413 IEMELSKALREASRAISGKEQLVMGAVAKALEIVPRQLSENAGLDSTDVLNRLRHAHAQPGDGGRWIGVSVDEEDVCDTMAKGVWEPTINKRNALRSAIEAACLILSIDETVRNPQSEQPGAPSQGVG--LGRG--------GQPISAGMGGMGMAGMMGAGRGKLPRGVRAMKGRAG 580
BLAST of mRNA_M-pyrifera_M_contig103183.673.1 vs. uniprot
Match: D7G400_ECTSI (CCT-eta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G400_ECTSI) HSP 1 Score: 178 bits (452), Expect = 5.440e-50 Identity = 86/151 (56.95%), Postives = 114/151 (75.50%), Query Frame = 1 Query: 1 VEMDVSAALRDDARGIKGKEQLIVRAFARALEVIPRQIADNAGFDSTDILNRLRMQHAKPDGEGKWMGVDIEEEGVCDTLVRGVWEPVASKLNSFAAATEAACLILSVDETVRNPRSQGDGTSAPGMGGMAGRGMGGRGIGRGKPMSAAMG 453 +EM++S ALRD ++ IKGK+QLI+ ++A+ALE+IPRQ+ADNAGFD+TD+LNRLR +HA+ GKW GVD++ EGVCDT GVWEP +K NS +ATEAACLILS+DETV+NP+S+ G + G+G +GRG P+SA MG Sbjct: 413 IEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARGGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVG-----------LGRGGPISAGMG 552
BLAST of mRNA_M-pyrifera_M_contig103183.673.1 vs. uniprot
Match: M4BHZ0_HYAAE (CCT-eta n=34 Tax=Oomycota TaxID=4762 RepID=M4BHZ0_HYAAE) HSP 1 Score: 178 bits (451), Expect = 6.940e-50 Identity = 101/181 (55.80%), Postives = 120/181 (66.30%), Query Frame = 1 Query: 1 VEMDVSAALRDDARGIKGKEQLIVRAFARALEVIPRQIADNAGFDSTDILNRLRMQHAKPDGEGKWMGVDIEEEGVCDTLVRGVWEPVASKLNSFAAATEAACLILSVDETVRNPRSQGDGTSAPGMGGMAGRGMGGRGIGRGKPMSAAMGGGGMRSMVGG--------ARGVRQYRGRGG 519 +EM+VS LR AR I+GK QL+V A+A+A E+IPRQIA+NAG D+TDILNRLR +H K GKW GVDI G+CDT VWEP A+K+NS AAATEAACLILSVDETVRNP+S+ +G G G PMSAAMGG GMR M+ RGVR +RG+GG Sbjct: 410 IEMEVSCHLRQYARTIEGKAQLLVNAYAKAFEIIPRQIAENAGHDATDILNRLRQKHFKDPENGKWFGVDITTGGICDTYESHVWEPAANKINSIAAATEAACLILSVDETVRNPKSEQP-----------------QGGGGGAPMSAAMGGQGMRGMMXXXXXXXXXMGRGVRAFRGKGG 573
BLAST of mRNA_M-pyrifera_M_contig103183.673.1 vs. uniprot
Match: A0A482S2P7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2P7_9ARCH) HSP 1 Score: 167 bits (423), Expect = 8.820e-50 Identity = 90/160 (56.25%), Postives = 117/160 (73.12%), Query Frame = 1 Query: 40 RGIKGKEQLIVRAFARALEVIPRQIADNAGFDSTDILNRLRMQHAKPDGEGKWMGVDIEEEGVCDTLVRGVWEPVASKLNSFAAATEAACLILSVDETVRNPRSQGDGTSAPGMGGMAGRGMGGRGIGRGKPMSAAMGGGGMRSMVGGARGVRQYRGRGG 519 R I+GK QL+V+AFARALEV+P+ +ADNAG DS D+LN+LR +HA+ EG+W+GVD+ EG+CDTL GVWEP A+K N+ AAA+EAACLILS+DETVRNP+S+ G + G+G RG K +S AMGG GM M+G +GV ++GRGG Sbjct: 19 RTIQGKMQLVVQAFARALEVVPKNVADNAGIDSIDVLNKLRKEHAQNKPEGRWIGVDVLNEGICDTLQAGVWEPAANKSNALAAASEAACLILSIDETVRNPQSEKPGAPSQGVGLXXXXXXXXRGTR--KMVSEAMGGKGMSGMMG-TKGVNSFKGRGG 175
BLAST of mRNA_M-pyrifera_M_contig103183.673.1 vs. uniprot
Match: A0A5D6XQ58_9STRA (CCT-eta n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ58_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.010e-49 Identity = 104/179 (58.10%), Postives = 117/179 (65.36%), Query Frame = 1 Query: 1 VEMDVSAALRDDARGIKGKEQLIVRAFARALEVIPRQIADNAGFDSTDILNRLRMQHAKPDGEGKWMGVDIEEEGVCDTLVRGVWEPVASKLNSFAAATEAACLILSVDETVRNPRSQGDGTSAPGMGGMAGRGMGGRGIGRGKPMSAAMGGGGMRSMV------GGARGVRQYRGRGG 519 +EM+VS LR AR I+GK QL+V A+A+A EVIPRQIADNAG DSTDILNRLR +H K EGKW GVDI G+CDT VWEP A+K+NS AAATEAACLILSVDETVRNP+S+ PG GG G PMSAAMG G RGVR +RGRGG Sbjct: 412 IEMEVSRHLRQYARTIEGKAQLLVNAYAKAFEVIPRQIADNAGHDSTDILNRLRQKHFKDPDEGKWFGVDINSGGICDTYEAHVWEPAANKINSIAAATEAACLILSVDETVRNPKSEQP-QGGPGQGG-------------GAPMSAAMGXXXXXXXXXXXXXGGLGRGVRAFRGRGG 576
BLAST of mRNA_M-pyrifera_M_contig103183.673.1 vs. uniprot
Match: A0A485KV81_9STRA (CCT-eta n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KV81_9STRA) HSP 1 Score: 177 bits (448), Expect = 2.760e-49 Identity = 98/178 (55.06%), Postives = 122/178 (68.54%), Query Frame = 1 Query: 1 VEMDVSAALRDDARGIKGKEQLIVRAFARALEVIPRQIADNAGFDSTDILNRLRMQHAKPDGEGKWMGVDIEEEGVCDTLVRGVWEPVASKLNSFAAATEAACLILSVDETVRNPRSQGDGTSAPGMGGMAGRGMGGRGIGRGKPMSAAMGGGGMRSMV-----GGARGVRQYRGRGG 519 +EM++S LR+ +R ++GK QL++ A+A+A E+IPRQ++DNAG DSTDILNRLR +H K GKW GVDI G+CDT VWEP A+K+NS AAATEAACLILSVDETVRNP+S+ GMGG G G PMSAAMGG GM+ G +GVR +RG+GG Sbjct: 435 IEMEISRHLREYSRTVEGKAQLLINAYAKAFEIIPRQLSDNAGHDSTDILNRLRQKHFKDPETGKWFGVDINTGGICDTFESHVWEPAANKINSVAAATEAACLILSVDETVRNPKSE---QPQGGMGGGPG----------GAPMSAAMGGQGMKXXXXXXXGGLGKGVRAFRGKGG 599 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103183.673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103183.673.1 >prot_M-pyrifera_M_contig103183.673.1 ID=prot_M-pyrifera_M_contig103183.673.1|Name=mRNA_M-pyrifera_M_contig103183.673.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp MDVSAALRDDARGIKGKEQLIVRAFARALEVIPRQIADNAGFDSTDILNRback to top mRNA from alignment at M-pyrifera_M_contig103183:131..655- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103183.673.1 ID=mRNA_M-pyrifera_M_contig103183.673.1|Name=mRNA_M-pyrifera_M_contig103183.673.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig103183:131..655- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103183:131..655- >mRNA_M-pyrifera_M_contig103183.673.1 ID=mRNA_M-pyrifera_M_contig103183.673.1|Name=mRNA_M-pyrifera_M_contig103183.673.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1038bp|location=Sequence derived from alignment at M-pyrifera_M_contig103183:131..655- (Macrocystis pyrifera P11B4 male)back to top |