mRNA_M-pyrifera_M_contig103138.657.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A1Y1IFU1_KLENI (E3 ubiquitin-protein ligase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFU1_KLENI) HSP 1 Score: 100 bits (250), Expect = 3.310e-21 Identity = 75/207 (36.23%), Postives = 108/207 (52.17%), Query Frame = 1 Query: 25 VQERSMPFLRCTALLHSALFVSTLPVSDRPA--GELLDFL---KLAVAAPVPAFIENWSSGEHWRLAEASHCSVPPCAPV-------------KSVCLPSLFQDFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCR-DVVGECNIHMAEKCGSDC-VFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGKEL 585 VQ +PFLR A+L + PVS A G+L+ + + PVP+ ++ +A S +PP APV K V LP +FQ+ + K C RC +P+ PA+CLLCGT+VC S CC + GEC+ H AE CG +FL+L+S+++++LR G CM S Y+D +GEED + RG+ L Sbjct: 1515 VQAALVPFLRRAAILVHVVSGRLPPVSGPGALDGDLMSYQYWERYLGLPPVPSVLQAMG------IAPPSKQVMPPTAPVVPRHLLLSGRAQLKLVDLPDVFQELLLAEMNRK--CGRCGTVPREPALCLLCGTLVCCKSQCCHVEGRGECSRHAAE-CGMGIGIFLLLRSTQMLILR-GDRACMAPSIYLDVHGEEDAFLKRGRPL 1711
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A507DBV2_9FUNG (E3 ubiquitin-protein ligase n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DBV2_9FUNG) HSP 1 Score: 99.4 bits (246), Expect = 1.160e-20 Identity = 53/126 (42.06%), Postives = 75/126 (59.52%), Query Frame = 1 Query: 211 EASHCSVPPCAPVKSVCLPSLFQDFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCRDVV--GECNIHMAEKCGSDC-VFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGK 579 + S S+P +P + LP F+ L + C +CK +P PA+CLLCG +C+ S CC D GECN H+ E CG D VFL+++ + +M+LR+ GCM SPY+D +GEED + RGK Sbjct: 1953 QLSTMSLPSPSPFTLISLP--FRGEALLQESIRRVCPQCKTVPPEPAICLLCGATICVQSMCCMDDQNRGECNQHIIE-CGKDVGVFLIMKRAAIMVLRSNGRGCMLNSPYLDAHGEEDPGLRRGK 2075
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: S7S5H9_GLOTA (E3 ubiquitin-protein ligase n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) TaxID=670483 RepID=S7S5H9_GLOTA) HSP 1 Score: 97.8 bits (242), Expect = 3.890e-20 Identity = 67/198 (33.84%), Postives = 99/198 (50.00%), Query Frame = 1 Query: 37 SMPFLRCTALLHSALFVSTLPVSDRPAGELLDFLKLAVAAPVPAF--------IENWSSG-----EHWRLAEASHCSVPPCAP-VKSVCLPSLFQDFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCRDVV---GECNIHMAEKCGSDCVFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGK 579 ++PFLR A+L A+ S P E ++ +L V +P ++N SG H ++A + V P + + L D +F CTRCK +P A+CL+CGT+VCL S CC D+ GECNIH E G+ ++ +++ V+ L AGS G Q PY+D +GE DV+M RG+ Sbjct: 1549 TLPFLRRAAILCRAVLPSAYPTPTFEGEEPSEYRRLLVMLGIPPLSDLPKQDTLQNCLSGWCAHYGHSQVASQFNFGVTLEYPTIYRIAQLPLILDNLFGDHEKVMTCTRCKAVPADAAICLICGTVVCLQSHCCWDLDAKRGECNIHTRECGGAIGLYFLVKRCSVLYLYAGS-GAFQSPPYLDVHGEVDVSMRRGR 1745
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A507CIW2_9FUNG (E3 ubiquitin-protein ligase n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CIW2_9FUNG) HSP 1 Score: 97.8 bits (242), Expect = 3.940e-20 Identity = 55/127 (43.31%), Postives = 74/127 (58.27%), Query Frame = 1 Query: 211 EASHCSVPPCAPVKSVCLPSLFQDFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCRD---VVGECNIHMAEKCGSDC-VFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGK 579 + S S+P P V LP + L ++ C CK +P PA+CLLCGT VC+ S CC + V GECN H+ CG D VFL+++ + VM+LR+ + GCM SPY+D +GEED RGK Sbjct: 1964 DQSAMSLPSPLPFTLVTLPR--RGEALLQESTRRICPNCKTLPSEPAICLLCGTTVCVQSMCCMETDSVRGECNSHLFH-CGRDLGVFLIIKRAAVMVLRSNNRGCMVNSPYLDAHGEEDPGFRRGK 2087
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A8H7D122_9AGAR (E3 ubiquitin-protein ligase n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H7D122_9AGAR) HSP 1 Score: 95.1 bits (235), Expect = 3.450e-19 Identity = 60/199 (30.15%), Postives = 99/199 (49.75%), Query Frame = 1 Query: 37 SMPFLRCTALLHSALFVSTLPVSDRPAGELLDFLKLAVAAPVPAF--------IENWSSGEHWRLAEASHCSVPPCAPVKSVCLPSLFQ--------DFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCRDVV--GECNIHMAEKCGSDCVFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGK 579 ++PFLR A+L ++ S P P ++ ++ +L VPA ++N SG ++ S C V PS+++ D +F + C RC +P A+CLLCGT VC+ S CCRD GECN+H+ E G+ V+ +++ ++ + G++G PY+D +GE D++M RG+ Sbjct: 1534 TLPFLRRAAILCRSVLPSCFPTPPSPGNDVCEYNRLLTLLNVPALSDLPNQDTLQNALSGWCAHYGQSHAASQLNCGVVLD--FPSMYRLARLPLVLDTLFGAQDRALTCQRCATVPVDAAICLLCGTTVCMQSDCCRDEDDRGECNVHLRECGGAIGVYFLVKRCMLLYIY-GNNGTFSPPPYLDAHGEVDISMRRGR 1729
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A8H6YVL6_9AGAR (E3 ubiquitin-protein ligase n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H6YVL6_9AGAR) HSP 1 Score: 94.4 bits (233), Expect = 6.180e-19 Identity = 64/199 (32.16%), Postives = 100/199 (50.25%), Query Frame = 1 Query: 37 SMPFLRCTALLHSALFVSTLPVSDRPAGELLDFLKLAVAAPVPAF--------IENWSSG-----EHWRLAEASHCSVPPCAP--VKSVCLPSLFQDFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCRDVV---GECNIHMAEKCGSDCVFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGK 579 ++PFLR A+L ++ S P P G++ ++ +L VPA ++N SG H A +C V P + LP L D +F + C RC +P A+CLLCGT VC+ S CCRD GECN+HM E G+ V+ +++ ++ + + ++G PY+D +GE D++M RG+ Sbjct: 1515 TLPFLRRAAILCRSVLPSCFPTPPSPGGDVCEYNRLLTLLNVPALSDLPNQDTLQNALSGWCAHYGHSHAASQLNCGVILDFPSMYRLARLP-LVLDNLFGAQDRALTCQRCTTVPVDAAICLLCGTTVCMQSDCCRDEDNERGECNLHMRECGGAIGVYYLVKRCMLLYIYS-NNGTFSPPPYLDAHGEVDISMRRGR 1711
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A835V573_VANPL (E3 ubiquitin-protein ligase n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835V573_VANPL) HSP 1 Score: 92.4 bits (228), Expect = 2.610e-18 Identity = 52/120 (43.33%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 235 PCAPVKSVCLPSLFQDFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLN-SGCCRDVVGECNIHMAEKCGSDC-VFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGKELH 588 P P K + LP L+QD L R+ K +C C+ IP+ PA+CLLCG + N CCR C H A CG+ VFL+++ + +++ R+ S + SPY+D++GEEDV+MSRGK LH Sbjct: 671 PAVPFKLMQLPGLYQDL--LQRYVKLKCPECESIPEAPALCLLCGKLCSTNLKPCCR--ASRCLNH-ANSCGAGIGVFLLVRKTTILLQRS-SRQALWPSPYLDDFGEEDVDMSRGKPLH 784
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A2G5B6S6_COERN (E3 ubiquitin-protein ligase n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B6S6_COERN) HSP 1 Score: 92.4 bits (228), Expect = 2.880e-18 Identity = 55/151 (36.42%), Postives = 81/151 (53.64%), Query Frame = 1 Query: 172 IENWSSGEHWRLAEASHCSVPP----CAPVKSVCLPSLFQDFVFLP--------RFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCR-DVVGECNIHMAEKCGSDCVFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGKEL 585 +E W S R+ H S C V +P+L+ V LP R +K C RC G+P PA+CLLCG+ VC S CC D VGECN+HM G+ V+L+++ +++L +GC +PY+D++GE D+ + RG+ L Sbjct: 1618 VEGWLS--ELRMFRRRHTSPMSLGAGCTMAVPVAMPTLYS-LVDLPDRFEILFERSAKSFCPRCNGVPSDPALCLLCGSFVCAQSFCCEEDGVGECNMHMKTCGGTVGVYLLVKKCGLLLLHH-DNGCFMSAPYLDQHGEVDLGLKRGRPL 1764
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A835R9A8_VANPL (E3 ubiquitin-protein ligase n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835R9A8_VANPL) HSP 1 Score: 92.4 bits (228), Expect = 2.910e-18 Identity = 52/120 (43.33%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 235 PCAPVKSVCLPSLFQDFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLN-SGCCRDVVGECNIHMAEKCGSDC-VFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGKELH 588 P P K + LP L+QD L R+ K +C C+ IP+ PA+CLLCG + N CCR C H A CG+ VFL+++ + +++ R+ S + SPY+D++GEEDV+MSRGK LH Sbjct: 1916 PAVPFKLMQLPGLYQDL--LQRYVKLKCPECESIPEAPALCLLCGKLCSTNLKPCCR--ASRCLNH-ANSCGAGIGVFLLVRKTTILLQRS-SRQALWPSPYLDDFGEEDVDMSRGKPLH 2029
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Match: A0A5C3L5X4_9AGAR (E3 ubiquitin-protein ligase n=1 Tax=Coprinopsis marcescibilis TaxID=230819 RepID=A0A5C3L5X4_9AGAR) HSP 1 Score: 92.0 bits (227), Expect = 3.960e-18 Identity = 63/201 (31.34%), Postives = 95/201 (47.26%), Query Frame = 1 Query: 37 SMPFLRCTALLHSALFVSTLPVSDRPAGELLDFLKLAVAAPVPAF--------IENWSSGEHWRLAEASHCSVPPCAPVKSVCLPSLFQ--------DFVFLPRFSKFRCTRCKGIPKTPAMCLLCGTIVCLNSGCCRDVV----GECNIHMAEKCGSDCVFLVLQSSRVMMLRAGSSGCMQKSPYVDEYGEEDVNMSRGK 579 ++PFLR A+L ++ + P A ++ +L +P ++N SG S PC V S+ P ++ D +F CTRC IP A+CLLCGT+VCL SGCC D GECN+H E G ++ +++ ++ L AG+ G SPY+D +GE D++M RG+ Sbjct: 1814 TLPFLRRAAILCRSILPTAFPTPTFGANPPCEYTRLLKLLGIPPLSDLPNQDTLQNALSGWCAHYGHTLTLSQIPC--VVSLDFPGFYRLARLPLVLDNMFQVSEKALTCTRCNTIPLDGAVCLLCGTMVCLQSGCCVDTDYNNRGECNMHTRECGGMVGIYYLVKRGTLLYLNAGN-GTFHPSPYLDAHGEADLSMRRGR 2011 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103138.657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103138.657.1 >prot_M-pyrifera_M_contig103138.657.1 ID=prot_M-pyrifera_M_contig103138.657.1|Name=mRNA_M-pyrifera_M_contig103138.657.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp LGASWAKEVQERSMPFLRCTALLHSALFVSTLPVSDRPAGELLDFLKLAVback to top mRNA from alignment at M-pyrifera_M_contig103138:2..589- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103138.657.1 ID=mRNA_M-pyrifera_M_contig103138.657.1|Name=mRNA_M-pyrifera_M_contig103138.657.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig103138:2..589- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103138:2..589- >mRNA_M-pyrifera_M_contig103138.657.1 ID=mRNA_M-pyrifera_M_contig103138.657.1|Name=mRNA_M-pyrifera_M_contig103138.657.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1176bp|location=Sequence derived from alignment at M-pyrifera_M_contig103138:2..589- (Macrocystis pyrifera P11B4 male)back to top |