mRNA_M-pyrifera_M_contig103044.640.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103044.640.1 vs. uniprot
Match: A0A7X3RBC1_9BACT (Sigma-54 factor interaction domain-containing protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7X3RBC1_9BACT) HSP 1 Score: 64.3 bits (155), Expect = 7.110e-10 Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 1 Query: 52 VMSIAEDAEGDVWFGMAQQGGGAWRYADVAGGSFTYFGAEHGLGGAVPSLDVDREGRLWFGTTEGVYYKEGERFVHL 282 + S+ ED G VW G + G W YAD GSF + LGG + + DR+GR+WF T+EGV Y++GE F L Sbjct: 198 IYSVGEDHTGKVWIGRFRHREGLWCYAD---GSFQSVMVD--LGGGLRKIQCDRKGRMWFSTSEGVIYQDGEGFSRL 269
BLAST of mRNA_M-pyrifera_M_contig103044.640.1 vs. uniprot
Match: A0A6L7VZV7_9BACT (Sigma-54 factor interaction domain-containing protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6L7VZV7_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 2.190e-8 Identity = 29/71 (40.85%), Postives = 37/71 (52.11%), Query Frame = 1 Query: 61 IAEDAEGDVWFGMAQQGGGAWRYADVAGGSFTYFGAEHGLGGAVPSLDVDREGRLWFGTTEGVYYKEGERF 273 + +D G VW G G W YAD T+ LGG + + DREGR+WF T+EGV YK+G F Sbjct: 224 VCQDYTGKVWIGRLNHRDGLWCYADG-----TFQSVRIDLGGGLRKIQCDREGRMWFCTSEGVLYKDGNEF 289
BLAST of mRNA_M-pyrifera_M_contig103044.640.1 vs. uniprot
Match: A0A7X3UKS6_9BACT (AAA domain-containing protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7X3UKS6_9BACT) HSP 1 Score: 58.5 bits (140), Expect = 7.620e-8 Identity = 29/72 (40.28%), Postives = 40/72 (55.56%), Query Frame = 1 Query: 58 SIAEDAEGDVWFGMAQQGGGAWRYADVAGGSFTYFGAEHGLGGAVPSLDVDREGRLWFGTTEGVYYKEGERF 273 ++ +D G VW G +Q+ G W YAD A + E LGG + + DREGR+WF T+ GV Y G+ F Sbjct: 200 TVGKDHTGKVWIGRSQRRDGLWCYADGA-----FQSVEVNLGGELRKIQCDREGRMWFCTSTGVLYWNGDGF 266
BLAST of mRNA_M-pyrifera_M_contig103044.640.1 vs. uniprot
Match: A0A6L7WCJ5_9BACT (AAA domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6L7WCJ5_9BACT) HSP 1 Score: 56.6 bits (135), Expect = 3.620e-7 Identity = 28/72 (38.89%), Postives = 37/72 (51.39%), Query Frame = 1 Query: 58 SIAEDAEGDVWFGMAQQGGGAWRYADVAGGSFTYFGAEHGLGGAVPSLDVDREGRLWFGTTEGVYYKEGERF 273 ++ D G VW G Q G WRY D T+ LGG + + DREGR+WF T+EGV Y+ + F Sbjct: 200 AVGRDRTGHVWIGRYGQRDGLWRYTDG-----TFHRVPVDLGGNLRKIQCDREGRMWFCTSEGVLYQNPDEF 266
BLAST of mRNA_M-pyrifera_M_contig103044.640.1 vs. uniprot
Match: A0A1H7L9B0_9BURK (Histidine kinase n=1 Tax=Duganella sp. CF402 TaxID=1855289 RepID=A0A1H7L9B0_9BURK) HSP 1 Score: 56.2 bits (134), Expect = 5.030e-7 Identity = 43/101 (42.57%), Postives = 53/101 (52.48%), Query Frame = 1 Query: 7 HLQLAERSMHVGLGRVMSIAEDAEGDVWFGMAQQGGGAWRYADVAGGSFTYFGAE--HGL-GGAVPSLDVDREGRLWFGTTEG---VYYKEGERFVHLGKG 291 HL AER + MSIA+D +G +WF Q G G W + +F AE H L G V +L VDR+GRLW GTT G +Y K+ ERFV G Sbjct: 80 HLVPAERGFPNPI--TMSIAQDGDGFIWFA-TQSGLGRWDGYRMRN---FFFNAEDNHSLPGDFVQTLHVDRQGRLWLGTTTGGVAMYDKQTERFVRYPAG 174
BLAST of mRNA_M-pyrifera_M_contig103044.640.1 vs. uniprot
Match: A0A7X4FLJ4_9BACT (AAA domain-containing protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4FLJ4_9BACT) HSP 1 Score: 55.8 bits (133), Expect = 6.760e-7 Identity = 28/79 (35.44%), Postives = 40/79 (50.63%), Query Frame = 1 Query: 46 GRVMSIAEDAEGDVWFGMAQQGGGAWRYADVAGGSFTYFGAEHGLGGAVPSLDVDREGRLWFGTTEGVYYKEGERFVHL 282 G ++ +D G VW G W YAD T+ + LGG + + DREGR+WF T+EGV Y++G+ F Sbjct: 209 GTAYALDKDHTGKVWIGRFGNRDELWCYADG-----TFQSVQVDLGGWLRKIQCDREGRMWFSTSEGVLYQDGDGFCRF 282
BLAST of mRNA_M-pyrifera_M_contig103044.640.1 vs. uniprot
Match: A0A1E7X7L5_9BURK (Two component regulator propeller n=2 Tax=Duganella phyllosphaerae TaxID=762836 RepID=A0A1E7X7L5_9BURK) HSP 1 Score: 55.5 bits (132), Expect = 8.740e-7 Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 7 HLQLAERSMHVGLGRVMSIAEDAEGDVWFGMAQQGGGAWRYADVAGGSFTYFGAE--HGL-GGAVPSLDVDREGRLWFGTT-EGV--YYKEGERFVHLGKG 291 HL AER + VMS+A+D +G +WFG +Q G G W + YF A H L G + +L VDR+GRLW GT+ +G+ Y ++ ERFV + G Sbjct: 43 HLSPAERDFPSPV--VMSVAQDGDGFMWFG-SQAGLGRWDGYQMRN---FYFDANDPHSLPGDFIQTLHVDRQGRLWVGTSIDGLARYDRQNERFVRVAAG 137
BLAST of mRNA_M-pyrifera_M_contig103044.640.1 vs. uniprot
Match: A0A0Q4PBY0_9BURK (Histidine kinase n=4 Tax=unclassified Duganella TaxID=2636909 RepID=A0A0Q4PBY0_9BURK) HSP 1 Score: 55.1 bits (131), Expect = 1.280e-6 Identity = 42/101 (41.58%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 7 HLQLAERSMHVGLGRVMSIAEDAEGDVWFGMAQQGGGAWRYADVAGGSFTYFGAE--HGL-GGAVPSLDVDREGRLWFGTT-EGV--YYKEGERFVHLGKG 291 HL AER+ + VMS+A+D +G +WFG +Q G G W + YF A H L G + +L VDR+GRLW GT+ +G+ Y K ERFV + G Sbjct: 20 HLAPAERNFPSPV--VMSMAQDGDGFLWFG-SQAGLGRWDGYQMRN---FYFDANDPHSLPGDFIQTLHVDRQGRLWVGTSIDGLARYDKHSERFVRVAAG 114
BLAST of mRNA_M-pyrifera_M_contig103044.640.1 vs. uniprot
Match: A0A7X4FFB4_9BACT (AAA domain-containing protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4FFB4_9BACT) HSP 1 Score: 53.9 bits (128), Expect = 3.210e-6 Identity = 26/72 (36.11%), Postives = 41/72 (56.94%), Query Frame = 1 Query: 58 SIAEDAEGDVWFGMAQQGGGAWRYADVAGGSFTYFGAEHGLGGAVPSLDVDREGRLWFGTTEGVYYKEGERF 273 ++ +D G VW G + W YAD GSF A+ L G + + D EGR+WF T++G++Y++G+ F Sbjct: 205 AVGQDHTGKVWIGYREYENKLWCYAD---GSFQSVQAD--LEGTLRKIQCDSEGRMWFSTSQGMFYQDGDGF 271
BLAST of mRNA_M-pyrifera_M_contig103044.640.1 vs. uniprot
Match: A0A7X4FEM6_9BACT (AAA domain-containing protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4FEM6_9BACT) HSP 1 Score: 53.1 bits (126), Expect = 5.990e-6 Identity = 26/72 (36.11%), Postives = 39/72 (54.17%), Query Frame = 1 Query: 58 SIAEDAEGDVWFGMAQQGGGAWRYADVAGGSFTYFGAEHGLGGAVPSLDVDREGRLWFGTTEGVYYKEGERF 273 ++ +D G+VW G G W Y D G+F + L + + DREGR+WFGT+ GV Y++G+ F Sbjct: 197 AVGQDDTGNVWIGQRGPQNGLWCYTD---GNFQPVQVD--LDSRLRKIQCDREGRMWFGTSNGVLYQDGDGF 263 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103044.640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103044.640.1 >prot_M-pyrifera_M_contig103044.640.1 ID=prot_M-pyrifera_M_contig103044.640.1|Name=mRNA_M-pyrifera_M_contig103044.640.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp MHVGLGRVMSIAEDAEGDVWFGMAQQGGGAWRYADVAGGSFTYFGAEHGLback to top mRNA from alignment at M-pyrifera_M_contig103044:3..398+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103044.640.1 ID=mRNA_M-pyrifera_M_contig103044.640.1|Name=mRNA_M-pyrifera_M_contig103044.640.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig103044:3..398+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103044:3..398+ >mRNA_M-pyrifera_M_contig103044.640.1 ID=mRNA_M-pyrifera_M_contig103044.640.1|Name=mRNA_M-pyrifera_M_contig103044.640.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig103044:3..398+ (Macrocystis pyrifera P11B4 male)back to top |