mRNA_M-pyrifera_M_contig102956.626.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102956.626.1 vs. uniprot
Match: A0A3D5DI51_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DI51_9GAMM) HSP 1 Score: 350 bits (899), Expect = 1.200e-113 Identity = 158/214 (73.83%), Postives = 182/214 (85.05%), Query Frame = 1 Query: 7 GGGQIPIRVMSPTDGLSAIANGG--SAFAAQAQAALLNDNAESFYRNGQILGGQTHIAYKQAHTTGMAIDYFEPWSGVVFRVESSITLDEIVNNTRKADWVDQSDVMRWSIGLDRPTFIPWLNKDRTFFLSMQLFDTWYLDHEGDKNTGYFVDEHNFIWTFFFLGNYMRDTLKPTGFLVWEEMANSWTAGLNIEWLMDNHWSIKAGLHTIWAGD 642 G G IP+ +M+P D +SA+A GG + DNAE FYR G +LGG T I YKQ+HTTGMAIDYFEPWSG+VFR+ESSITLD++VNNTR+ADW+D+SD+M+WSIGLDRPTFIPWLNKDRTFFLSMQLFDTWYLDHEGDKN+G+ DEHNFIWTFFFLGNYMRDTLKP GF+VWEEMANSWTAGLN+EWL+DNHWS+K G +TIW GD Sbjct: 491 GDGNIPVTLMTPQDAISAVAQGGRNANXXXXXXXXXXQDNAELFYRTGLLLGGPTSIRYKQSHTTGMAIDYFEPWSGLVFRIESSITLDQLVNNTREADWLDESDIMQWSIGLDRPTFIPWLNKDRTFFLSMQLFDTWYLDHEGDKNSGFLADEHNFIWTFFFLGNYMRDTLKPVGFVVWEEMANSWTAGLNLEWLIDNHWSVKGGFYTIWGGD 704
BLAST of mRNA_M-pyrifera_M_contig102956.626.1 vs. uniprot
Match: A0A1Z8WWV3_9GAMM (Uncharacterized protein n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WWV3_9GAMM) HSP 1 Score: 264 bits (675), Expect = 4.170e-80 Identity = 115/165 (69.70%), Postives = 140/165 (84.85%), Query Frame = 1 Query: 148 ILGGQTHIAYKQAHTTGMAIDYFEPWSGVVFRVESSITLDEIVNNTRKADWVDQSDVMRWSIGLDRPTFIPWLNKDRTFFLSMQLFDTWYLDHEGDKNTGYFVDEHNFIWTFFFLGNYMRDTLKPTGFLVWEEMANSWTAGLNIEWLMDNHWSIKAGLHTIWAGD 642 + GGQT I YKQ+HT G+++DYFEP SGVV R+ES+ T D++VNNTR DWVD+SDVM +S+G DRPTFIP+LNKDRTFFLS+Q+FDTWY DHEGDKNTG+FVDEHN+I TFFF+GNY RDT+KP GF VWEE +NS AG N+EWL++N+WS+K G H IW GD Sbjct: 599 LAGGQTSIEYKQSHTVGLSMDYFEPRSGVVMRIESAWTFDQLVNNTRSVDWVDESDVMAFSLGFDRPTFIPFLNKDRTFFLSLQIFDTWYWDHEGDKNTGFFVDEHNWITTFFFIGNYARDTVKPIGFYVWEEASNSHVAGFNVEWLINNNWSMKGGFHLIWEGD 763
BLAST of mRNA_M-pyrifera_M_contig102956.626.1 vs. uniprot
Match: A0A7C7X267_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7X267_9GAMM) HSP 1 Score: 259 bits (662), Expect = 7.020e-79 Identity = 118/203 (58.13%), Postives = 155/203 (76.35%), Query Frame = 1 Query: 22 PIRVMSPTDGLSAIANGGSAFAAQAQAALLNDNAESFYRNGQILGGQTHIAYKQAHTTGMAIDYFEPWSGVVFRVESSITLDEIVNNTRKADWVDQSDVMRWSIGLDRPTFIPWLNKDRTFFLSMQLFDTWYLDHEGDKNTGYFVDEHNFIWTFFFLGNYMRDTLKPTGFLVWEEMANSWTAGLNIEWLMDNHWSIKAGLHTI 630 P+ VM P + A A GG A A +A L NDNA FY + Q+ GGQT I Y + HT+G+++DYF+ WSG+VFRVESS T DEIVNNTRKA+WVD SDV R+S+GLDRPTF+ +LNK+RTFFLS Q+FDTWYLD EG K+ GY+VD+HN I+TF++ Y RD +KP+GFLVWE+ +++W G N+ W ++NHWS+K G+H + Sbjct: 482 PVAVMEPAAAIQAAAAGGYAPAIEA---LQNDNARLFYDDLQVFGGQTSIVYDKVHTSGLSMDYFDDWSGIVFRVESSYTFDEIVNNTRKANWVDHSDVFRFSLGLDRPTFLRFLNKNRTFFLSFQVFDTWYLDQEGGKSDGYYVDDHNLIYTFYWETYYKRDQIKPSGFLVWEDGSDTWVFGANVSWFINNHWSLKTGVHLV 681
BLAST of mRNA_M-pyrifera_M_contig102956.626.1 vs. uniprot
Match: A0A7V0ZJE3_9GAMM (Uncharacterized protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7V0ZJE3_9GAMM) HSP 1 Score: 254 bits (650), Expect = 2.310e-77 Identity = 118/203 (58.13%), Postives = 149/203 (73.40%), Query Frame = 1 Query: 22 PIRVMSPTDGLSAIANGGSAFAAQAQAALLNDNAESFYRNGQILGGQTHIAYKQAHTTGMAIDYFEPWSGVVFRVESSITLDEIVNNTRKADWVDQSDVMRWSIGLDRPTFIPWLNKDRTFFLSMQLFDTWYLDHEGDKNTGYFVDEHNFIWTFFFLGNYMRDTLKPTGFLVWEEMANSWTAGLNIEWLMDNHWSIKAGLHTI 630 PI VM+P + + A A G A A A L +DNA FY + Q+ GG T I Y Q HTTG++ DYF+ WSG+VFRVESS T DE VNNT KA+W D+SDV+R+S+GLDRPTF+ WLN DRTFFLS+Q FDTWYLDHEG K GY +D+HN I+TF++ Y RD +KP+GF VWE+ +++W G NI W +DNHWS+K G+H I Sbjct: 452 PIAVMNPDEAIKAAAAAGYAPALDA---LEHDNARLFYDDLQVFGGLTSIIYDQVHTTGLSADYFDDWSGIVFRVESSYTFDEPVNNTYKANWADESDVVRYSLGLDRPTFLRWLNTDRTFFLSLQYFDTWYLDHEGSKTDGYIIDDHNRIYTFYWETFYNRDRVKPSGFFVWEDNSDTWVVGANITWFIDNHWSVKTGVHLI 651
BLAST of mRNA_M-pyrifera_M_contig102956.626.1 vs. uniprot
Match: A0A661GWB5_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GWB5_9GAMM) HSP 1 Score: 253 bits (646), Expect = 8.940e-77 Identity = 114/205 (55.61%), Postives = 151/205 (73.66%), Query Frame = 1 Query: 16 QIPIRVMSPTDGLSAIANGGSAFAAQAQAALLNDNAESFYRNGQILGGQTHIAYKQAHTTGMAIDYFEPWSGVVFRVESSITLDEIVNNTRKADWVDQSDVMRWSIGLDRPTFIPWLNKDRTFFLSMQLFDTWYLDHEGDKNTGYFVDEHNFIWTFFFLGNYMRDTLKPTGFLVWEEMANSWTAGLNIEWLMDNHWSIKAGLHTI 630 ++P+ VM+P + + A A+ G A A A L +DNA FY + Q+ GG T I Y Q HTTG+++DYF+ W+G+VFRVESS T DE++NNT KADW+D+ DV+R+S+GLDRPTFI LNKDRTFFLS Q FDTWYLDHEG GY +++HN I+TF++ Y RDT+KP+GF V+EE + +W G N+ W +DNHWS+K G H I Sbjct: 450 EVPVAVMNPQEAIQAAADAGYAPALDA---LQHDNARLFYDDLQVFGGLTSIRYSQVHTTGLSMDYFDDWTGIVFRVESSYTFDELINNTMKADWIDEGDVLRYSLGLDRPTFIRLLNKDRTFFLSFQFFDTWYLDHEGSNTDGYILNDHNRIYTFYWETYYARDTVKPSGFAVYEEESKAWVFGANVTWFIDNHWSVKTGAHII 651
BLAST of mRNA_M-pyrifera_M_contig102956.626.1 vs. uniprot
Match: A0A1Y5EH28_9GAMM (Uncharacterized protein n=1 Tax=Cycloclasticus sp. 46_120_T64 TaxID=1856281 RepID=A0A1Y5EH28_9GAMM) HSP 1 Score: 219 bits (557), Expect = 7.670e-64 Identity = 110/218 (50.46%), Postives = 153/218 (70.18%), Query Frame = 1 Query: 1 SGGGGQI--PIRVMSPTDGLSAIANGGSAFAAQA--QAALLNDNAESFYRNGQILGGQTHIAYKQAHTTGMAIDYFEPWSGVVFRVESSITLDEIVNNTRKADWVDQSDVMRWSIGLDRPTFIPWLNKDRTFFLSMQLFDTWYLDHEGDKNTGYFVDEHNFIWTFFFLGNYMRDTLKPTGFLVWEEMANSWTAGLNIEWLMDNHWSIKAGLHTIWAGD 642 +GGG + PI VMSP +G++ +A + A QA QAA+ NA FY+ G GG T + + Q HTTG++ DYF+ +G+VFRVESS + DE+VNNT KADWVD SDV R+S+G+DRPT I LN R+FFLS Q+F+T YLD+EGD++ G+ +E+N+IWTFF YMRD L P F V+E+ +N+ G +I++L+DNH+S+K G+H I G+ Sbjct: 424 AGGGSSLETPITVMSPEEGIAFVAATSTVAAQQAAAQAAIDQGNASLFYKTGTTAGGLTSVIFDQVHTTGLSFDYFDDNTGMVFRVESSYSFDELVNNTYKADWVDTSDVFRFSLGIDRPTMIRALNPTRSFFLSAQMFNTHYLDYEGDEDAGFVPNENNYIWTFFAQTQYMRDRLIPNAFYVYEDGSNTHLYGASIQYLLDNHFSVKGGIHVISGGE 641
BLAST of mRNA_M-pyrifera_M_contig102956.626.1 vs. uniprot
Match: A0A2A4S7T3_9GAMM (Uncharacterized protein n=1 Tax=Piscirickettsiaceae bacterium TaxID=2030828 RepID=A0A2A4S7T3_9GAMM) HSP 1 Score: 200 bits (509), Expect = 7.960e-57 Identity = 109/225 (48.44%), Postives = 146/225 (64.89%), Query Frame = 1 Query: 1 SGGGGQIPIRVMSPTDGLSAIA-NGGSAFAAQAQAALLNDNAESFYRN-GQI----------LGGQTHIAYKQAHTTGMAIDYFEPWSGVVFRVESSITLDEIVNNTRKADWVDQSDVMRWSIGLDRPTFIPWLNKDRTFFLSMQLFDTWYLDHEGDKNTGYFVDEHNFIWTFFFLGNYMRDTLKPTGFLVWEEMANSWTAGLNIEWLMDNHWSIKAGLHTIWAG 639 +GG +PI+VM+P ++ +A NG A AQAA+ DNA FYR+ G + LGG T + + + HTTG++ DYF+ ++GVVFRVESS T DE VNNT KADWVD SDV R S+G+DRPTFI +LN RTFFLS Q+F+T Y+D EGD+ G+ E N I T F YMRD L P F V+E+ + + G ++++L DNH+SIK G++ I G Sbjct: 433 AGGPIALPIQVMTPDAAIAEVAANGSGAAQIAAQAAIAQDNASLFYRSMGNVIPGFGAXXXXLGGSTSLVFDRIHTTGLSFDYFDDYTGVVFRVESSYTFDEFVNNTYKADWVDTSDVFRVSLGMDRPTFIKFLNPLRTFFLSAQVFNTHYMDWEGDRFAGFVPPEDNIILTLFAQTQYMRDRLIPNAFYVYEDGSQTSVWGASVQFLFDNHYSIKGGINVISGG 657
BLAST of mRNA_M-pyrifera_M_contig102956.626.1 vs. uniprot
Match: A0A523NQU8_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NQU8_9PROT) HSP 1 Score: 166 bits (420), Expect = 3.270e-49 Identity = 70/83 (84.34%), Postives = 78/83 (93.98%), Query Frame = 1 Query: 394 MQLFDTWYLDHEGDKNTGYFVDEHNFIWTFFFLGNYMRDTLKPTGFLVWEEMANSWTAGLNIEWLMDNHWSIKAGLHTIWAGD 642 MQLFDTWYLDHEGDK+TGY+VD+HNFI+TFFFL NYMRDTLKP GF+VWEE ANSWTAGL +EWLMDNHWSIK G++TIWAGD Sbjct: 1 MQLFDTWYLDHEGDKDTGYYVDKHNFIYTFFFLANYMRDTLKPVGFIVWEEAANSWTAGLTVEWLMDNHWSIKGGMYTIWAGD 83
BLAST of mRNA_M-pyrifera_M_contig102956.626.1 vs. uniprot
Match: A0A7Y3M6K3_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3M6K3_9DELT) HSP 1 Score: 167 bits (424), Expect = 1.270e-44 Identity = 70/161 (43.48%), Postives = 112/161 (69.57%), Query Frame = 1 Query: 154 GGQTHIAYKQAHTTGMAIDYFEPWSGVVFRVESSITLDEIVNNTRKADWVDQSDVMRWSIGLDRPTFIPWLNKDRTFFLSMQLFDTWYLDHEGDKNTGYFVDEHNFIWTFFFLGNYMRDTLKPTGFLVWEEMANSWTAGLNIEWLMDNHWSIKAGLHTIWA 636 G Y + +T G+A+DYF+ ++G+VFR+ESS + + V+N DW+D SD++++++G+DRPTFI +LN RTFF+S Q+F T+++D+EGD G D HN+I+T F G YMRD L P GF+V+E+ +W +G +++L+ N+WS+ AG++ W Sbjct: 527 GASIEFVYDKVNTLGLAVDYFDDFTGIVFRLESSWSNNVPVSNKNDLDWLDSSDLVQFALGMDRPTFIKFLNPTRTFFISSQIFHTYWMDYEGDNQNGMIGDRHNWIYTLFIQGQYMRDRLTPQGFIVFEQSTGAWISGFQLQYLLTNNWSVLAGVNVSWG 687
BLAST of mRNA_M-pyrifera_M_contig102956.626.1 vs. uniprot
Match: C6L0Z2_9BACT (Putative transcriptional regulatory protein LysR n=1 Tax=uncultured bacterium TaxID=77133 RepID=C6L0Z2_9BACT) HSP 1 Score: 102 bits (254), Expect = 1.430e-21 Identity = 58/160 (36.25%), Postives = 84/160 (52.50%), Query Frame = 1 Query: 169 IAYKQAHTTGMAIDYFEPWSGVVFRVESSITLDEIVNNTRKADWVDQSDVMRWSIGLDRPTFIPWLNKDRTFFLSMQLFDTWYLDHEGDKNTGYFVD----EHNFIWTFFFLGNYMRDTLKPTGFLVWEEMANSWTAGLNIEWLMDNHWSIKAGLHTIWA 636 I + + + G ++D + VFRVE+++T E N+ + +SDV RW +G DRPTFIP+LNK R F LS QLF LDHE G V E N+I TF G Y DT+ P + + + T +++WL+DNHW + + +A Sbjct: 448 IHFPRVNLLGGSLDIYADSIKSVFRVEAAVTSGEEFANSLERRLYSESDVARWVVGWDRPTFIPFLNKRRAFLLSAQLFGQHLLDHERKTVNGIDVGMPDHEDNYIMTFLLKGWYEADTISPQLIIAHDFEGQATTVSPSVDWLIDNHWRLVVAANIKYA 607 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102956.626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102956.626.1 >prot_M-pyrifera_M_contig102956.626.1 ID=prot_M-pyrifera_M_contig102956.626.1|Name=mRNA_M-pyrifera_M_contig102956.626.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=214bp SGGGGQIPIRVMSPTDGLSAIANGGSAFAAQAQAALLNDNAESFYRNGQIback to top mRNA from alignment at M-pyrifera_M_contig102956:14..655+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102956.626.1 ID=mRNA_M-pyrifera_M_contig102956.626.1|Name=mRNA_M-pyrifera_M_contig102956.626.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig102956:14..655+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102956:14..655+ >mRNA_M-pyrifera_M_contig102956.626.1 ID=mRNA_M-pyrifera_M_contig102956.626.1|Name=mRNA_M-pyrifera_M_contig102956.626.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1284bp|location=Sequence derived from alignment at M-pyrifera_M_contig102956:14..655+ (Macrocystis pyrifera P11B4 male)back to top |