mRNA_M-pyrifera_M_contig102920.618.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102920.618.1 vs. uniprot
Match: A0A383WD89_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WD89_TETOB) HSP 1 Score: 59.3 bits (142), Expect = 1.240e-8 Identity = 33/66 (50.00%), Postives = 42/66 (63.64%), Query Frame = 1 Query: 1 GLSEPLGALLAVYVLRDYLLARAHLMDAGLCVVGGVMTAVSVLELWPEVRAHSQPDRLVHSLTLCA 198 GLSEP+GAL A++VLR ++ A +D L VGGVM AV LELWPE R Q R++ + L A Sbjct: 296 GLSEPIGALFALFVLRPFV-ASLERLDYVLAAVGGVMLAVCGLELWPEARKCKQDVRMLQGVLLGA 360
BLAST of mRNA_M-pyrifera_M_contig102920.618.1 vs. uniprot
Match: A0A7J7QSC3_9CHLO (Zinc permease family n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QSC3_9CHLO) HSP 1 Score: 57.4 bits (137), Expect = 4.590e-8 Identity = 31/64 (48.44%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 GLSEPLGALLAVYVLRDYLLARAHLMDAGLCVVGGVMTAVSVLELWPEVRAHSQPDRLVHSLTL 192 GLSEP+GAL A++VLR ++++ L D L VGGVM V LELWPE R Q R+ + L Sbjct: 190 GLSEPIGALFALFVLRPFVVSLERL-DYVLAAVGGVMLGVCGLELWPEARRCRQDVRMAQGMLL 252
BLAST of mRNA_M-pyrifera_M_contig102920.618.1 vs. uniprot
Match: A0A383WPF5_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WPF5_TETOB) HSP 1 Score: 55.5 bits (132), Expect = 2.930e-7 Identity = 32/64 (50.00%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 1 GLSEPLGALLAVYVLRDYLLARAHLMDAGLCVVGGVMTAVSVLELWPEVRAHSQPDRLVHSLTL 192 GLSEP+GALLA+ V + ++ + A L L GGVM AV VLELWPE R Q RL + L Sbjct: 397 GLSEPVGALLALLVFKPFVTSLAQL-GYVLAATGGVMLAVCVLELWPEGRRCGQDGRLWQGIAL 459
BLAST of mRNA_M-pyrifera_M_contig102920.618.1 vs. uniprot
Match: A0A2P6V7Z2_9CHLO (Pyruvate kinase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V7Z2_9CHLO) HSP 1 Score: 55.5 bits (132), Expect = 3.000e-7 Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 1 Query: 1 GLSEPLGALLAVYVLRDYLL-ARAHLMDAGLCVVGGVMTAVSVLELWPEVRAHSQPDRLVHSLTL 192 GLSEPLGALLA+ +++ +L AR H + L VGG+M AVSVLELWPE R R+ + L Sbjct: 287 GLSEPLGALLALLLVKPFLTEARLHYI---LGFVGGLMAAVSVLELWPEARKCRHDRRMYTGIAL 348
BLAST of mRNA_M-pyrifera_M_contig102920.618.1 vs. uniprot
Match: A0A7S3LMR0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LMR0_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 4.610e-7 Identity = 30/59 (50.85%), Postives = 38/59 (64.41%), Query Frame = 1 Query: 1 GLSEPLGALLAVYVLRDYLLARAHLMDAGLCVVGGVMTAVSVLELWPEVRAHSQPDRLV 177 GLSEPLGAL+A+ +LR L+D L V GVMTAVS LEL PE R + +P ++ Sbjct: 201 GLSEPLGALVALTLLRPLFREYPWLVDYVLVFVAGVMTAVSFLELLPEARQYRKPKSVI 259
BLAST of mRNA_M-pyrifera_M_contig102920.618.1 vs. uniprot
Match: E1ZEX3_CHLVA (Uncharacterized protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZEX3_CHLVA) HSP 1 Score: 51.6 bits (122), Expect = 1.930e-6 Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 1 Query: 1 GLSEPLGALLAVYVLRDYLL-ARAHLMDAGLCVVGGVMTAVSVLELWPEVRAHSQPDRLVHSLTLCATL 204 GLSEP+GALLA+ +++ +L AR H + L VGG+M AVS+LELWPE + R+ + + L Sbjct: 73 GLSEPVGALLALLLVKPFLTEARLHYI---LGFVGGLMAAVSLLELWPEAKRCHHDRRMAWGIAVGVVL 138
BLAST of mRNA_M-pyrifera_M_contig102920.618.1 vs. uniprot
Match: A0A090M8P7_OSTTA (Zinc/iron permease n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M8P7_OSTTA) HSP 1 Score: 52.0 bits (123), Expect = 4.330e-6 Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 1 Query: 1 GLSEPLGALLAVYVLRDYLL-ARA-HLMDAGLCVVGGVMTAVSVLELWPEVRAHSQPDRLVHSLTL 192 GLSEP+GAL+A+ ++ YL AR HL+ A GG+M AVSVLELWPE + + D + + + Sbjct: 203 GLSEPIGALVALKFMKPYLTPARLEHLLAA----TGGIMIAVSVLELWPEAKKCANNDSMYRGILI 264
BLAST of mRNA_M-pyrifera_M_contig102920.618.1 vs. uniprot
Match: A0A059LRG3_9CHLO (Pyruvate kinase n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LRG3_9CHLO) HSP 1 Score: 51.2 bits (121), Expect = 9.380e-6 Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 1 Query: 1 GLSEPLGALLAVYVLRDYLL-ARAHLMDAGLCVVGGVMTAVSVLELWPEVRAHSQPDRL 174 GLSEP+GAL A+ +R ++ A H L VVGGVM AV VLELWPE R RL Sbjct: 242 GLSEPIGALCALLFIRPWVSPATVH---GALGVVGGVMAAVCVLELWPEARKCRSDRRL 297
BLAST of mRNA_M-pyrifera_M_contig102920.618.1 vs. uniprot
Match: A0A2P6TI93_CHLSO (Pyruvate kinase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TI93_CHLSO) HSP 1 Score: 51.2 bits (121), Expect = 9.390e-6 Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 1 Query: 1 GLSEPLGALLAVYVLRDYLL-ARAHLMDAGLCVVGGVMTAVSVLELWPEVRAHSQPDRL 174 GLSEPLGALLA+ +++ +L R H + L VGG+M AVS+LELWPE + R+ Sbjct: 281 GLSEPLGALLALLLVKPFLTETRLHYI---LGFVGGLMAAVSLLELWPEAKRCRNDQRM 336
BLAST of mRNA_M-pyrifera_M_contig102920.618.1 vs. uniprot
Match: A0A835XLB9_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XLB9_9CHLO) HSP 1 Score: 50.8 bits (120), Expect = 1.250e-5 Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 1 Query: 1 GLSEPLGALLAVYVLRDYL-LARAHLMDAGLCVVGGVMTAVSVLELWPEVR 150 GLSEPLGALL++ +LR + L R H + L VGGVM AV +ELWPE R Sbjct: 343 GLSEPLGALLSLVLLRPFFSLERLHYL---LAFVGGVMLAVCAIELWPEGR 390 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102920.618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102920.618.1 >prot_M-pyrifera_M_contig102920.618.1 ID=prot_M-pyrifera_M_contig102920.618.1|Name=mRNA_M-pyrifera_M_contig102920.618.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=70bp GLSEPLGALLAVYVLRDYLLARAHLMDAGLCVVGGVMTAVSVLELWPEVRback to top mRNA from alignment at M-pyrifera_M_contig102920:428..637- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102920.618.1 ID=mRNA_M-pyrifera_M_contig102920.618.1|Name=mRNA_M-pyrifera_M_contig102920.618.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=210bp|location=Sequence derived from alignment at M-pyrifera_M_contig102920:428..637- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102920:428..637- >mRNA_M-pyrifera_M_contig102920.618.1 ID=mRNA_M-pyrifera_M_contig102920.618.1|Name=mRNA_M-pyrifera_M_contig102920.618.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig102920:428..637- (Macrocystis pyrifera P11B4 male)back to top |