mRNA_M-pyrifera_M_contig1029.614.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1029.614.1
Unique NamemRNA_M-pyrifera_M_contig1029.614.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig1029.614.1 vs. uniprot
Match: A0A6H5KLX5_9PHAE (HORMA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLX5_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 1.240e-94
Identity = 148/241 (61.41%), Postives = 181/241 (75.10%), Query Frame = 1 
Query:   13 RQTWNEAITEIVIDFMEAAAHTLLHARKVYPQDIFERRRKYGVPVWMSRHPDLNNYIFQVLLQAKSLIADGVVRKVCVCFFAEGGRADRTPVERIAVDIQIDGEXXXXXXXXXXXXDTRRRRDEDRSLDQTSLQEVEDQLRSALRQIQKSSAHLPTRQGCTFALHLQAHE--ESQVEERDHLEGHEGSSAVRSALRGGKWLLADIDEQGLIAEPGRRQLVPIKSVRGPGLRLDLSAEMGDC 729
            +Q W+EA+ +I+++F+EAA H+LLH+R+ YPQDIFERRRKYGVPVWMSRHP+LN YI +VLL+ K L+  GVVR+V VCFF E    D+ PVER+A D+++D                    D D S+D TSLQ+VEDQLRSAL QIQKSSAHLPTRQGCTFALH++AHE  E QV   D  + +  SS VRSALRGGKW+LAD   QG++AEPGRR++VPIKSVRG GL L+LS EMGDC
Sbjct:    6 QQGWSEAVVDILVEFLEAATHSLLHSRRTYPQDIFERRRKYGVPVWMSRHPELNAYISEVLLRVKLLMEQGVVRRVLVCFFLEEEHVDQAPVERVAFDVRVDN-------------------DGDDSVDSTSLQDVEDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHEDNEGQVGRHDATQDYAQSSPVRSALRGGKWVLADSVAQGVLAEPGRRRIVPIKSVRGRGLSLNLSTEMGDC 227
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BLAST of mRNA_M-pyrifera_M_contig1029.614.1 vs. uniprot
Match: A0A835YLW3_9STRA (HORMA domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLW3_9STRA)

HSP 1 Score: 110 bits (276), Expect = 5.960e-26
Identity = 77/229 (33.62%), Postives = 116/229 (50.66%), Query Frame = 1 
Query:   28 EAITEIVIDFMEAAAHTLLHARKVYPQDIFERRRKYGVPVWMSRHPDLNNYIFQVLLQAKSLIADGVVRKVCVCFFAEGGRADRTPVERIAVDIQIDGEXXXXXXXXXXXXDTRRRRDEDRSLDQTSLQEVEDQLRSALRQIQKSSAHLPTRQGCTFALHLQAHEESQVEERDHLEGHEGSSAVRSALRGGKWLLADIDEQGLIAEPGRRQLVPIKSVRGPGLRLDLSA 714
            E   +++++F+EAA HT LHAR      +FERRR Y VPVWMSRHP+LN YI Q L  A+ L+ + ++ +V +CF  E G  +    E    ++Q   +                      +LD  ++ E+E  LR+ L +I  S A LP+R+GCTF+L +               G   ++A  +A  G KWL++D  +       G  ++VP++SVR P  RL   A
Sbjct:   27 ELRADVLLEFLEAAIHTTLHAR-----GMFERRRAYEVPVWMSRHPELNEYIAQALANARPLLVERLLHRVYLCFKRENGAIE----ESFVFELQESDDAPAGPI----------------TLD--AVTELEAHLRAVLVKINMSGAALPSREGCTFSLLIGC------------AGAGAATARAAAAAGDKWLVSDAQDG---RPAGELRVVPVRSVRVPHFRLQAYA 213
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BLAST of mRNA_M-pyrifera_M_contig1029.614.1 vs. uniprot
Match: A0A7S1HTY5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HTY5_9EUGL)

HSP 1 Score: 88.2 bits (217), Expect = 1.710e-17
Identity = 67/234 (28.63%), Postives = 106/234 (45.30%), Query Frame = 1 
Query:   40 EIVIDFMEAAAHTLLHARKVYPQDIFERRRKYGVPVWMSRHPDLNNYIFQVLLQAKSLIADGVVRKVCVCFFAEGGRADRTPVERIAVDIQIDGEXXXXXXXXXXXXDTRRRRDEDRSLDQTSLQEVEDQLRSALRQIQKSSAHLPTRQGCTFALHLQAHEESQVEERDHLEGHEGSSAVRSALRGGKWLLADIDEQGLIAEPGRRQLVPIKSVRG---PGLRLDLSAEMGDCP 732
            ++++ F+E A HT+L  R+VYP ++FE RRKYG PVW+SRHP L +Y+ + +L  +  ++ G++ +  +    + G       ER  + I  DG                               E+E  LR+ L +++   A L      TFA+ + +  E+  E RD L            + GG     D ++    A P  R++VP+KS      PGLRL L  E  + P
Sbjct:    5 DVLLQFLEVATHTVLFCRQVYPVEVFEERRKYGAPVWISRHPALRDYVSRTVLSLRDWMSQGLIERFNIILKDDEGFV----WERFVLQIASDGAGPTSQCPP----------------------ELESALRAFLLKLRVCDAQLAPTPCTTFAIVVDSASEAVTETRDWLRAEAPDVPDYVDVDGG-----DSED----APPMHRRVVPLKSSAPYAIPGLRLQLWVEQAEHP 203
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BLAST of mRNA_M-pyrifera_M_contig1029.614.1 vs. uniprot
Match: A0A4D9CXK7_9STRA (HORMA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXK7_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.770e-17
Identity = 48/99 (48.48%), Postives = 66/99 (66.67%), Query Frame = 1 
Query:   22 WNEAITEIVIDFMEAAAHTLLHARKVYPQDIFERRRKYGVPVWMSRHPDLNNYIFQVLLQAKSLIADGVVRKVCVCFFAEGGRADR---TPVERIAVDI 309
            W EA T ++++F+E A H +L+ R VYP  IFERRRKY VPV+MSRHPDLN YI +VL  A ++  +G V KV V  +  G R+D+    P+E  A ++
Sbjct:    7 WQEA-TAVLLEFLEVAVHQVLYNRGVYPPAIFERRRKYEVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLY--GSRSDQGGHAPLESFAFEL 102
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BLAST of mRNA_M-pyrifera_M_contig1029.614.1 vs. uniprot
Match: W7TK13_9STRA (Mad2 mitotic arrest deficient-like 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK13_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.890e-17
Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 1 
Query:   37 TEIVIDFMEAAAHTLLHARKVYPQDIFERRRKYGVPVWMSRHPDLNNYIFQVLLQAKSLIADGVVRKVCVCFFAEGGRADR---TPVERIAVDI 309
            T ++++F+E A H +L+ R VYP  IFERRRKY VPV+MSRHPDLN YI +VL  A ++  +G V KV V  +  G R+D+    P+E  A ++
Sbjct:   11 TAVLLEFLEVAVHQVLYNRGVYPPAIFERRRKYDVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLY--GSRSDQEGHAPLESFAFEL 102
[Close]
BLAST of mRNA_M-pyrifera_M_contig1029.614.1 vs. uniprot
Match: A0A067R4L3_ZOONE (Mitotic spindle assembly checkpoint protein MAD2B n=4 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067R4L3_ZOONE)

HSP 1 Score: 87.4 bits (215), Expect = 4.870e-17
Identity = 45/91 (49.45%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:   37 TEIVIDFMEAAAHTLLHARKVYPQDIFERRRKYGVPVWMSRHPDLNNYIFQVLLQAKSLIADGVVRKVCVCFFAEGGRADRTPVERIAVDI 309
            ++I+I+F+E A H +L+ R +YP  IF RR+KYGVPV MS HP LN YI + L   K L+    VRKV V FF E     + PVER   DI
Sbjct:   35 SDILIEFLEVAIHNVLYVRNIYPTSIFVRRKKYGVPVQMSTHPYLNEYITECLKTIKDLLTKNEVRKVTVVFFDEA----QIPVERFIFDI 121
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BLAST of mRNA_M-pyrifera_M_contig1029.614.1 vs. uniprot
Match: A0A2J7QN68_9NEOP (Mitotic spindle assembly checkpoint protein MAD2B n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QN68_9NEOP)

HSP 1 Score: 89.4 bits (220), Expect = 6.000e-17
Identity = 46/91 (50.55%), Postives = 58/91 (63.74%), Query Frame = 1 
Query:   37 TEIVIDFMEAAAHTLLHARKVYPQDIFERRRKYGVPVWMSRHPDLNNYIFQVLLQAKSLIADGVVRKVCVCFFAEGGRADRTPVERIAVDI 309
            ++I+IDF+E A H +L+AR +YP  IF RR+KYGVPV MS HP LN YI + L   + L+    VRKV V FF E  R    P+ER   DI
Sbjct:  125 SDILIDFLEVAVHNVLYARNIYPASIFVRRKKYGVPVQMSTHPYLNEYITECLKTIRDLLKKNEVRKVTVVFFDEVHR----PIERFVFDI 211
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BLAST of mRNA_M-pyrifera_M_contig1029.614.1 vs. uniprot
Match: A0A6L2PS37_COPFO (HORMA domain-containing protein n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2PS37_COPFO)

HSP 1 Score: 84.7 bits (208), Expect = 4.100e-16
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:   37 TEIVIDFMEAAAHTLLHARKVYPQDIFERRRKYGVPVWMSRHPDLNNYIFQVLLQAKSLIADGVVRKVCVCFFAEGGRADRTPVERIAVDI 309
            ++I+I+F+E A H +L+ R +YP  IF RR+KYGVPV MS HP LN YI + L   + L+    VRKV + FF E  RA    +ER   DI
Sbjct:   26 SDILIEFLEVAVHNILYVRNIYPASIFVRRKKYGVPVQMSTHPYLNEYITECLKTIRDLLQKNEVRKVTLTFFDETQRA----IERFVFDI 112
[Close]
BLAST of mRNA_M-pyrifera_M_contig1029.614.1 vs. uniprot
Match: A0A6J1TAR1_FRAOC (mitotic spindle assembly checkpoint protein MAD2B n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1TAR1_FRAOC)

HSP 1 Score: 83.6 bits (205), Expect = 8.330e-16
Identity = 62/231 (26.84%), Postives = 106/231 (45.89%), Query Frame = 1 
Query:   34 ITEIVIDFMEAAAHTLLHARKVYPQDIFERRRKYGVPVWMSRHPDLNNYIFQVLLQAKSLIADGVVRKVCVCFFAEGGRADRTPVERIAVDIQIDGEXXXXXXXXXXXXDTRRRRDEDRSLDQTSLQEVEDQLRSALRQIQKSSAHLPTRQGCTFALHLQAHEESQVEERDHLEGHEGSSAVRS--ALRGGKWLLADIDEQGLIAEPGRRQLVPIKSVRGPGLRLDLSAEM 720
            I +I+++F+E + H LL  R +YP  IF  R+ Y +PV +S+HP LN YI + L  AK+L+    ++ + VCF+ +    +  P+ER   DI    E                    D     T L ++ D  R+   ++       P  + C+F +HLQ  E+             GS A+ +  A  G  W+  +  E+  I +P   QL P++++    +++ +  EM
Sbjct:   10 IVDILVEFLEVSIHHLLFLRNLYPPSIFVLRKMYNIPVQVSQHPGLNQYIIETLRSAKALLRSSHLKCLSVCFYND----NEIPIERFVFDILSIQENFRI----------------DHEFSDTYLVKLRDGFRAFCLKVAAIDMK-PLTENCSFQIHLQTTEQ-------------GSQALANDPAFEGFPWIELEATEKE-IPDP---QLAPLRTIESDFIKIQMYREM 202
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BLAST of mRNA_M-pyrifera_M_contig1029.614.1 vs. uniprot
Match: A0A4P9YCH2_ROZAC (DNA-binding protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YCH2_ROZAC)

HSP 1 Score: 80.1 bits (196), Expect = 1.020e-15
Identity = 35/86 (40.70%), Postives = 55/86 (63.95%), Query Frame = 1 
Query:   52 DFMEAAAHTLLHARKVYPQDIFERRRKYGVPVWMSRHPDLNNYIFQVLLQAKSLIADGVVRKVCVCFFAEGGRADRTPVERIAVDI 309
            DF E   HTLL+ R++YPQ++F++R+KY VPV+MSRHP+LN Y+  +LL  +  + D  +RK+ +    +      TP+E+    I
Sbjct:    6 DFFETVIHTLLYVRQIYPQNLFQKRKKYHVPVYMSRHPELNQYVLSILLALEPWLHDSKLRKLVLVVLDQD---TNTPIEKFVFQI 88
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1029.614.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLX5_9PHAE1.240e-9461.41HORMA domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835YLW3_9STRA5.960e-2633.62HORMA domain protein n=1 Tax=Tribonema minus TaxID... [more]
A0A7S1HTY5_9EUGL1.710e-1728.63Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A4D9CXK7_9STRA2.770e-1748.48HORMA domain-containing protein n=1 Tax=Nannochlor... [more]
W7TK13_9STRA2.890e-1747.87Mad2 mitotic arrest deficient-like 2 n=1 Tax=Nanno... [more]
A0A067R4L3_ZOONE4.870e-1749.45Mitotic spindle assembly checkpoint protein MAD2B ... [more]
A0A2J7QN68_9NEOP6.000e-1750.55Mitotic spindle assembly checkpoint protein MAD2B ... [more]
A0A6L2PS37_COPFO4.100e-1647.25HORMA domain-containing protein n=1 Tax=Coptoterme... [more]
A0A6J1TAR1_FRAOC8.330e-1626.84mitotic spindle assembly checkpoint protein MAD2B ... [more]
A0A4P9YCH2_ROZAC1.020e-1540.70DNA-binding protein n=1 Tax=Rozella allomycis (str... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1029contigM-pyrifera_M_contig1029:21104..25277 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score282.7
Seed ortholog evalue1.6e-73
Seed eggNOG ortholog2880.D7FJL0
Preferred nameMAD2L2
KEGG koko:K02537,ko:K03508,ko:K13728
KEGG Pathwayko01100,ko03460,ko04110,ko04111,ko04113,ko04114,ko04914,ko05100,ko05131,ko05166,map01100,map03460,map04110,map04111,map04113,map04114,map04914,map05100,map05131,map05166
KEGG ModuleM00293
Hectar predicted targeting categoryother localisation
GOsGO:0000002,GO:0000018,GO:0000075,GO:0000122,GO:0000228,GO:0000278,GO:0000724,GO:0000725,GO:0000731,GO:0001085,GO:0001102,GO:0001558,GO:0001932,GO:0001934,GO:0002637,GO:0002639,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002703,GO:0002705,GO:0002706,GO:0002708,GO:0002712,GO:0002714,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0002889,GO:0002891,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006301,GO:0006302,GO:0006310,GO:0006355,GO:0006357,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007005,GO:0007010,GO:0007015,GO:0007049,GO:0007088,GO:0007093,GO:0007094,GO:0007154,GO:0007162,GO:0007165,GO:0007346,GO:0008134,GO:0008150,GO:0008152,GO:0008432,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009968,GO:0009987,GO:0010224,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010569,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0010646,GO:0010648,GO:0010717,GO:0010719,GO:0010944,GO:0010948,GO:0010965,GO:0015630,GO:0016035,GO:0016043,GO:0016740,GO:0016772,GO:0016779,GO:0017125,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019899,GO:0019900,GO:0019901,GO:0019985,GO:0022402,GO:0022407,GO:0022408,GO:0023051,GO:0023052,GO:0023057,GO:0030029,GO:0030036,GO:0030071,GO:0030111,GO:0030155,GO:0030178,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031577,GO:0031974,GO:0031981,GO:0032042,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033135,GO:0033138,GO:0033554,GO:0033613,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0035861,GO:0040008,GO:0042176,GO:0042177,GO:0042276,GO:0042325,GO:0042327,GO:0042575,GO:0042770,GO:0042772,GO:0043085,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043392,GO:0043433,GO:0043504,GO:0043596,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0045191,GO:0045595,GO:0045596,GO:0045738,GO:0045739,GO:0045786,GO:0045830,GO:0045839,GO:0045841,GO:0045892,GO:0045893,GO:0045910,GO:0045911,GO:0045930,GO:0045934,GO:0045935,GO:0045937,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050864,GO:0050865,GO:0050867,GO:0050871,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051090,GO:0051093,GO:0051094,GO:0051098,GO:0051100,GO:0051101,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051251,GO:0051252,GO:0051253,GO:0051254,GO:0051338,GO:0051339,GO:0051348,GO:0051349,GO:0051438,GO:0051444,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060255,GO:0060828,GO:0061695,GO:0065007,GO:0065009,GO:0070013,GO:0070987,GO:0071173,GO:0071174,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0080134,GO:0080135,GO:0090090,GO:0090304,GO:0090734,GO:0097435,GO:1901360,GO:1901362,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902494,GO:1902679,GO:1902680,GO:1903047,GO:1903320,GO:1903321,GO:1903506,GO:1903507,GO:1903508,GO:1904666,GO:1904667,GO:1905818,GO:1905819,GO:1990234,GO:2000026,GO:2000042,GO:2000047,GO:2000048,GO:2000112,GO:2000113,GO:2000677,GO:2000678,GO:2000779,GO:2000780,GO:2000781,GO:2000816,GO:2001020,GO:2001021,GO:2001022,GO:2001032,GO:2001034,GO:2001141,GO:2001251
EggNOG free text desc.negative regulation of ubiquitin protein ligase activity
EggNOG OGsKOG3186@1,KOG3186@2759
Ec32 ortholog descriptionHORMA domain protein
Ec32 orthologEc-04_006500.1
EC2.7.7.7
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03036,ko03400
Exons5
Model size795
Cds size741
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1029.614.1prot_M-pyrifera_M_contig1029.614.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1029 21158..25277 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815533.3351939-UTR-M-pyrifera_M_contig1029:21103..211571622815533.3351939-UTR-M-pyrifera_M_contig1029:21103..21157Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1029 21104..21157 -
1692277452.6847951-UTR-M-pyrifera_M_contig1029:21103..211571692277452.6847951-UTR-M-pyrifera_M_contig1029:21103..21157Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1029 21104..21157 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815533.3504806-CDS-M-pyrifera_M_contig1029:21157..213431622815533.3504806-CDS-M-pyrifera_M_contig1029:21157..21343Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1029 21158..21343 -
1692277452.700116-CDS-M-pyrifera_M_contig1029:21157..213431692277452.700116-CDS-M-pyrifera_M_contig1029:21157..21343Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1029 21158..21343 -
1622815533.3617008-CDS-M-pyrifera_M_contig1029:22071..222121622815533.3617008-CDS-M-pyrifera_M_contig1029:22071..22212Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1029 22072..22212 -
1692277452.7121222-CDS-M-pyrifera_M_contig1029:22071..222121692277452.7121222-CDS-M-pyrifera_M_contig1029:22071..22212Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1029 22072..22212 -
1622815533.3737671-CDS-M-pyrifera_M_contig1029:24092..243171622815533.3737671-CDS-M-pyrifera_M_contig1029:24092..24317Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1029 24093..24317 -
1692277452.7212825-CDS-M-pyrifera_M_contig1029:24092..243171692277452.7212825-CDS-M-pyrifera_M_contig1029:24092..24317Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1029 24093..24317 -
1622815533.558712-CDS-M-pyrifera_M_contig1029:24780..248601622815533.558712-CDS-M-pyrifera_M_contig1029:24780..24860Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1029 24781..24860 -
1692277452.729436-CDS-M-pyrifera_M_contig1029:24780..248601692277452.729436-CDS-M-pyrifera_M_contig1029:24780..24860Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1029 24781..24860 -
1622815533.572274-CDS-M-pyrifera_M_contig1029:25168..252771622815533.572274-CDS-M-pyrifera_M_contig1029:25168..25277Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1029 25169..25277 -
1692277452.7400224-CDS-M-pyrifera_M_contig1029:25168..252771692277452.7400224-CDS-M-pyrifera_M_contig1029:25168..25277Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1029 25169..25277 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1029.614.1

>prot_M-pyrifera_M_contig1029.614.1 ID=prot_M-pyrifera_M_contig1029.614.1|Name=mRNA_M-pyrifera_M_contig1029.614.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=247bp
MDATRQTWNEAITEIVIDFMEAAAHTLLHARKVYPQDIFERRRKYGVPVW
MSRHPDLNNYIFQVLLQAKSLIADGVVRKVCVCFFAEGGRADRTPVERIA
VDIQIDGENDGRTDQGSDEGDTRRRRDEDRSLDQTSLQEVEDQLRSALRQ
IQKSSAHLPTRQGCTFALHLQAHEESQVEERDHLEGHEGSSAVRSALRGG
KWLLADIDEQGLIAEPGRRQLVPIKSVRGPGLRLDLSAEMGDCPRI*
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mRNA from alignment at M-pyrifera_M_contig1029:21104..25277-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1029.614.1 ID=mRNA_M-pyrifera_M_contig1029.614.1|Name=mRNA_M-pyrifera_M_contig1029.614.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4174bp|location=Sequence derived from alignment at M-pyrifera_M_contig1029:21104..25277- (Macrocystis pyrifera P11B4 male)
ATGGATGCCACACGTCAAACCTGGAATGAGGCTATCACCGAGATTGTTAT
AGACTTCATGGAGGCTGCAGCGCACACCCTGCTGCATGCCAGAAAAGTCT
ACCCGCAAGGTATTATTTCGTTTTTGAATATTTGAATCGTCGAATCGTGG
TCCACTCTGTGGGATTGTTCGGCTGTGAGGAAGAAGCATGCTGTGTACTG
CTGTTTTTCACCTTGTGTTGCCTCAAGCAGCATCACAAGTATCTATGACT
ATAAGTGTGGACAGGGCTTTCCTCTCGCTCCCCGGGGCGCGAAAAAAAAA
GAAAAAAGTATGATGACATTGCCGCTATCCCAGTGTTTGTTGAACGGGCT
AAAAATAACGGACCTCTATACGTACCTGTCTGGTGTTTTGTCCACTTCCT
CCTTGACCCGTTACAAGACATCTTCGAACGTCGGCGGAAGTATGGTGTGC
CCGTGTGGATGAGCCGACATCCGGACTTAAATAACTACATTTTCCAGGTG
AGTTGCCGTTCTGTCTCATGTAAGCCTGTATAAAGCCTGTCAGCAGACAC
ACACCCATGAGATACGTTAAGATATAATACAGGGGTAAGGAGCATTCCCT
AGAAGCTGCTCAAAACTACTGTACTGTACCTACTCCTGTAAGGTTCGGAA
CGAGACGAGTTGATGTCACACATGAGTTTCACGAGAAAGAAGACACATAA
GCTGACGGACCTACTGCACTAGCGAATTGCTGTATTGTCACACCAAACCA
GACAGCAGACAAGAGACTATCATATCAGGTATATCAGGCTACTGTTATCG
AGGTGTGAAACACGTGCCAGATGCAGCGAAAGATGTACGGGACCCTCTAC
CCTGTACCCTCTGTGTTGATGCAGTACTGGTTGGTGTTGTAGGCATCCTG
GTACCCATCATCTACGATAATTATTCTGGTATTCGATTCCCCGTTTGCTT
GCTGGACAAGGTTCTCCTTCAAGCGAAGTCACTCATTGCCGACGGGGTCG
TTCGGAAGGTGTGTGTTTGTTTTTTCGCCGAAGGCGGACGTGCAGACCGG
ACTCCTGTGGAACGAATCGCTGTTGACATTCAAATCGACGGAGAAAACGA
TGGCCGAACAGATCAAGGCAGCGATGAAGGGGATACCCGTAGGCGAAGAG
ACGAGGACCGCTCCCTGGACCAAACTAGCTTGCAGGTTAGAGCCGCTGCG
TTGTTGAAAGCCTAACGTATCTACAGTACTATCTATCCAGTTGTATCAGG
AACTCACACCCGGCTGCGTGCCGGTATAACTGCCTGCGAGGTGGACATTG
TTGTGCACGCATTATGGACACCAAGAGATCACCCATCAGCAATGACCGCT
TTGAATATCGAAAGTGACCCAGTACGTAAGTTCTCCGTGTGTGCCATCAT
GTAATGGTCAACATTTGTGTTGTTTTTCTTCGTACGCAATTTATTTCTAT
ACCAGGTACTGAGGTCCGGCCCTAACGAGGACAAACAAAATAAACGAACC
GACTTTCGTTTTTTGTAAAAAACAGCAGGTTGAGTCCTAACGAGAAAAAA
AAAAACGAAACAAAAAGAAGCCGAGTCGAATTTTTACGGGGTGCAATTTT
TCAGAATGACTCAACCGCTACAGCACGTGATTCCCGGCGATAGCGCTCGA
CAGCGACGGTGGATAGACACAACTCGCACACGTGAGGCACCCTCCACAGC
AGATGGTTCTTGTGGTCCAACACGCTCCCTCCGGAGTGCTCCAGAACATG
TGTATCGGTCATCGCTGTTCGATGGCAGATGTTGGAATATTGAGTGGGAT
TCATGTCGAAAAATTTACCGTCACAGCCACCTTCTGATCCCCCGGTTTCT
TGCGAGGGCACCCCATGGTGATTCCCTACCCATATATATGCCCGCACCGT
CAGCAGACAAGCCGCGTGGCAGCCACATGCACTACCTCGGCCATCGTGCG
CTTGCCAACTCGTCGTAGAAACTTTACCGGAACTCCATCCGAACGCTTCG
AGCTCCTCCTATGTTCCTCTTCGACCCTGGGTAAACAAATTTCGTTTATT
TGGCACCCATTTCGTTTTTTTTCAAGTCCCAGAGGAAACGTGAAAACGAA
GGAATCAGGATCTCTATTTCTATTTTTATATTTTGACCAATAAAACTCAC
GTGTTCTTTAGTTCTGCGCTTCTTTTTTTTTTCGTTTTTTTTGCCCCCGT
TAGGACCGTCCCCGAGGGCGTGTCTAAACAGAACCGAAAGTCGAAATGAT
GGTAAACAAGGCGCTGATTGGTCCCTGGCCCGAACATGTTCCCCTTCGTT
TTTTTGGTTCCGAGAAAATGAACGGTTTACAACCCAATGCCAAAATCCGA
AAGTCGACGGCTGGAAATCGAAAAGCAAATCGAAAAAACGAACAGCAACA
ATTCAGCGCATTCTACTGCTCAGCGCAGCCACGTTAAAATATCACATCAG
GACCGCCGTACACAGCATCCAGCCCACATCTAGCACGGCAACACAGCCGC
ACAGACCCCCCGTAAACAGCCAGCAGGCGAACCACAACACCAGCCCCGAA
GTTCTCGGGCCTTTATTTCCCGACGTTCGAGCCAGAGCGAACATAGTTTG
AGGAAAATTCAGGATGATACCCTCGAGAACGAGATCGCATATTCGTTCTT
AGTATAATTTCAAGTTTGATACCGGGGCGTCAACGTTGGACGCGCGACCA
CCTCCATGGGAGGCTCAACGACGTCCCGAAATCGAATTGCCGTGGCGTTT
GCCTGCTTCTGTGGTGGACCTGTGTTGCCGAGCGCTAGATTGCCGGAATG
TGTGCACAGTTGCGAACGGCGCAAGTAGGTTGTGCTCTCCGTTGCTTTTC
GCCTGGATTTCTTCTTTCACTTTTCGATTCTGTTCGGACACCTCGGCTAA
TTTTTGTCGAAATCGAAATGAATTCGATTGTCGCTTTCGCTTTTCGATTC
CGTTTGGACGCGCCCTGATATGGTTCAACACGCCATAGGTTTCCTCATTC
GCCAGGCACACCAAATCTGACCATACGGTACGTTTTTTTCGCAAACATCA
AAATAACCACGGCAGGAGGTTGAAGATCAGCTCCGATCCGCGCTTCGCCA
GATTCAGAAGTCGTCAGCACATCTGCCCACGCGTCAAGGGTGTACGTTCG
CCTTGCACTTACAAGCCCACGAGGAAAGTCAAGTCGAAGAGCGCGACCAC
TTAGAGGTGCGTTGCGAGTCTTTAGTTGCCTTTGATATTACTTCGATCTC
ATGGATGATGGATATGCGGAGAAGTATTCGCTCCGATCATACACCGATTA
GACTGCGGAGGGAATTATGGCTATTAGACACTACCAGGTATTATTTATAG
ACACTATTAGAGACTATTAATAGTAGCTAAAGCTGTGAGGCAGAAGATGT
GTAACACGGCCAGTAGGCTAACCCTACGTAAGGTTCTCGTATCACGGAAG
CAGTTTCAGCTCATGTTTTACATTTAATGCAAAGCGGATGTTGTGTGTTA
TTGCAACAGTGTATACTAATAGTGCATACCTGTACGAGTGCATTGAGCAG
GAGTGGAACGGCGGGGGGCTGGGGAAGCAGCAAGAGGTACAACACATTGC
TGGCAGCTTGCTCGGTTTGAATATTGGAAACATTATATTAATAGTAATAG
CAATATGATAGCACCACAACGCCAGTGAAGGTAAAAACTTGTTCCGTGCA
ACCCGAAACGACTCAGATGAGCCGACTATCGATTAAGAAGTACCTGGGAA
CGATTATCGATGAAGGACGAACGTTAATAAAATGAGTAAGGAGGATGCGG
ATGTTTTGTTGTCGTCTCGCGCGACGACCGACGACTGCACGTGCCGTTCA
TGCCGCCCTTCTTTTGATTATTATTAATACCATAGGAATGTTGCTGATAA
TAGTACGCTATTGATCCCTTTTCCTTGCCTACAGGGTCATGAGGGATCTT
CAGCGGTAAGGTCGGCGCTTAGAGGGGGGAAGTGGCTGCTTGCCGACATC
GATGAGCAAGGCTTGATCGCAGAGCCAGGACGACGACAGCTGGTGCCGAT
CAAATCCGTGCGCGGCCCGGGCTTGAGACTTGACTTGTCGGCAGAGATGG
GAGATTGCCCTCGTATCTAGTGAATGTCACTGTAATGTGCAGTCGTGAGA
TTATGATATTTGCTAAGAGATCAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1029:21104..25277-

>mRNA_M-pyrifera_M_contig1029.614.1 ID=mRNA_M-pyrifera_M_contig1029.614.1|Name=mRNA_M-pyrifera_M_contig1029.614.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1482bp|location=Sequence derived from alignment at M-pyrifera_M_contig1029:21104..25277- (Macrocystis pyrifera P11B4 male)
ATGGATGCCACACGTCAAACCTGGAATGAGGCTATCACCGAGATTGTTAT
AGACTTCATGGAGGCTGCAGCGCACACCCTGCTGCATGCCAGAAAAGTCT
ACCCGCAAGATGGATGCCACACGTCAAACCTGGAATGAGGCTATCACCGA
GATTGTTATAGACTTCATGGAGGCTGCAGCGCACACCCTGCTGCATGCCA
GAAAAGTCTACCCGCAAGACATCTTCGAACGTCGGCGGAAGTATGGTGTG
CCCGTGTGGATGAGCCGACATCCGGACTTAAATAACTACATTTTCCAGAC
ATCTTCGAACGTCGGCGGAAGTATGGTGTGCCCGTGTGGATGAGCCGACA
TCCGGACTTAAATAACTACATTTTCCAGGTTCTCCTTCAAGCGAAGTCAC
TCATTGCCGACGGGGTCGTTCGGAAGGTGTGTGTTTGTTTTTTCGCCGAA
GGCGGACGTGCAGACCGGACTCCTGTGGAACGAATCGCTGTTGACATTCA
AATCGACGGAGAAAACGATGGCCGAACAGATCAAGGCAGCGATGAAGGGG
ATACCCGTAGGCGAAGAGACGAGGACCGCTCCCTGGACCAAACTAGCTTG
CAGGTTCTCCTTCAAGCGAAGTCACTCATTGCCGACGGGGTCGTTCGGAA
GGTGTGTGTTTGTTTTTTCGCCGAAGGCGGACGTGCAGACCGGACTCCTG
TGGAACGAATCGCTGTTGACATTCAAATCGACGGAGAAAACGATGGCCGA
ACAGATCAAGGCAGCGATGAAGGGGATACCCGTAGGCGAAGAGACGAGGA
CCGCTCCCTGGACCAAACTAGCTTGCAGGAGGTTGAAGATCAGCTCCGAT
CCGCGCTTCGCCAGATTCAGAAGTCGTCAGCACATCTGCCCACGCGTCAA
GGGTGTACGTTCGCCTTGCACTTACAAGCCCACGAGGAAAGTCAAGTCGA
AGAGCGCGACCACTTAGAGGAGGTTGAAGATCAGCTCCGATCCGCGCTTC
GCCAGATTCAGAAGTCGTCAGCACATCTGCCCACGCGTCAAGGGTGTACG
TTCGCCTTGCACTTACAAGCCCACGAGGAAAGTCAAGTCGAAGAGCGCGA
CCACTTAGAGGGTCATGAGGGATCTTCAGCGGTAAGGTCGGCGCTTAGAG
GGGGGAAGTGGCTGCTTGCCGACATCGATGAGCAAGGCTTGATCGCAGAG
CCAGGACGACGACAGCTGGTGCCGATCAAATCCGTGCGCGGCCCGGGCTT
GAGACTTGACTTGTCGGCAGAGATGGGAGATTGCCCTCGTATCTAGGGTC
ATGAGGGATCTTCAGCGGTAAGGTCGGCGCTTAGAGGGGGGAAGTGGCTG
CTTGCCGACATCGATGAGCAAGGCTTGATCGCAGAGCCAGGACGACGACA
GCTGGTGCCGATCAAATCCGTGCGCGGCCCGGGCTTGAGACTTGACTTGT
CGGCAGAGATGGGAGATTGCCCTCGTATCTAG
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