mRNA_M-pyrifera_M_contig102846.609.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102846.609.1 vs. uniprot
Match: A0A4Z0FCJ0_9GAMM (Flagellar hook-associated protein 1 n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A4Z0FCJ0_9GAMM) HSP 1 Score: 199 bits (505), Expect = 1.030e-56 Identity = 111/217 (51.15%), Postives = 150/217 (69.12%), Query Frame = 1 Query: 4 VTGAPAAGDVYLLQPTKSIARNMGVAITNPRELALARPNRTSADTANIGSGEISTPVVLDVTDANLLTTTRLVFNDPPTTYQVNGAGPLIPYTSGADIDINGWRVQVSGSPEPGDTFTVAANVGAAGDNGNGLALAELQLTKLLDGATATYQESYSQLVGRVGSKTQELELSRDAMSILRENAQASRDSLSAVNLDEEAAQLLRFQQAYTAAAQVIS 654 +TG PAAGD +L+QPT A ++ V I +PRELA A P RT A +N G+G I +V+D TD L+T + F P TTY +NG+G Y++ A I +NGW ++++G+P+ GD FTVA N G GDN N LALA LQ LLDG +ATY E Y ++VG V +++++ L RD +L + A+A+RD++S VNLDEEAAQ+LRFQQAY AAAQVI+ Sbjct: 394 LTGTPAAGDRFLIQPTAGGAASLRVVIDDPRELAAASPVRTRAALSNAGTGRIDAGLVVDPTDPALMTPVTIEFLTP-TTYSINGSGSFA-YSADAAIAMNGWEIRINGAPQAGDQFTVAPNSGGVGDNRNALALAGLQSQSLLDGGSATYGERYERVVGEVANRSRQAALGRDTQRLLVDQARAARDAVSGVNLDEEAAQMLRFQQAYQAAAQVIA 608
BLAST of mRNA_M-pyrifera_M_contig102846.609.1 vs. uniprot
Match: A0A433HZ30_9GAMM (Flagellar hook-associated protein 1 n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A433HZ30_9GAMM) HSP 1 Score: 187 bits (476), Expect = 1.930e-52 Identity = 107/215 (49.77%), Postives = 140/215 (65.12%), Query Frame = 1 Query: 7 TGAPAAGDVYLLQPTKSIARNMGVAITNPRELALARPNRTSADTANIGSGEISTPVVLDVTDANLLTTTRLVFNDPPTTYQVNGAGPLIPYTSGADIDINGWRVQVSGSPEPGDTFTVAANVGAAGDNGNGLALAELQLTKLLDGATATYQESYSQLVGRVGSKTQELELSRDAMSILRENAQASRDSLSAVNLDEEAAQLLRFQQAYTAAAQVI 651 +GAPAAGD +L+QPT+ +A + GV I + A A P +T+A +N G+G+IS LDVT+ANLLT + F D T Y VNG YTSGADIDINGWR+Q++G+P GD F +++N G GDN N L L ELQ K L +TYQ+ SQ+V VG++ + L+E A +RDS+S VNLDEEAA L+R+QQAY AAA+VI Sbjct: 405 SGAPAAGDRFLIQPTRLMATSFGVKIKDASLFAAAAPIKTAASQSNTGTGKISVGEALDVTNANLLTPVNIQFTDA-THYTVNGVASATTYTSGADIDINGWRIQLTGAPATGDQFQISSNAGGVGDNRNALKLNELQTGKKLLNGASTYQDVQSQMVSEVGAQGSSARNTLKTQEALQEQAVQARDSVSGVNLDEEAANLMRYQQAYEAAAKVI 618
BLAST of mRNA_M-pyrifera_M_contig102846.609.1 vs. uniprot
Match: UPI0019A8796C (Flagellar hook-associated protein FlgK n=1 Tax=Steroidobacteraceae bacterium TaxID=2689616 RepID=UPI0019A8796C) HSP 1 Score: 184 bits (466), Expect = 4.900e-51 Identity = 103/210 (49.05%), Postives = 140/210 (66.67%), Query Frame = 1 Query: 25 GDVYLLQPTKSIARNMGVAITNPRELALARPNRTSADTANIGSGEISTPVVLDVTDANLLTTTRLVFNDPPTTYQVNGAGPLIPYTSGADIDINGWRVQVSGSPEPGDTFTVAANVGAAGDNGNGLALAELQLTKLLDGATATYQESYSQLVGRVGSKTQELELSRDAMSILRENAQASRDSLSAVNLDEEAAQLLRFQQAYTAAAQVIS 654 GD Y++ PT+ R G+AIT+P +A A P R SA TAN GSG +S VLD T+ NLLTT +VF P T Y +NG GP YT+G +ID NGWRVQV+G+ GDTFTV +N GA GDN N LAL + +L+ T + + +L +G +T+ +++RD+ +++ + A+RD++S VNLDEEAA LLR+QQAY AAAQ+IS Sbjct: 406 GDQYVIHPTRDAIRGFGMAITDPSRVAAAAPIRGSAATANSGSGTVSAGEVLDSTNVNLLTTANIVFTSP-TQYTING-GPAQAYTAGGNIDFNGWRVQVNGTAATGDTFTVRSNAGATGDNRNVLALGDAMRAGVLENGTISVASAVERLTADMGLQTRTAQVNRDSEAVVNADNLAARDAVSGVNLDEEAANLLRYQQAYQAAAQIIS 613
BLAST of mRNA_M-pyrifera_M_contig102846.609.1 vs. uniprot
Match: A0A7C3CXA8_9GAMM (Flagellar hook-associated protein 1 (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C3CXA8_9GAMM) HSP 1 Score: 180 bits (457), Expect = 8.420e-51 Identity = 105/220 (47.73%), Postives = 148/220 (67.27%), Query Frame = 1 Query: 7 TGAPAAGDVYLLQPTKSIARNMGVAITNPRELALARPNRTSADTANIGSGEISTPVVLDVTDANLLTTTRLVFNDPPTTYQ----VNGAGPLIPYTSGADIDINGWRVQVSGSPEPGDTFTVAANVGAAGDNGNGLALAELQLTKLLDGATATYQESYSQLVGRVGSKTQELELSRDAMSILRENAQASRDSLSAVNLDEEAAQLLRFQQAYTAAAQVIS 654 TG+PAAGD++L+QPT + A+N+ ++I+N ++A A P R+ ++ NIG G I+TP +LD T+ +L + F P T Y+ V+G YTS DID+NG R+Q++GSP GD+FT+ N G + DN N L+ELQL K+++G AT QE YS +V VG T++ + RDA + L NA+A RDS+S VNLDEEAA L ++QQAY AAAQVI+ Sbjct: 248 TGSPAAGDMFLIQPTINGAKNIELSISNGSQIAAASPMRSLSNLNNIGDGAITTPQILDETNPDLRNPLNIKFTSP-TDYEITDTVSGNTTTGSYTSNGDIDVNGLRIQITGSPAAGDSFTIDKNEGGSADNSNSRLLSELQLKKVVEG-NATLQEGYSMIVNDVGGITRQTGIYRDAQNTLLANAEAMRDSISGVNLDEEAANLAKYQQAYQAAAQVIA 465
BLAST of mRNA_M-pyrifera_M_contig102846.609.1 vs. uniprot
Match: A0A521RGZ6_9GAMM (Flagellar hook-associated protein 1 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RGZ6_9GAMM) HSP 1 Score: 182 bits (461), Expect = 2.540e-50 Identity = 103/215 (47.91%), Postives = 139/215 (64.65%), Query Frame = 1 Query: 10 GAPAAGDVYLLQPTKSIARNMGVAITNPRELALARPNRTSADTANIGSGEISTPVVLDVTDANLLTTTRLVFNDPPTTYQVNGAGPLIPYTSGADIDINGWRVQVSGSPEPGDTFTVAANVGAAGDNGNGLALAELQLTKLLDGATATYQESYSQLVGRVGSKTQELELSRDAMSILRENAQASRDSLSAVNLDEEAAQLLRFQQAYTAAAQVIS 654 GAP + A + +++ R++A A P RT+A+ N+G IS V D T+ LLTT LVF + YQVNGAGPLIPY SGA+ID+NGWRVQ++G+P GD+F V N G +GDN N LALA+ Q LL T++Y+ +Y QLV VG++ E++ +A +R+ A A+R+S++ VNLDEEAA L+RFQQ Y AAAQVIS Sbjct: 399 GAPVXXXXXXXXXXXTSAATLRPLLSSARQVAAAAPIRTAANIGNLGDAAISAGEVQDATNPALLTTVTLVFANAAN-YQVNGAGPLIPYVSGANIDLNGWRVQITGTPAAGDSFKVEKNTGGSGDNRNALALADQQSANLLHNGTSSYEGAYGQLVATVGTRAHSAEINLNAQRAIRDQAVAARESVAGVNLDEEAANLVRFQQIYQAAAQVIS 612
BLAST of mRNA_M-pyrifera_M_contig102846.609.1 vs. uniprot
Match: A0A3A4VYG4_9GAMM (Flagellar hook-associated protein 1 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3A4VYG4_9GAMM) HSP 1 Score: 181 bits (458), Expect = 7.520e-50 Identity = 102/219 (46.58%), Postives = 138/219 (63.01%), Query Frame = 1 Query: 7 TGAPAAGDVYLLQPTKSIARNMGVAITNPRELALARPNRTSADTANIGSGEISTPVVLDVTDANLLTTTRLVFNDPPTTYQVNGAGP---LIPYTSGADIDINGWRVQVSGSPEPGDTFTVAANVGAAGDNGNGLALAELQLTKLLDGATATYQESYSQLVGRVGSKTQELELSRDAMSILRENAQASRDSLSAVNLDEEAAQLLRFQQAYTAAAQVIS 654 +GA GD +L+QPT++ A + VA+ + R +A A P R+SA AN G IS +LD T + LL T + FN+PP T+ V G P + YTSG +ID+NGWR+Q++G+P+ GD+FTV N DN N L LA L+ L G A+YQ++Y QLV VGS T + ++ R A + +RD+ S VNL+EEAA L+RFQQAY AAAQVIS Sbjct: 401 SGALNVGDRFLIQPTRNGAAGINVAVRDTRLIAAAAPVRSSAALANTGGATISAGEILDSTHSALLNTVTITFNNPPATFTVTGVAPDPSPLAYTSGGNIDLNGWRIQITGAPQAGDSFTVERNTSGVSDNRNALLLAGLRTQLTLAGGNASYQDAYGQLVADVGSSTHQADIGRKAQETQLAQVKNARDATSGVNLEEEAADLVRFQQAYQAAAQVIS 619
BLAST of mRNA_M-pyrifera_M_contig102846.609.1 vs. uniprot
Match: A0A351MFU0_9GAMM (Flagellar hook-associated protein 1 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A351MFU0_9GAMM) HSP 1 Score: 180 bits (457), Expect = 9.800e-50 Identity = 103/217 (47.47%), Postives = 143/217 (65.90%), Query Frame = 1 Query: 1 TVTGAPAAGDVYLLQPTKSIARNMGVAITNPRELALARPNRTSADTANIGSGEISTPVVLDVTDANLLTTTRLVFNDPPTTYQVNGAGPLIPYTSGADIDINGWRVQVSGSPEPGDTFTVAANVGAAGDNGNGLALAELQLTKLLDGATATYQESYSQLVGRVGSKTQELELSRDAMSILRENAQASRDSLSAVNLDEEAAQLLRFQQAYTAAAQVI 651 TV PAAGD + L PT A + P ELA+A P T+ ++N+G IS VLD + +LL T +VF D PT+YQVNG GP + + SGA+ID+NGWRVQV+G+P GDTFTV+ N+G A D N + + EL+ ++LD T+T+ E+Y+ V R GS+ ++ E+++ A+ + E + A + +S VNLDEEAA L+RFQQAY AAAQVI Sbjct: 398 TVGIPPAAGDRWRLSPTLGAAEGLTSVGLRPSELAMALPVITTQGSSNVGDARISGGEVLDPSAPSLLATVNIVF-DSPTSYQVNGVGPSLAFASGANIDLNGWRVQVTGTPRIGDTFTVSQNMGGASDARNAVNMIELERRRILDNGTSTFSEAYAGTVSRNGSRQRQGEIAQRALETVLERSVARQQEVSGVNLDEEAANLMRFQQAYQAAAQVI 613
BLAST of mRNA_M-pyrifera_M_contig102846.609.1 vs. uniprot
Match: A0A849GQP3_9GAMM (Flagellar hook-associated protein 1 n=1 Tax=Woeseia sp. TaxID=1980636 RepID=A0A849GQP3_9GAMM) HSP 1 Score: 180 bits (456), Expect = 1.360e-49 Identity = 109/215 (50.70%), Postives = 141/215 (65.58%), Query Frame = 1 Query: 10 GAPAAGDVYLLQPTKSIARNMGVAITNPRELALARPNRTSADTANIGSGEISTPVVLDVTDANLLTTTRLVFNDPPTTYQVNGAGPLIPYTSGADIDINGWRVQVSGSPEPGDTFTVAANVGAAGDNGNGLALAELQLTKLLDGATATYQESYSQLVGRVGSKTQELELSRDAMSILRENAQASRDSLSAVNLDEEAAQLLRFQQAYTAAAQVIS 654 G+PAAGD L++PT A + AIT+P+ LA+A P RT+A NIGSG IS V+D DA LLT++ + F +TY +NGAG Y SG I ING +SG P GD FT+ AN A+GDN NGL LA LQ +LDG T + ESY QLV VGS T++++ + +A S++ NA+ ++ + S VNLDEEAA LLRFQQ+Y A AQVIS Sbjct: 402 GSPAAGDRLLIRPTIGGAAGISRAITDPQSLAMAAPTRTTASLDNIGSGTISPSAVVDRADAGLLTSSVIEFTGA-STYSINGAGTFS-YASGDAITINGSEFTISGEPSIGDQFTIEANSAASGDNRNGLQLANLQAVGILDGGTISINESYGQLVTNVGSTTRQVKANLEAQSVVLANAENAQLAKSGVNLDEEAANLLRFQQSYQAVAQVIS 614
BLAST of mRNA_M-pyrifera_M_contig102846.609.1 vs. uniprot
Match: A0A2N2TMK9_9PROT (Flagellar hook-associated protein 1 n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-14 TaxID=2013705 RepID=A0A2N2TMK9_9PROT) HSP 1 Score: 179 bits (453), Expect = 4.230e-49 Identity = 102/220 (46.36%), Postives = 143/220 (65.00%), Query Frame = 1 Query: 10 GAPAAGDVYLLQPTKSIARNMGVAITNPRELALARPNRTSADTANIGSGEISTPVVLDV--TDANLLTTTRLVFNDPPTTYQVNGAGPLIP----YTSGADIDINGWRVQVSGSPEPGDTFTVAANVGAAGDNGNGLALAELQLTKLLDGATATYQESYSQLVGRVGSKTQELELSRDAMSILRENAQASRDSLSAVNLDEEAAQLLRFQQAYTAAAQVI 651 GA AGD +L+QPT++ A N+ VA+T+ R +A A P R+SA T+N G+G IS V +ANL T + F++PPTT+ VNG G P YT+G I NGW +Q+SG+P GD FTV+AN DN N L LA LQ K L G +A+YQ +Y+Q+V VG+K +E++++ A + + A ++ +LS VNLDEEAA LLR+QQAY A+ ++I Sbjct: 406 GAANAGDSFLIQPTRTAAGNIAVALTDARSIAAAAPIRSSASTSNTGTGAISAGSVNGPPPVNANLAQTVTITFDNPPTTFDVNGVGTGNPANVAYTAGGSITYNGWTIQISGTPVAGDVFTVSANSAGVSDNRNALLLAGLQTAKALAGGSASYQSAYAQIVSDVGNKAREVQVTATAQENILKQANEAQQALSGVNLDEEAANLLRYQQAYQASGKMI 625
BLAST of mRNA_M-pyrifera_M_contig102846.609.1 vs. uniprot
Match: UPI001BC2D8A2 (Flagellar hook-associated protein FlgK n=1 Tax=Sulfuritalea sp. TaxID=2480090 RepID=UPI001BC2D8A2) HSP 1 Score: 177 bits (448), Expect = 5.850e-49 Identity = 98/197 (49.75%), Postives = 130/197 (65.99%), Query Frame = 1 Query: 61 ARNMGVAITNPRELALARPNRTSADTANIGSGEISTPVVLDVTDANLLTTTRLVFNDPPTTYQVNGAGPLIPYTSGADIDINGWRVQVSGSPEPGDTFTVAANVGAAGDNGNGLALAELQLTKLLDGATATYQESYSQLVGRVGSKTQELELSRDAMSILRENAQASRDSLSAVNLDEEAAQLLRFQQAYTAAAQVI 651 A ++ +AI +PR++ALA P RT+ N G+G IS + LD T+ NL TTT L F YQ+NGAGP+I + GA+ID NGWRV VSG+P GD FT+ N DN N + L LQ + G TATYQ +YS LV ++G++ +E+E++ A L + AQ +RD +S VNLDEEAA LLR+QQAY AAA+VI Sbjct: 338 AGDLALAIASPRDIALAAPIRTATPLTNTGTGSISAGIALDATNPNLWTTTTLNFVAGG--YQINGAGPVIAHAPGANIDHNGWRVVVSGTPAAGDVFTIERNSAGVADNRNAMLLGALQTANTMAGGTATYQSAYSTLVAQIGNRAREVEITGQAQQSLLQQAQTARDRMSGVNLDEEAANLLRYQQAYQAAAKVI 532 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102846.609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102846.609.1 >prot_M-pyrifera_M_contig102846.609.1 ID=prot_M-pyrifera_M_contig102846.609.1|Name=mRNA_M-pyrifera_M_contig102846.609.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=218bp TVTGAPAAGDVYLLQPTKSIARNMGVAITNPRELALARPNRTSADTANIGback to top mRNA from alignment at M-pyrifera_M_contig102846:3..656- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102846.609.1 ID=mRNA_M-pyrifera_M_contig102846.609.1|Name=mRNA_M-pyrifera_M_contig102846.609.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig102846:3..656- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102846:3..656- >mRNA_M-pyrifera_M_contig102846.609.1 ID=mRNA_M-pyrifera_M_contig102846.609.1|Name=mRNA_M-pyrifera_M_contig102846.609.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1308bp|location=Sequence derived from alignment at M-pyrifera_M_contig102846:3..656- (Macrocystis pyrifera P11B4 male)back to top |