mRNA_M-pyrifera_M_contig102822.602.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102822.602.1 vs. uniprot
Match: A0A6B1AYW6_9ACTN (Betaine/proline/choline family ABC transporter ATP-binding protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AYW6_9ACTN) HSP 1 Score: 244 bits (624), Expect = 2.590e-77 Identity = 123/167 (73.65%), Postives = 135/167 (80.84%), Query Frame = 1 Query: 1 CIMKDGEVVQIGTPEEILTQPATGYVAEFVQDVDQGRVIEVHEIMQPPAPVDRSADLTTALRGLEDRAGAFVLDDGGRPVALLTAADGIRAGSMGSTEVDAALRSDFEQCPPTATLNEVYAAAGRGLPIAVVDDDGVMVGNVDPRHIMEEMGRVEQLIDQFEREVFM 501 CIMKDG VVQIGTPEEILTQPATGYVAEFVQDVDQGRVI+VHE+MQ PAPV L AL + DR+GAFV+DD G P LLT+ DGIRA SMG+ EV ALRSDF++C P+ LN VYAAAGRGLPIAV DD G +VGN+DP IMEEMGRVE LID FEREVFM Sbjct: 241 CIMKDGAVVQIGTPEEILTQPATGYVAEFVQDVDQGRVIQVHEVMQQPAPVSTDVSLAEALSKIGDRSGAFVVDDSGSPTHLLTSEDGIRAASMGTAEVTPALRSDFDRCAPSDCLNTVYAAAGRGLPIAVCDDSGALVGNLDPTQIMEEMGRVEHLIDHFEREVFM 407
BLAST of mRNA_M-pyrifera_M_contig102822.602.1 vs. uniprot
Match: A0A6B0WKU8_9ACTN (Betaine/proline/choline family ABC transporter ATP-binding protein n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WKU8_9ACTN) HSP 1 Score: 243 bits (620), Expect = 9.550e-77 Identity = 124/167 (74.25%), Postives = 137/167 (82.04%), Query Frame = 1 Query: 1 CIMKDGEVVQIGTPEEILTQPATGYVAEFVQDVDQGRVIEVHEIMQPPAPVDRSADLTTALRGLEDRAGAFVLDDGGRPVALLTAADGIRAGSMGSTEVDAALRSDFEQCPPTATLNEVYAAAGRGLPIAVVDDDGVMVGNVDPRHIMEEMGRVEQLIDQFEREVFM 501 CIMKDG VVQIGTPEEILT+PATGYVAEFVQDVDQGRVI+VHEIMQ PAPV A L AL L +R+GAFVLD G P LLTA DGIRA +MG+T++ ALR+DF++C P LN VYAAAGRGLPIAV DD G +VGN+DPRHIMEEMGRVE LID FEREVFM Sbjct: 238 CIMKDGAVVQIGTPEEILTEPATGYVAEFVQDVDQGRVIQVHEIMQQPAPVSAGATLAEALGTLGERSGAFVLDSAGAPSHLLTADDGIRAANMGTTDLGPALRTDFDRCGPEDCLNTVYAAAGRGLPIAVCDDSGNLVGNLDPRHIMEEMGRVEHLIDDFEREVFM 404
BLAST of mRNA_M-pyrifera_M_contig102822.602.1 vs. uniprot
Match: A0A3D0TP50_9ACTN (ABC transporter ATP-binding protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D0TP50_9ACTN) HSP 1 Score: 243 bits (619), Expect = 3.350e-76 Identity = 123/167 (73.65%), Postives = 140/167 (83.83%), Query Frame = 1 Query: 1 CIMKDGEVVQIGTPEEILTQPATGYVAEFVQDVDQGRVIEVHEIMQPPAPVDRSADLTTALRGLEDRAGAFVLDDGGRPVALLTAADGIRAGSMGSTEVDAALRSDFEQCPPTATLNEVYAAAGRGLPIAVVDDDGVMVGNVDPRHIMEEMGRVEQLIDQFEREVFM 501 CIMKDG VVQIGTPEEILT+PATGYVAEFV+DVDQGRVI V ++M PP P+ R L AL ++D AG FV+DD GRP+ALLT+ADG+RA MGS +D+ALRSDFEQ ATLNE+YAAAGRGL +AVVDDDGV+VGN+DPR IMEEMGRVEQLID FEREVFM Sbjct: 271 CIMKDGAVVQIGTPEEILTEPATGYVAEFVKDVDQGRVITVADVMTPPDPIVREQSLRAALAQVDDAAGRFVVDDRGRPIALLTSADGLRAMEMGSDSLDSALRSDFEQTSSEATLNELYAAAGRGLSVAVVDDDGVLVGNLDPRLIMEEMGRVEQLIDGFEREVFM 437
BLAST of mRNA_M-pyrifera_M_contig102822.602.1 vs. uniprot
Match: A0A6B1G7S6_9ACTN (Glycine betaine/L-proline ABC transporter ATP-binding protein n=2 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A6B1G7S6_9ACTN) HSP 1 Score: 241 bits (615), Expect = 7.150e-76 Identity = 121/167 (72.46%), Postives = 137/167 (82.04%), Query Frame = 1 Query: 1 CIMKDGEVVQIGTPEEILTQPATGYVAEFVQDVDQGRVIEVHEIMQPPAPVDRSADLTTALRGLEDRAGAFVLDDGGRPVALLTAADGIRAGSMGSTEVDAALRSDFEQCPPTATLNEVYAAAGRGLPIAVVDDDGVMVGNVDPRHIMEEMGRVEQLIDQFEREVFM 501 CIMKDG VVQIGTPEEILT+PATGYVAEFVQDVDQGRVI+VHE+M P P+ L+ AL +D AG F D G+PV+LLTAADG+RA MGS ++ ALRSDF++C P ATLNE+YAAAGRGL IAVVDDDG +VGN+DPR IMEEMGRVEQLID FEREVFM Sbjct: 248 CIMKDGAVVQIGTPEEILTEPATGYVAEFVQDVDQGRVIKVHEVMSEPRPIPADISLSDALTLCQDIAGRFCCDSSGKPVSLLTAADGLRARGMGSNDLKKALRSDFDRCSPDATLNELYAAAGRGLSIAVVDDDGTLVGNLDPRLIMEEMGRVEQLIDDFEREVFM 414
BLAST of mRNA_M-pyrifera_M_contig102822.602.1 vs. uniprot
Match: A0A7K1YQQ7_9ACTN (Glycine betaine/L-proline ABC transporter ATP-binding protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1YQQ7_9ACTN) HSP 1 Score: 238 bits (608), Expect = 6.860e-75 Identity = 123/167 (73.65%), Postives = 137/167 (82.04%), Query Frame = 1 Query: 1 CIMKDGEVVQIGTPEEILTQPATGYVAEFVQDVDQGRVIEVHEIMQPPAPVDRSADLTTALRGLEDRAGAFVLDDGGRPVALLTAADGIRAGSMGSTEVDAALRSDFEQCPPTATLNEVYAAAGRGLPIAVVDDDGVMVGNVDPRHIMEEMGRVEQLIDQFEREVFM 501 CIMKDG VVQIGTPEEILT+PATGYVAEFVQDVDQGRVI+V E+M P PV L+ A+ +D G F DD GRPVALLTAADG+R SMGS ++ AALRSDF++C P ATLNE+YAAAGRGL IAVVDDDG +VGN+DPR IMEEMGRVEQLID FEREVFM Sbjct: 242 CIMKDGAVVQIGTPEEILTEPATGYVAEFVQDVDQGRVIKVLEVMTEPKPVPADISLSQAMTLCDDVTGRFCCDDEGRPVALLTAADGLRVRSMGSDDLKAALRSDFDKCSPDATLNEMYAAAGRGLSIAVVDDDGKLVGNLDPRLIMEEMGRVEQLIDGFEREVFM 408
BLAST of mRNA_M-pyrifera_M_contig102822.602.1 vs. uniprot
Match: A0A6B1H2F9_9ACTN (Betaine/proline/choline family ABC transporter ATP-binding protein n=4 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1H2F9_9ACTN) HSP 1 Score: 237 bits (604), Expect = 2.670e-74 Identity = 119/167 (71.26%), Postives = 135/167 (80.84%), Query Frame = 1 Query: 1 CIMKDGEVVQIGTPEEILTQPATGYVAEFVQDVDQGRVIEVHEIMQPPAPVDRSADLTTALRGLEDRAGAFVLDDGGRPVALLTAADGIRAGSMGSTEVDAALRSDFEQCPPTATLNEVYAAAGRGLPIAVVDDDGVMVGNVDPRHIMEEMGRVEQLIDQFEREVFM 501 CIMKDG VVQIGTPEEILT+PATGYVAEFVQDVDQGRVI+VHE+MQ PAPV SA + AL + DR GAFVLD G P LLT D RA SMG+T++ +ALR+DFE+C P LNEVYAA GRGL IAV D+ GV+VGN+DPRHIMEEMGRVE LI+ FEREVF+ Sbjct: 241 CIMKDGAVVQIGTPEEILTEPATGYVAEFVQDVDQGRVIQVHEVMQQPAPVAASATIAEALGAMGDRIGAFVLDAAGAPTHLLTVEDAARAASMGTTDLGSALRTDFERCSPDDRLNEVYAACGRGLSIAVCDESGVLVGNLDPRHIMEEMGRVENLIEGFEREVFL 407
BLAST of mRNA_M-pyrifera_M_contig102822.602.1 vs. uniprot
Match: A0A3C0HQT6_9ACTN (ABC transporter ATP-binding protein n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HQT6_9ACTN) HSP 1 Score: 236 bits (602), Expect = 2.990e-73 Identity = 122/167 (73.05%), Postives = 134/167 (80.24%), Query Frame = 1 Query: 1 CIMKDGEVVQIGTPEEILTQPATGYVAEFVQDVDQGRVIEVHEIMQPPAPVDRSADLTTALRGLEDRAGAFVLDDGGRPVALLTAADGIRAGSMGSTEVDAALRSDFEQCPPTATLNEVYAAAGRGLPIAVVDDDGVMVGNVDPRHIMEEMGRVEQLIDQFEREVFM 501 CIMKDGEVVQIGTPEEILT+PATGYVAEFVQDVDQGRVI+VHEIM P P +A L AL L DRAG+FVLD G+PV++LTA DGIR G + DA +RSDF C P TLNEVYAAAG+GLPIAV D DG +VGN+DPRHIMEEMGRVE LID FEREVFM Sbjct: 307 CIMKDGEVVQIGTPEEILTEPATGYVAEFVQDVDQGRVIQVHEIMVDPQPTAANASLGEALTALGDRAGSFVLDADGKPVSVLTAGDGIRVSGSGGSLHDA-VRSDFHSCTPEMTLNEVYAAAGKGLPIAVCDADGKLVGNLDPRHIMEEMGRVESLIDNFEREVFM 472
BLAST of mRNA_M-pyrifera_M_contig102822.602.1 vs. uniprot
Match: A0A2G6KBC0_9ACTN (Glycine/betaine ABC transporter ATP-binding protein n=1 Tax=Ilumatobacter coccineus TaxID=467094 RepID=A0A2G6KBC0_9ACTN) HSP 1 Score: 232 bits (592), Expect = 2.120e-72 Identity = 117/166 (70.48%), Postives = 136/166 (81.93%), Query Frame = 1 Query: 4 IMKDGEVVQIGTPEEILTQPATGYVAEFVQDVDQGRVIEVHEIMQPPAPVDRSADLTTALRGLEDRAGAFVLDDGGRPVALLTAADGIRAGSMGSTEVDAALRSDFEQCPPTATLNEVYAAAGRGLPIAVVDDDGVMVGNVDPRHIMEEMGRVEQLIDQFEREVFM 501 IMKDGEVVQIGTPEEILT+PATGYVAEFVQDVDQGRVIEV EIM P P+D + L+ L L +RAGAFV+D GGRPV++LTA+DG R MGS + ALRSDF+ C P+ TLNEVYA AGRGLP+AVVD +G ++GN+DPR I+EE+GRVE LID FEREVFM Sbjct: 250 IMKDGEVVQIGTPEEILTRPATGYVAEFVQDVDQGRVIEVSEIMMAPNPIDPAMTLSAGLHHLGERAGAFVIDSGGRPVSILTASDGHRVSRMGSDRLADALRSDFDTCRPSNTLNEVYATAGRGLPVAVVDAEGRLIGNLDPRQIIEELGRVESLIDGFEREVFM 415
BLAST of mRNA_M-pyrifera_M_contig102822.602.1 vs. uniprot
Match: A0A4R7I4F9_9ACTN (Glycine betaine/proline transport system ATP-binding protein n=2 Tax=Acidimicrobiales TaxID=84993 RepID=A0A4R7I4F9_9ACTN) HSP 1 Score: 230 bits (586), Expect = 1.220e-71 Identity = 116/167 (69.46%), Postives = 135/167 (80.84%), Query Frame = 1 Query: 1 CIMKDGEVVQIGTPEEILTQPATGYVAEFVQDVDQGRVIEVHEIMQPPAPVDRSADLTTALRGLEDRAGAFVLDDGGRPVALLTAADGIRAGSMGSTEVDAALRSDFEQCPPTATLNEVYAAAGRGLPIAVVDDDGVMVGNVDPRHIMEEMGRVEQLIDQFEREVFM 501 CIMKDG VVQIGTPE+ILT+PATGYVAEFVQDVDQGRVI+V+EIM P P+D S + L+ L DR+GAFVLD G+PV++LT DGIR MGS+ + ALR+DF C P TLN VYAAAGRG+PIAVVD+ G +VGN+DPRHIMEEMGRVE LID FEREVF+ Sbjct: 237 CIMKDGAVVQIGTPEDILTKPATGYVAEFVQDVDQGRVIQVNEIMVEPKPLDPSLTVQQGLQHLGDRSGAFVLDAEGKPVSVLTTGDGIRVSGMGSSNLSDALRTDFAVCRPEDTLNTVYAAAGRGIPIAVVDESGRLVGNLDPRHIMEEMGRVESLIDGFEREVFL 403
BLAST of mRNA_M-pyrifera_M_contig102822.602.1 vs. uniprot
Match: A0A7Y3CTX7_9ACTN (Glycine betaine/L-proline ABC transporter ATP-binding protein n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y3CTX7_9ACTN) HSP 1 Score: 230 bits (586), Expect = 1.370e-71 Identity = 115/167 (68.86%), Postives = 135/167 (80.84%), Query Frame = 1 Query: 1 CIMKDGEVVQIGTPEEILTQPATGYVAEFVQDVDQGRVIEVHEIMQPPAPVDRSADLTTALRGLEDRAGAFVLDDGGRPVALLTAADGIRAGSMGSTEVDAALRSDFEQCPPTATLNEVYAAAGRGLPIAVVDDDGVMVGNVDPRHIMEEMGRVEQLIDQFEREVFM 501 CIMKDG VVQIGTPEEILTQPATGYVAEFVQDVDQGRVIEV+E+M P P+ + L AL L+ R+GAF +DD G+P+ LLT ADG+R +GS +V AALR+DF+ P ATLNEVYAAAGRGLPIAVV++ G + G++DPR IMEEMGRVE LID +EREVFM Sbjct: 241 CIMKDGLVVQIGTPEEILTQPATGYVAEFVQDVDQGRVIEVNEVMAEPQPLAPNLSLRDALTSLDGRSGAFTVDDAGKPIGLLTLADGLRVTGLGSDDVSAALRTDFDTTTPNATLNEVYAAAGRGLPIAVVNEAGELTGDLDPRQIMEEMGRVESLIDMYEREVFM 407 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102822.602.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102822.602.1 >prot_M-pyrifera_M_contig102822.602.1 ID=prot_M-pyrifera_M_contig102822.602.1|Name=mRNA_M-pyrifera_M_contig102822.602.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp MKDGEVVQIGTPEEILTQPATGYVAEFVQDVDQGRVIEVHEIMQPPAPVDback to top mRNA from alignment at M-pyrifera_M_contig102822:153..656- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102822.602.1 ID=mRNA_M-pyrifera_M_contig102822.602.1|Name=mRNA_M-pyrifera_M_contig102822.602.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig102822:153..656- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102822:153..656- >mRNA_M-pyrifera_M_contig102822.602.1 ID=mRNA_M-pyrifera_M_contig102822.602.1|Name=mRNA_M-pyrifera_M_contig102822.602.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig102822:153..656- (Macrocystis pyrifera P11B4 male)back to top |