mRNA_M-pyrifera_M_contig1028.595.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1028.595.1 vs. uniprot
Match: D8LPR4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPR4_ECTSI) HSP 1 Score: 336 bits (861), Expect = 1.580e-95 Identity = 204/385 (52.99%), Postives = 253/385 (65.71%), Query Frame = 1 Query: 2320 LVKALQLAYDPTLQRLWADWAVNEVDGQWFLVEVHGLKTDTDVRKAAEARKXXXXXXXXXXKVAAQVLTAHGVPSTHFCGDPDDLRARIAAANPTQEICLVEMSERLKAAP--KRQPRRPRTPSKVSQQTRKKLA--RRGASKSEKA-----GLGERRMANQYWRCAGDFCEARA-GERRASGDTSG-----RENEIPFEG---THPPEATENDDI-SKHLDGGXXXXXXXXXXXXXXXXXXXXXERVTDVENHKNRGGGIDNVVGRRKHALSVETPRTVLFRLVLNARAALLGWKASAADFSQMEKPVQLCSACYTVCSVLDRERTERTRRAMEAEDNCFKAGKARRSRRPHGWKSRMQHELENSLGADRHAVYRLMDNFNAAA 3417 L L+ AYDPTLQRLWADWAV+E +GQW+LVEVHG+KT+ D+R AA A+ KV+ + +P H CGDPD+LRARI+AA PTQE+ VE S+++ A KR+PRRP TPS V++ T+K L R GAS+ +K+ G RRM NQYWRCAGDFCE G+R+AS D +G R+N++ + P E + ++ L+G XXXXXX E D++VGRRKHALSVETPRTVLFRLVLNARAALL W+ SAA+FS MEKPVQLCS CY VCS ++R+R E TRRAM+AE+ KAGKARR+R+P GWKSR+QHELE SL ADRH V RL+D+F AAA Sbjct: 4 LTTVLRKAYDPTLQRLWADWAVHEDNGQWYLVEVHGVKTEADLRNAAAAKAVPPALAEVESKVSR---STRRIPPKHICGDPDELRARISAAGPTQELSFVEPSKKMIAVAESKRRPRRPPTPSMVAESTKKALLSRREGASERKKSVPKGGDGGARRMLNQYWRCAGDFCETHPDGQRQASADATGDKKGNRDNKVETGSLVVSQPSERARGRPVRNRGLEGASEKSSTGGGGXXXXXXDGTECEE--------------DDIVGRRKHALSVETPRTVLFRLVLNARAALLRWRPSAAEFSMMEKPVQLCSVCYMVCSTIERDRIETTRRAMDAEEEAAKAGKARRNRKPPGWKSRVQHELEESLSADRHVVSRLIDSFEAAA 371 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1028.595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1028.595.1 >prot_M-pyrifera_M_contig1028.595.1 ID=prot_M-pyrifera_M_contig1028.595.1|Name=mRNA_M-pyrifera_M_contig1028.595.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1413bp MKDGRRLSSGTFQDEWERSLRRETALQDEYRRAICVESGGVASDTGFDRWback to top mRNA from alignment at M-pyrifera_M_contig1028:7579..28812+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1028.595.1 ID=mRNA_M-pyrifera_M_contig1028.595.1|Name=mRNA_M-pyrifera_M_contig1028.595.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=21234bp|location=Sequence derived from alignment at M-pyrifera_M_contig1028:7579..28812+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1028:7579..28812+ >mRNA_M-pyrifera_M_contig1028.595.1 ID=mRNA_M-pyrifera_M_contig1028.595.1|Name=mRNA_M-pyrifera_M_contig1028.595.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=8478bp|location=Sequence derived from alignment at M-pyrifera_M_contig1028:7579..28812+ (Macrocystis pyrifera P11B4 male)back to top |