mRNA_M-pyrifera_M_contig102795.594.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig102795.594.1
Unique NamemRNA_M-pyrifera_M_contig102795.594.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig102795.594.1 vs. uniprot
Match: A0A7M7G952_NASVI (SAYSvFN domain-containing protein n=3 Tax=Pteromalinae TaxID=272242 RepID=A0A7M7G952_NASVI)

HSP 1 Score: 58.2 bits (139), Expect = 1.870e-8
Identity = 37/98 (37.76%), Postives = 53/98 (54.08%), Query Frame = 1
Query:    1 LPWGRGQ-AISGAQVVGYDDEDEPISTEPLWKSALASLKGLGVKAYCILAVWAALYWVAVQVEFGVVYFVVSLLLLVYTSMGSSDGKEEKTSAYSVFN 291
            L W R   A + A +   DD +  IS E +  +   S        +    +WA LY +AVQV+FG VYFV+S+L+ +Y +  S   K+ + SAYSVFN
Sbjct:   29 LSWQRSSPATAAAALDDKDDLESIISEESIDLTPPPSPFCSRTMCFLYFMLWATLYIIAVQVQFGAVYFVISVLVFIYFNTRSGPKKKGEVSAYSVFN 126          
BLAST of mRNA_M-pyrifera_M_contig102795.594.1 vs. uniprot
Match: UPI00083C6825 (uncharacterized protein LOC108548890 n=1 Tax=Eufriesea mexicana TaxID=516756 RepID=UPI00083C6825)

HSP 1 Score: 55.1 bits (131), Expect = 3.280e-7
Identity = 35/104 (33.65%), Postives = 55/104 (52.88%), Query Frame = 1
Query:    1 LPWGRGQAISGAQVVG-----YDDED--EPISTEPLWKSALASLKGLGVKAYCILAVWAALYWVAVQVEFGVVYFVVSLLLLVYTSMGSSDGKEEKTSAYSVFN 291
            LPW R ++   + VV       DD+D     S + + +S    L+ +    Y +L  W  LY +A++ EFG VYF++S L+ ++ +  S   K  + SAYSVFN
Sbjct:   34 LPWSRNKSAEDSSVVTPLNDVKDDQDMESTCSDDSVNQSQCTMLRIIAYLLYFLL--WVTLYIIAIEFEFGAVYFILSTLIFIWLNTRSRPKKPGELSAYSVFN 135          
BLAST of mRNA_M-pyrifera_M_contig102795.594.1 vs. uniprot
Match: A0A6P8Y807_THRPL (uncharacterized protein LOC117640091 n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8Y807_THRPL)

HSP 1 Score: 54.7 bits (130), Expect = 5.500e-7
Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 1
Query:   46 GYDDEDEPISTEPLWKSALASLKGLGVKAYCILAV-WAALYWVAVQVEFGVVYFVVSLLLLVYTSMGSSDGKEEKTSAYSVFN 291
            G DDED+   + P W         L +  Y +  + WA L  +AVQ+EFG V+F++SLL+L++ +  +   K  + SAYSVFN
Sbjct:   76 GSDDEDDSGCSSPPW---------LSITLYALYTLLWATLMGIAVQLEFGAVFFILSLLVLMWLNTRTKKKKPGEPSAYSVFN 149          
BLAST of mRNA_M-pyrifera_M_contig102795.594.1 vs. uniprot
Match: A0A154P2R2_DUFNO (SAYSvFN domain-containing protein 1 n=2 Tax=Dufourea novaeangliae TaxID=178035 RepID=A0A154P2R2_DUFNO)

HSP 1 Score: 53.1 bits (126), Expect = 1.880e-6
Identity = 37/108 (34.26%), Postives = 57/108 (52.78%), Query Frame = 1
Query:    1 LPWGRGQAI---------SGAQVVGYDDED-EPISTEP-LWKSALASLKGLGVKAYCILAVWAALYWVAVQVEFGVVYFVVSLLLLVYTSMGSSDGKEEKTSAYSVFN 291
            LPW   Q +         +  +V   DD+D E  +T+  + ++    LK +    Y +L  WA LY +A++ EFG VYFV+S L+ ++ +  S   K  + SAYSVFN
Sbjct:   34 LPWNENQTMKEPLLVVSPNNVEVSLQDDQDTESTNTDDSIDQTQCTMLKKVMYALYFLL--WATLYVIAIEFEFGAVYFVLSTLIFIWVNTHSRPKKPGELSAYSVFN 139          
BLAST of mRNA_M-pyrifera_M_contig102795.594.1 vs. uniprot
Match: UPI0010F69E25 (SAYSvFN domain-containing protein 1 n=2 Tax=Osmia TaxID=124287 RepID=UPI0010F69E25)

HSP 1 Score: 53.1 bits (126), Expect = 1.910e-6
Identity = 33/104 (31.73%), Postives = 53/104 (50.96%), Query Frame = 1
Query:    1 LPWGRGQAISGAQVVGYDDEDEPI-------STEPLWKSALASLKGLGVKAYCILAVWAALYWVAVQVEFGVVYFVVSLLLLVYTSMGSSDGKEEKTSAYSVFN 291
            LPW R +  +   ++   ++ E +       S +       + L  +    Y +L  WA LY +A++ EFG VYFV+S L+ ++ + GS   K  + SAYSVFN
Sbjct:   39 LPWNRNKTATETPLLPPTNDSEDVQDMESTCSDDXXXXXQCSVLTTVTYLLYFLL--WATLYIIAIEFEFGAVYFVLSTLVFIWLNTGSKPKKPGELSAYSVFN 140          
BLAST of mRNA_M-pyrifera_M_contig102795.594.1 vs. uniprot
Match: UPI0007719A9C (SAYSvFN domain-containing protein 1 isoform X1 n=3 Tax=Cephus cinctus TaxID=211228 RepID=UPI0007719A9C)

HSP 1 Score: 52.4 bits (124), Expect = 2.980e-6
Identity = 25/49 (51.02%), Postives = 37/49 (75.51%), Query Frame = 1
Query:  151 WAALYWVAVQVEFGVVYFVVSLLLLVYTSMGSSDGKEEKTSAYSVFNKH 297
            WA LY +AVQ EFG VYF++SLL+L++ +  +   ++ + SAYSVFNK+
Sbjct:   79 WATLYIIAVQFEFGAVYFILSLLVLIWINTRTGPKRKGEPSAYSVFNKN 127          
BLAST of mRNA_M-pyrifera_M_contig102795.594.1 vs. uniprot
Match: A0A814ELW9_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814ELW9_9BILA)

HSP 1 Score: 52.4 bits (124), Expect = 3.680e-6
Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 1
Query:   49 YDDEDEPISTEPLWKSALASLKGLGVKAYCILAVWAALYWVAVQVEFGVVYFVVSLLLLVYTSMGSSDGKEEKTSAYSVFN 291
            Y +E E I T   W S LA LK L         +W  LY + +++EFGVVY + SLL+LVY  + ++ GK+ K SAYSVFN
Sbjct:   78 YQEEPEEIKT---WISKLA-LKFL---------LWVLLYALFIKLEFGVVYLICSLLVLVY--LNTNVGKKSKISAYSVFN 143          
BLAST of mRNA_M-pyrifera_M_contig102795.594.1 vs. uniprot
Match: UPI001CDD2319 (SAYSvFN domain-containing protein 1 n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=UPI001CDD2319)

HSP 1 Score: 51.6 bits (122), Expect = 5.320e-6
Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 1
Query:   55 DEDEPISTEPLWKSALASLKGLGVKAYCILAVWAALYWVAVQVEFGVVYFVVSLLLLVYTSMGSSDGKEEKTSAYSVFN 291
            D+ E I++E      L     L +K   +L +W  +Y +A+QVEFG VYF++S L  ++ +  S   K+ + SAYSVFN
Sbjct:   40 DDLESINSEESTDIPLPEESSLALKLLYLL-LWITVYLIALQVEFGAVYFIISALFFIWINTRSEKKKKGEISAYSVFN 117          
BLAST of mRNA_M-pyrifera_M_contig102795.594.1 vs. uniprot
Match: UPI0006C99231 (SAYSvFN domain-containing protein 1 n=1 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI0006C99231)

HSP 1 Score: 51.2 bits (121), Expect = 7.710e-6
Identity = 34/99 (34.34%), Postives = 51/99 (51.52%), Query Frame = 1
Query:    1 LPWGRGQAISGAQVVGYDDEDEPISTEPLWKSALASLKGLGVKAYCIL--AVWAALYWVAVQVEFGVVYFVVSLLLLVYTSMGSSDGKEEKTSAYSVFN 291
            L W R  + +G+ V   DD +  IS + +  S             C L   +WA LY +A++ EFG  YFV+S L+ +Y +  S   ++ + SAYSVFN
Sbjct:   25 LSWQR--SPTGSTVDDKDDLESIISEDSIDFSTPPRDSTFFTWTMCCLYFLLWATLYIIAIETEFGAAYFVISALIFIYFNTRSGPKRKGEVSAYSVFN 121          
BLAST of mRNA_M-pyrifera_M_contig102795.594.1 vs. uniprot
Match: A0A0N1IP58_PAPMA (Uncharacterized protein C6orf64 n=4 Tax=Papilio TaxID=7145 RepID=A0A0N1IP58_PAPMA)

HSP 1 Score: 51.6 bits (122), Expect = 8.620e-6
Identity = 32/90 (35.56%), Postives = 51/90 (56.67%), Query Frame = 1
Query:   34 AQVVGYDDEDEP--ISTEPLWKSALASLKGLGVKAYCILAVWAALYWVAVQVEFGVVYFVVSLLLLVYTSMGSSDGKEEKTSAYSVFNKH 297
            +QV+   DE      + EP+ KS   S K    K      +W  +Y + ++++FG VYFV+SLL+ +Y +  +   KE + SAYSVFN++
Sbjct:   66 SQVLIQPDESPSGGRTLEPINKSTQESWKYFITKWSIYFIIWLTVYIIFLKLQFGAVYFVISLLIGIYLNTRTGPKKEGEVSAYSVFNEN 155          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102795.594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7M7G952_NASVI1.870e-837.76SAYSvFN domain-containing protein n=3 Tax=Pteromal... [more]
UPI00083C68253.280e-733.65uncharacterized protein LOC108548890 n=1 Tax=Eufri... [more]
A0A6P8Y807_THRPL5.500e-738.55uncharacterized protein LOC117640091 n=1 Tax=Thrip... [more]
A0A154P2R2_DUFNO1.880e-634.26SAYSvFN domain-containing protein 1 n=2 Tax=Dufour... [more]
UPI0010F69E251.910e-631.73SAYSvFN domain-containing protein 1 n=2 Tax=Osmia ... [more]
UPI0007719A9C2.980e-651.02SAYSvFN domain-containing protein 1 isoform X1 n=3... [more]
A0A814ELW9_9BILA3.680e-645.68Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
UPI001CDD23195.320e-637.97SAYSvFN domain-containing protein 1 n=1 Tax=Aphidi... [more]
UPI0006C992317.710e-634.34SAYSvFN domain-containing protein 1 n=1 Tax=Copido... [more]
A0A0N1IP58_PAPMA8.620e-635.56Uncharacterized protein C6orf64 n=4 Tax=Papilio Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102795contigM-pyrifera_M_contig102795:6..302 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionUncharacterised domain SAYSvFN
Ec32 orthologEc-01_003920.1
Exons1
Model size297
Cds size297
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815531.7696767-CDS-M-pyrifera_M_contig102795:5..3021622815531.7696767-CDS-M-pyrifera_M_contig102795:5..302Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102795 6..302 -
1692277451.8702412-CDS-M-pyrifera_M_contig102795:5..3021692277451.8702412-CDS-M-pyrifera_M_contig102795:5..302Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102795 6..302 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102795.594.1prot_M-pyrifera_M_contig102795.594.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig102795 6..302 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig102795.594.1

>prot_M-pyrifera_M_contig102795.594.1 ID=prot_M-pyrifera_M_contig102795.594.1|Name=mRNA_M-pyrifera_M_contig102795.594.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp
LPWGRGQAISGAQVVGYDDEDEPISTEPLWKSALASLKGLGVKAYCILAV
WAALYWVAVQVEFGVVYFVVSLLLLVYTSMGSSDGKEEKTSAYSVFNKH
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mRNA from alignment at M-pyrifera_M_contig102795:6..302-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig102795.594.1 ID=mRNA_M-pyrifera_M_contig102795.594.1|Name=mRNA_M-pyrifera_M_contig102795.594.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=297bp|location=Sequence derived from alignment at M-pyrifera_M_contig102795:6..302- (Macrocystis pyrifera P11B4 male)
CTGCCATGGGGGAGGGGACAGGCTATTAGTGGAGCACAAGTGGTGGGCTA CGACGACGAGGATGAGCCCATCAGCACGGAGCCCTTGTGGAAGTCTGCTC TGGCGTCGCTGAAAGGCCTGGGCGTGAAGGCATACTGTATATTGGCGGTT TGGGCGGCGCTGTACTGGGTGGCTGTGCAGGTGGAGTTCGGTGTGGTGTA TTTCGTCGTGTCTCTTTTGCTGCTAGTGTACACCAGCATGGGCTCGTCCG ATGGCAAGGAGGAGAAGACTTCAGCATACTCTGTCTTCAACAAGCAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig102795:6..302-

>mRNA_M-pyrifera_M_contig102795.594.1 ID=mRNA_M-pyrifera_M_contig102795.594.1|Name=mRNA_M-pyrifera_M_contig102795.594.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig102795:6..302- (Macrocystis pyrifera P11B4 male)
CTGCCATGGGGGAGGGGACAGGCTATTAGTGGAGCACAAGTGGTGGGCTA
CGACGACGAGGATGAGCCCATCAGCACGGAGCCCTTGTGGAAGTCTGCTC
TGGCGTCGCTGAAAGGCCTGGGCGTGAAGGCATACTGTATATTGGCGGTT
TGGGCGGCGCTGTACTGGGTGGCTGTGCAGGTGGAGTTCGGTGTGGTGTA
TTTCGTCGTGTCTCTTTTGCTGCTAGTGTACACCAGCATGGGCTCGTCCG
ATGGCAAGGAGGAGAAGACTTCAGCATACTCTGTCTTCAACAAGCATCTG
CCATGGGGGAGGGGACAGGCTATTAGTGGAGCACAAGTGGTGGGCTACGA
CGACGAGGATGAGCCCATCAGCACGGAGCCCTTGTGGAAGTCTGCTCTGG
CGTCGCTGAAAGGCCTGGGCGTGAAGGCATACTGTATATTGGCGGTTTGG
GCGGCGCTGTACTGGGTGGCTGTGCAGGTGGAGTTCGGTGTGGTGTATTT
CGTCGTGTCTCTTTTGCTGCTAGTGTACACCAGCATGGGCTCGTCCGATG
GCAAGGAGGAGAAGACTTCAGCATACTCTGTCTTCAACAAGCAT
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