mRNA_M-pyrifera_M_contig102785.592.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102785.592.1 vs. uniprot
Match: A0A212C608_CEREH (IBB domain-containing protein n=3 Tax=Amniota TaxID=32524 RepID=A0A212C608_CEREH) HSP 1 Score: 125 bits (314), Expect = 2.940e-31 Identity = 71/192 (36.98%), Postives = 100/192 (52.08%), Query Frame = 1 Query: 1 VKEQAVWALGKVAGDGYECRDFVLAKGAMQPLLEIATNGTRISQRRYAAWAVSNLFRGR-PPPLLQLLLPCLPYVCNLVTSDDQQIAVDSLWCLSYFCDGGDERIEHMLNTGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGALLSVAKPSVQREIFWTLSNITAGEISQVRMF 573 V+EQAVWALG +AGD ECRDFVL + PLLE+ TN R++ R A WA+SNL RG+ PPP + PCL + L+ S D + D W LSY DG +++I+ ++++GV L LLS +K S+++E WT+SNITAG +Q+++F Sbjct: 145 VQEQAVWALGNIAGDNAECRDFVLNCEILPPLLELLTNSNRLTTTRNAVWALSNLCRGKNPPPNFSKVSPCLNVLSRLLFSSDPDVLADVCWALSYLSDGSNDKIQAVIDSGVCRRLVILNCSALP-------------------------------CLLHLLSSSKESIRKEACWTVSNITAGNRAQIQVF 305
BLAST of mRNA_M-pyrifera_M_contig102785.592.1 vs. uniprot
Match: A0A2K6FAB4_PROCO (Importin subunit alpha n=5 Tax=Propithecus coquereli TaxID=379532 RepID=A0A2K6FAB4_PROCO) HSP 1 Score: 121 bits (304), Expect = 9.590e-29 Identity = 70/195 (35.90%), Postives = 99/195 (50.77%), Query Frame = 1 Query: 1 VKEQAVWALGKVAGDGYECRDFVLAKGAMQPLLEIATNGTRISQRRYAAWAVSNLFRGR-PPPLLQLLLPCLPYVCNLVTSDDQQIAVDSLWCLSYFCDGGDERIEHMLNTGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGALLSVAKPSVQREIFWTLSNITAGEISQVRMFADS 582 V+EQAVWALG +AGD ECRDFVL + PLL++ TN R++ R A WA+SNL RG+ PPP + PCL + L+ S D + D W LSY DG +++I+ ++++GV L LLS K S+++E WT+SNITAG +Q++ D+ Sbjct: 163 VQEQAVWALGNIAGDNAECRDFVLNCEILPPLLDLLTNSNRLTTTRNAVWALSNLCRGKNPPPNFSKVSPCLNVLSRLLFSSDPDVLADVCWALSYLSDGPNDKIQAVIDSGVCRRLVILNCSALP-------------------------------CLLHLLSSPKESIRKEACWTVSNITAGNRAQIQAVIDA 326
BLAST of mRNA_M-pyrifera_M_contig102785.592.1 vs. uniprot
Match: UPI00063F7B5B (importin subunit alpha-6 n=1 Tax=Propithecus coquereli TaxID=379532 RepID=UPI00063F7B5B) HSP 1 Score: 120 bits (302), Expect = 1.760e-28 Identity = 69/190 (36.32%), Postives = 97/190 (51.05%), Query Frame = 1 Query: 1 VKEQAVWALGKVAGDGYECRDFVLAKGAMQPLLEIATNGTRISQRRYAAWAVSNLFRGR-PPPLLQLLLPCLPYVCNLVTSDDQQIAVDSLWCLSYFCDGGDERIEHMLNTGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGALLSVAKPSVQREIFWTLSNITAGEISQVR 567 V+EQAVWALG +AGD ECRDFVL + PLL++ TN R++ R A WA+SNL RG+ PPP + PCL + L+ S D + D W LSY DG +++I+ ++++GV L LLS K S+++E WT+SNITAG +Q++ Sbjct: 118 VQEQAVWALGNIAGDNAECRDFVLNCEILPPLLDLLTNSNRLTTTRNAVWALSNLCRGKNPPPNFSKVSPCLNVLSRLLFSSDPDVLADVCWALSYLSDGPNDKIQAVIDSGVCRRLVELLIKPLDRPNKIGGTKKRDVTASEEGGQVILNCSALPCLLH-LLSSPKESIRKEACWTVSNITAGNRAQIQ 306
BLAST of mRNA_M-pyrifera_M_contig102785.592.1 vs. uniprot
Match: A0A0J7K908_LASNI (Importin subunit alpha-7 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K908_LASNI) HSP 1 Score: 116 bits (291), Expect = 1.810e-28 Identity = 53/113 (46.90%), Postives = 75/113 (66.37%), Query Frame = 1 Query: 1 VKEQAVWALGKVAGDGYECRDFVLAKGAMQPLLEIATNGTRISQRRYAAWAVSNLFRGR-PPPLLQLLLPCLPYVCNLVTSDDQQIAVDSLWCLSYFCDGGDERIEHMLNTGV 336 V+EQAVWALG +AGD ECRD VLA G + PLL++ + TR+S R A WA+SNL RG+ P P + PCLP + +L+ D + D+ W LSY DG +++I+ +++ GV Sbjct: 111 VQEQAVWALGNIAGDSPECRDHVLANGILTPLLQVLSKATRLSMTRNAVWALSNLCRGKNPAPAFAKVAPCLPVLAHLLNHTDYDVLADACWALSYLSDGPNDKIQAVIDAGV 223
BLAST of mRNA_M-pyrifera_M_contig102785.592.1 vs. uniprot
Match: A0A498IGK5_MALDO (IBB domain-containing protein n=2 Tax=Malus domestica TaxID=3750 RepID=A0A498IGK5_MALDO) HSP 1 Score: 118 bits (296), Expect = 3.330e-28 Identity = 65/191 (34.03%), Postives = 94/191 (49.21%), Query Frame = 1 Query: 1 VKEQAVWALGKVAGDGYECRDFVLAKGAMQPLLEIATNGTRISQRRYAAWAVSNLFRGRPPPLLQLLLPCLPYVCNLVTSDDQQIAVDSLWCLSYFCDGGDERIEHMLNTGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGALLSVA-KPSVQREIFWTLSNITAGEISQVRM 570 V+EQAVWALG VAGD CRD VL GA+ PLL ++S R A W +SN RG+P P + + P LP + L+ S+D+++ D+ W LSY DG +++I+ ++ +GV L LL+ K S+++E WT+SNITAG Q+R+ Sbjct: 174 VREQAVWALGNVAGDSPRCRDLVLGNGALLPLLSQLNENAKLSMLRNATWTLSNFCRGKPQPPFEQVKPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIESGVCPRLVELLMHPSPSVLIPALRTVGNIVTGDDMQTQVIIQHQALPCLLNLLTNNYKKSIKKEACWTISNITAGNKEQIRV 364
BLAST of mRNA_M-pyrifera_M_contig102785.592.1 vs. uniprot
Match: A0A2C9VTE1_MANES (Importin subunit alpha n=12 Tax=Euphorbiaceae TaxID=3977 RepID=A0A2C9VTE1_MANES) HSP 1 Score: 120 bits (301), Expect = 4.380e-28 Identity = 68/202 (33.66%), Postives = 100/202 (49.50%), Query Frame = 1 Query: 1 VKEQAVWALGKVAGDGYECRDFVLAKGAMQPLLEIATNGTRISQRRYAAWAVSNLFRGRPPPLLQLLLPCLPYVCNLVTSDDQQIAVDSLWCLSYFCDGGDERIEHMLNTGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGALLSVA-KPSVQREIFWTLSNITAGEISQVRMFADSPLFAQTV 603 V+EQAVWALG +AGD +CRD VL GA+ PLL ++S R A W +SN RG+P PL + P LP + L+ S+D+++ D+ W LSY DG +++I+ ++ GV L LL+ K S+++E WT+SNITAG I+QV+ ++ + A V Sbjct: 176 VREQAVWALGNIAGDSPKCRDLVLGCGALMPLLAQFNEHAKLSMLRNATWTLSNFCRGKPQPLFEQTKPALPALERLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHSSPTVLIPALRTVGNIVTGDDMQTQCMINHQTLPCLLNLLTHNYKKSIKKEACWTISNITAGNINQVQAIIEAGIIAPLV 377
BLAST of mRNA_M-pyrifera_M_contig102785.592.1 vs. uniprot
Match: A0A6D2HKV7_9BRAS (Importin subunit alpha n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2HKV7_9BRAS) HSP 1 Score: 119 bits (299), Expect = 8.730e-28 Identity = 67/202 (33.17%), Postives = 97/202 (48.02%), Query Frame = 1 Query: 1 VKEQAVWALGKVAGDGYECRDFVLAKGAMQPLLEIATNGTRISQRRYAAWAVSNLFRGRPPPLLQLLLPCLPYVCNLVTSDDQQIAVDSLWCLSYFCDGGDERIEHMLNTGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGALLSVA-KPSVQREIFWTLSNITAGEISQVRMFADSPLFAQTV 603 V+EQAVWALG VAGD +CRD VL GAM P+L ++S R A W +SN RG+PPP+ + P L LV S+D+++ D+ W LSY DG +++I+ ++ GV+ L LL+ K S+++E W +SNITAG Q++ ++ L A V Sbjct: 173 VREQAVWALGNVAGDSPQCRDLVLGSGAMAPMLNQLNEHAKLSMLRNATWTLSNFCRGKPPPVFDQVKPALLAFERLVLSNDEEVLTDTCWALSYLSDGTNDKIQAVIEAGVVPRLVELLLHPSPSVLIPALRCVGNIVTGDDQQTQWVISSGALPCLANLLTQNYKKSIKKEACWAISNITAGNREQIQTVVEADLIAPLV 374
BLAST of mRNA_M-pyrifera_M_contig102785.592.1 vs. uniprot
Match: A0A293MIU7_ORNER (Uncharacterized protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MIU7_ORNER) HSP 1 Score: 117 bits (292), Expect = 1.340e-27 Identity = 53/113 (46.90%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 1 VKEQAVWALGKVAGDGYECRDFVLAKGAMQPLLEIATNGTRISQRRYAAWAVSNLFRGR-PPPLLQLLLPCLPYVCNLVTSDDQQIAVDSLWCLSYFCDGGDERIEHMLNTGV 336 V+EQAVWALG +AGD ECRD+VL +G + PLL++ TR S R A WA+SNL RG+ PPP + + PCLP + L+ +D + D+ W LSY DG +++I+ +++ GV Sbjct: 98 VQEQAVWALGNIAGDSPECRDYVLGQGILMPLLQLIGKSTRTSMTRNAVWALSNLCRGKNPPPKFEEVAPCLPLLARLLYMNDFDVLADACWALSYLSDGPNDKIQAVIDAGV 210
BLAST of mRNA_M-pyrifera_M_contig102785.592.1 vs. uniprot
Match: A0A8D0HG26_SPHPU (Karyopherin subunit alpha 5 n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0HG26_SPHPU) HSP 1 Score: 112 bits (281), Expect = 1.700e-27 Identity = 53/113 (46.90%), Postives = 75/113 (66.37%), Query Frame = 1 Query: 1 VKEQAVWALGKVAGDGYECRDFVLAKGAMQPLLEIATNGTRISQRRYAAWAVSNLFRGR-PPPLLQLLLPCLPYVCNLVTSDDQQIAVDSLWCLSYFCDGGDERIEHMLNTGV 336 V+EQAVWALG +AGD ECRD+VL G + PLLE+ TN R++ R A WA+SNL RG+ PPP + P L + L+ S D + D+ W LSY DG +++I+ ++++GV Sbjct: 77 VQEQAVWALGNIAGDNAECRDYVLNCGILSPLLELLTNSNRLTTTRNAVWALSNLCRGKNPPPDFSKVSPSLSILSRLLFSSDPDVLADACWALSYLSDGPNDKIQAVIDSGV 189
BLAST of mRNA_M-pyrifera_M_contig102785.592.1 vs. uniprot
Match: A0A2K3P583_TRIPR (Importin subunit alpha n=3 Tax=Trifolium TaxID=3898 RepID=A0A2K3P583_TRIPR) HSP 1 Score: 119 bits (297), Expect = 1.870e-27 Identity = 66/202 (32.67%), Postives = 98/202 (48.51%), Query Frame = 1 Query: 1 VKEQAVWALGKVAGDGYECRDFVLAKGAMQPLLEIATNGTRISQRRYAAWAVSNLFRGRPPPLLQLLLPCLPYVCNLVTSDDQQIAVDSLWCLSYFCDGGDERIEHMLNTGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGALLSVA-KPSVQREIFWTLSNITAGEISQVRMFADSPLFAQTV 603 V+EQAVWALG VAGD CRD VL+ GA+ PLL ++S R A W +SN RG+P P + P LP + L+ S+D+++ D+ W LSY DG +++I+ +++ GV L +LL+ K S+++E WT+SNITAG Q++ D+ + V Sbjct: 176 VREQAVWALGNVAGDSPRCRDLVLSHGALLPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPAFDQVKPALPALAQLIHSNDEEVLTDACWALSYLSDGANDKIQGVIDAGVCSRLVELLLHPSPSVLIPALRTVGNIVTGDDLQTQVIINHRVLPCLMSLLTNNYKKSIKKEACWTISNITAGNKQQIQDVIDANIIGPLV 377 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102785.592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102785.592.1 >prot_M-pyrifera_M_contig102785.592.1 ID=prot_M-pyrifera_M_contig102785.592.1|Name=mRNA_M-pyrifera_M_contig102785.592.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp VKEQAVWALGKVAGDGYECRDFVLAKGAMQPLLEIATNGTRISQRRYAAWback to top mRNA from alignment at M-pyrifera_M_contig102785:4..654- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102785.592.1 ID=mRNA_M-pyrifera_M_contig102785.592.1|Name=mRNA_M-pyrifera_M_contig102785.592.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=651bp|location=Sequence derived from alignment at M-pyrifera_M_contig102785:4..654- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102785:4..654- >mRNA_M-pyrifera_M_contig102785.592.1 ID=mRNA_M-pyrifera_M_contig102785.592.1|Name=mRNA_M-pyrifera_M_contig102785.592.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig102785:4..654- (Macrocystis pyrifera P11B4 male)back to top |