mRNA_M-pyrifera_M_contig10274.590.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10274.590.1 vs. uniprot
Match: D8LI40_ECTSI (A to I editase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI40_ECTSI) HSP 1 Score: 422 bits (1084), Expect = 5.660e-134 Identity = 327/754 (43.37%), Postives = 388/754 (51.46%), Query Frame = 1 Query: 1 CLRVVTLATGNKCVGRDKIPEDGSVVHDSHAEVLARRALMLRLWKELHFLIPAELLVEGTDMRTAARTKKRSCDGVVVGGXXXXXXXXXXXXX----TVAVHAEVPTGSPVPSLSAPAGGDRLLLLLERS-----AGG--AWRLKPHLRLHLYISDPPCGDASIYEQQAQHRPESDGSSSSRSEAPPERSFGDKDPSHAGPRRVEEDATPVTVSDERGRSCDRVKRQRRAAAAVVESGGKCSSSLPPLSSPCRCPESTGDRGGCRDRAGGGXXXXXXXXXXXXRGADTMSFTGAKIITAVKEKGSVDGTFERRRDGEGRPAGELVLRIDREQEQVLGALRIKSSRSNMSEEGRTMSMSCSDKLAKWAVLGLQQGGLLASWVEPISLSSIVISADPRTDGTAPLLAALARAVPRRAAAAXXXA--DARTSSGDGPLETGHGPF-----RQNVHVAVASVVFDKSKAQVDLQSGGRDDGCRAPGGKGVWVPTPPGVIYVPSMLSFIAVSDMSELRALTEGR-PLPSDCSGSSSLSGSSTAAHTLEGRGKKHPGDKKKARKKPTTVPSGTALNWIDALGTGMGAGPGGGDARVVQAEVTLSATGRRQGAVSKGVLTPRMRSRLCRAVLLEAAEKAARMYLPRSAPMCDKDEGDXXXXXXXRSTPADLAGEGRRGGRG---GGVHCFGGRRPRPYWRLKNANSSYCARRAAMLSTPTFEAWLVAGRDKQEFSVDENCVVPLAHQPPASRLLPGVPPPT 2196 CLRV++LATGNKCVGRDKIP+DGSVVHDSHAEVLARRAL+LRLW+ELH + + A R + + D GG T A + P+ P D +LLLERS AG +WRLKP++RLHLYISD PCGDASIYEQ+ Q P G S+R GD DP G S P S+P S G+R G D G R ++ G + AV D + R L + +EQ +GALRIKSSRSN+SEEGRTMSMSCSDKLAKWA LG+Q GGLLASWVEPI LSSIVISADPRTDG APL +AL RA+P RAA A + D T + G H P + + V V+ V F +SKAQ + + + C + G G P V S+ + +++D S R P +D SG + G+ + + R ++ RK VPSGT+LNWI+ LGTG G GPGGGD +QAEVTLSATGR QGAVSKGVLT R RSRLCRA LLEAA AR YLP+ APMCD D T AGEG G G GG R YWRLK A+ +Y RR AMLSTPTF AWLV G+DKQ F+VDE V L + PASR PPPT Sbjct: 58 CLRVISLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWRELHLRVSS----------AAGRQQDVTIDERKGGGTPCNSGRSDGRSTPSSSTTAATVDAHPQPPLYGGVLPGEDDGRILLLERSPQATDAGACISWRLKPYIRLHLYISDAPCGDASIYEQKRQ-APNVGGGGSARCGG------GDGDP-----------------------------------------GNDSSWDDAPRSTPLAGSRSDGERRGRGDADRG----------DAKRARCAVAIAG--LSDAVAPSPRPDLPLDEERSCSAASLNPLDCKPREPEEQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWAFLGVQ-GGLLASWVEPIFLSSIVISADPRTDGPAPLASALTRAIPGRAALANRRSSFDGTTGTVGGEEHLSHPPMPREEEEERMAVFVSEVTFARSKAQSEQRVFDDEGSCSSTSGVGSPGSITPAKATVSSVKASPSIADASIAAGSARQRMPGDNDRSGRETSQGTRSDNSIIGKRSRRD-------RKPKKVVPSGTSLNWIEGLGTGRGTGPGGGDTARIQAEVTLSATGRMQGAVSKGVLTLRTRSRLCRARLLEAANLVARAYLPQRAPMCDHHYSDIEGTG--EETETVQAGEGASGSEGPESGG---------RSYWRLKQASRAYRVRREAMLSTPTFRAWLVGGKDKQRFAVDERTGVVLLAKAPASR-----PPPT 717
BLAST of mRNA_M-pyrifera_M_contig10274.590.1 vs. uniprot
Match: A0A835ZEK1_9STRA (A to I editase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEK1_9STRA) HSP 1 Score: 115 bits (289), Expect = 4.010e-23 Identity = 133/436 (30.50%), Postives = 172/436 (39.45%), Query Frame = 1 Query: 4 LRVVTLATGNKCVGRDKIPEDGSVVHDSHAEVLARRALMLRLWKELHFLIPAELLVEGTDMRTAARTKKRSCDGVVVGGXXXXXXXXXXXXXTVAVHAEVPTGSPVPSLSAPAGGDRLLLLLERSAGGAWRLKPHLRLHLYISDPPCGDASIYEQQAQHRPESDGSSSSRSEAPPERSFGDKDPSHAGPRRVEEDATPVTVSDERGRSCDRVKRQRRAAA----------------------AVVESGGKCSSSLPPLSSPCRCPESTGDRGGCRDRAGGGXXXXXXXXXXXXRGADTMSFTGAKIITAVKEKGSVDGTFERRRDGEGRPA---------GELVLRIDREQEQVLGALRIKSSRSNMSEEGRTMSMSCSDKLAKWAVLGLQQGGLLASWVEPISLSSIVISADPRTDGTAPLLAALARAVPRRAAA 1218 L V+ LATG KC+G+ K+P DGS+VHDSHAEVLARR L+ L + L AA T+ D D L G +RL+ RLHLYIS+PPCGDASIY + A P + +++ A E + DAT + +V + S S+ +SP CP + G D G+ S +TA E G V + G G A G L ++RE Q +G LR+KS RS++ E RT SMSCSDKLA+WAVLGLQ G LL W+EP+ LSS+ +SAD R A AA+ RA+ RAAA Sbjct: 19 LAVIALATGTKCMGQSKLPPDGSIVHDSHAEVLARRCLVRLLGEHLR----------------AALTRAGGSD------------------------------------------DSRNFLESTGVEGRFRLRRGHRLHLYISEPPCGDASIYPRVADSPPAAVEAAARADTATAEAAL---------------DATQLPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMVPAPAAASHSV---NSPT-CPLKRANNSGAGDAP---HAKKPKLNGDSTEGSGLPSDGATMAVTA--ENGDVVAGGQ---GGSGAHAAGAVAMAYTGAKALTLEREVRQAVGQLRLKSGRSDLRPEDRTESMSCSDKLARWAVLGLQ-GRLLRRWLEPVLLSSVTVSADARAAPDAQR-AAMRRAICDRAAA 367
BLAST of mRNA_M-pyrifera_M_contig10274.590.1 vs. uniprot
Match: A0A6U5GYH6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5GYH6_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.150e-19 Identity = 120/396 (30.30%), Postives = 172/396 (43.43%), Query Frame = 1 Query: 10 VVTLATGNKCVGRDKIPED-----GSVVHDSHAEVLARRALMLRLWKELHFLIPAELLVEGTDMRTAARTKKRSCDGVVVGGXXXXXXXXXXXXXTVAVHAEVPTGSPVPSLSAPAGGDRLLLLLERSAGG-AWRLKPHLRLHLYISDPPCGDASIYEQQAQHRPESDGSSSSRSEAPPERSFGDKDPSHAGPRRVEEDATPVTVSDERGRSCDRVKRQRR-----AAAAVVESGGKCSSSLPPLSSPCRCPESTGDRGGCRDRAGGGXXXXXXXXXXXXRGADTMSFTGAKIITAVKEKGSVDGTFERRRDGEGRPAGELV-LRIDREQEQVLGALRIKSSRSNMSEEGRTMSMSCSDKLAKWAVLGLQQGGLLASWVE-PISLSSIVISADPRT 1158 VV+ ATG+KC G +I ++ G+V+HDSHAEVL RR L+L LWKE+ + E+ + G D + +K + D T E G L R L ++ + L+P L LHLYISD PCGDASIY+ ES + SS PER S A + +E+ + + + +RV+R++ A V+ +S ++ T D+ K+ K GS +GE L + RE Q++ ALR KS RSN+ E R++SMSCSDKL +W++LGLQ GGLL+ W+ PI+ SI++ DPRT Sbjct: 68 VVSCATGSKCTGLSRIGDNLNVCGGTVLHDSHAEVLCRRGLVLTLWKEVEEKLNREIRI-GKDWKK----EKETYDS------------------TGNFFLEKNCGKKRELLETDCSPARSKLENDQLGPSFQFSLRPELSLHLYISDSPCGDASIYKVGT----ESVENESSGYMGNPERHT----ESRALMKLDDENDGVNLLKRKLDENDERVERKKNLANFTGAKIVLSPATGITSENINITEEIHMSSKTN---------------------VGITSCDSSRNISPKVNVDKKLHGSTPYEDAYISNGEKVTKKSFCNLTLAREDTQIVSALRTKSGRSNLPEHLRSVSMSCSDKLCRWSLLGLQ-GGLLSRWIPFPITFKSILVGRDPRT 410
BLAST of mRNA_M-pyrifera_M_contig10274.590.1 vs. uniprot
Match: A0A1Z5K781_FISSO (Double stranded RNA-specific editase B n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K781_FISSO) HSP 1 Score: 89.4 bits (220), Expect = 4.510e-15 Identity = 102/401 (25.44%), Postives = 150/401 (37.41%), Query Frame = 1 Query: 10 VVTLATGNKCVGRDKIPEDGSVVHDSHAEVLARRALMLRLWKELHFLIPAELLVEGTDMRTAARTKKRSCDGVVVGGXXXXXXXXXXXXXTVAVHAEVPTGSPVPSLSAPAGGDRLLLLLERSAGGAWRLKPHLRLHLYISDPPCGDASIYEQQAQHRPESDGSSSSRSEAPPERSFGDKDPSHAGPRRVEEDATPVTVSDERGRSCDRVKRQRRAAAAVVESGGKCSSSLPPLSSPCRCPESTGDRGGCRDRAGGGXXXXXXXXXXXXRGADTMSFTGAKIITAVKEKGSVDGTFERRRDGEGRPAGELVLRIDREQE-QVLGALRIKSSRSNMSEEGRTMSMSCSDKLAKWAVLGLQQGGLLASWVEPISLSSIVISADPRTDGTAPLLAALARAVPRR 1209 VV ATG KC + G +VHD+HAEVL RR L+ LW E+ + T+ ++ ++R + + P+ + D+L +L RL+ +L+L++YISD PCGDASIY PV V+ + +S ++ +++ PP + FTGAK I + S D T G + + + RE + Q +G LR KS RSN+ R+ SMSCSDKL +W+VLGLQ L A +PI ++ IV+S DPR L A+ RA+P+R Sbjct: 7 VVCSATGTKCTAQRC---RGHIVHDAHAEVLVRRGLIRVLWHEI-------ISSSSTESSVSSTLRRRLLEHI-------------------------------PNQVSEDNNDQLTEML--------RLRKNLQLYMYISDSPCGDASIY--------------------------------------------PVRVNSDESKSDNK----------------SANNTYPP---------------------------------------SELLFTGAKAIVS-----SSDATKIAESSGPLLQSHNSLQHLVREPKAQFVGQLRSKSGRSNLESSRRSFSMSCSDKLVRWSVLGLQGQALSALIPQPIRITGIVVSVDPRALSVLEHLKAIERAIPQR 254
BLAST of mRNA_M-pyrifera_M_contig10274.590.1 vs. uniprot
Match: A0A1Z5KAH5_FISSO (tRNA-specific adenosine deaminase 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KAH5_FISSO) HSP 1 Score: 88.6 bits (218), Expect = 1.000e-14 Identity = 100/401 (24.94%), Postives = 149/401 (37.16%), Query Frame = 1 Query: 10 VVTLATGNKCVGRDKIPEDGSVVHDSHAEVLARRALMLRLWKELHFLIPAELLVEGTDMRTAARTKKRSCDGVVVGGXXXXXXXXXXXXXTVAVHAEVPTGSPVPSLSAPAGGDRLLLLLERSAGGAWRLKPHLRLHLYISDPPCGDASIYEQQAQHRPESDGSSSSRSEAPPERSFGDKDPSHAGPRRVEEDATPVTVSDERGRSCDRVKRQRRAAAAVVESGGKCSSSLPPLSSPCRCPESTGDRGGCRDRAGGGXXXXXXXXXXXXRGADTMSFTGAKIITAVKEKGSVDGTFERRRDGEGRPAGELVLRIDRE-QEQVLGALRIKSSRSNMSEEGRTMSMSCSDKLAKWAVLGLQQGGLLASWVEPISLSSIVISADPRTDGTAPLLAALARAVPRR 1209 VV ATG KC + G +VHD+HAEVL RR L+ LW E+ + + + ++R + + P+ ++ ++L + WRL+ L+L++YISD PCGDASIY PV V+D++ +S ++ +++ PP + FTGAK+I + S D T G + + RE Q Q +G LR KS RSN+ R+ SMSCSDKL +W+VLGLQ L +PI ++ IV+S DPR + A+ RA+P+R Sbjct: 48 VVCSATGTKCTAQRC---RGHIVHDAHAEVLVRRGLIRVLWHEI---------ISSSSGASMVTLRRRLLERI-------------------------------PNQTSEDNNNQLTEM--------WRLREKLQLYMYISDSPCGDASIY--------------------------------------------PVRVNDDKSKSDNK----------------STNNTHPP---------------------------------------SELLFTGAKVIVS-----SSDATEVAETGGPLLQSHNSQQHLVREPQAQSVGQLRSKSGRSNLESSRRSFSMSCSDKLVRWSVLGLQGQALSGLIPQPIRITGIVVSVDPRAVSVSEHQKAIERAIPQR 293
BLAST of mRNA_M-pyrifera_M_contig10274.590.1 vs. uniprot
Match: A0A7S3PX48_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PX48_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 3.250e-14 Identity = 105/383 (27.42%), Postives = 142/383 (37.08%), Query Frame = 1 Query: 67 GSVVHDSHAEVLARRALMLRLWKELHFLIPAELLVEGTDMRTAARTKKRSCDGVVVGGXXXXXXXXXXXXXTVAVHAEVPTGSPVPSLSAPAGGDRLLLLLERSAGG-----AWRLKPHLRLHLYISDPPCGDASIYEQQAQHRPESDGSSSSRSEAPPERSFGDKDPSHAGPRRVEEDATPVTVSDERGRSCDRVKRQRRAAAAVVESGGKCSSSLPPLSSPCRCPESTGDRGGCRDRAGGGXXXXXXXXXXXXRGADTMSFTGAKIIT----AVKEKG--SVDGTFERRRDGEGRPAGELVLR----IDREQEQVLGALRIKSSRSNMSEEGRTMSMSCSDKLAKWAVLGLQQGGLLASWVE-PISLSSIVISADPRTDGT 1167 G V+HDSHAE+LARR L+ LWKE+H + E EG R+ +C LL + +++GG + LK +++LHLYISD PCGDA+IY+ ++ GK S GG ++FTGAKII + K K S + TF G + + E+ R I RE+ Q+ ALR+KS RSN+ R SMSCSDKL KW++LGLQ G L+ ++ PI L+SIV+S DPRTD T Sbjct: 114 GFVLHDSHAEILARRGLIRTLWKEIHDDLDGE---EGEPRNGQIRS---NC---------------------------------------------LLQRITKTSGGKSTDLCYELKTNIQLHLYISDSPCGDATIYD-------------------------------------------------------------------ILSDYGKYLS-----------------EGG------------------------NVNFTGAKIIVPSECSKKRKAFESSNLTF----CGNVKSSKEVDKREMSFIARERLQITSALRLKSGRSNLPAHMRCSSMSCSDKLCKWSILGLQGSGFLSCLLKNPIRLTSIVVSKDPRTDAT 333
BLAST of mRNA_M-pyrifera_M_contig10274.590.1 vs. uniprot
Match: K0R2A8_THAOC (A to I editase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R2A8_THAOC) HSP 1 Score: 86.7 bits (213), Expect = 4.350e-14 Identity = 57/132 (43.18%), Postives = 86/132 (65.15%), Query Frame = 1 Query: 820 GADTMSFTGAKIITAVKEKGSVDGTFERRRDGEGRPAGELVLRIDREQEQVLGALRIKSSRSNMSEEGRTMSMSCSDKLAKWAVLGLQQGGLLASW-VEPISLSSIVISADPRT-DGTAPLLAALARAVPRR 1209 G ++FTGAKII + E+ + + P GE+ +R+ REQ Q++ LR+KSSRSN+ + R+MS+ C+DK+ +W+V GLQ G LL+ + +EPI+L+SI +S DPR+ DG LAAL R++ R Sbjct: 190 GKTEVNFTGAKIILSGGEEHQTTNITSLQEE----PEGEVKVRLGREQVQIVKKLRVKSSRSNIPNKMRSMSLCCADKIVRWSVFGLQ-GALLSKFLIEPITLTSICVSRDPRSVDGGQ--LAALNRSLVER 314
BLAST of mRNA_M-pyrifera_M_contig10274.590.1 vs. uniprot
Match: A0A7S3LDF6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LDF6_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.510e-13 Identity = 56/131 (42.75%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 832 MSFTGAKIITAVKEKGSVDGTFERRRDGEGRPAGELV-LRIDREQEQVLGALRIKSSRSNMSEEGRTMSMSCSDKLAKWAVLGLQQGGLLASWVEPISLSSIVISADPRT----DGTAPLLAALARAVPRR 1209 + FTGAK+I + + K SV G G A L R+ RE+ Q+LG LR KS RSN+ R+ S+SCSDK+ +W VLGLQ LL EPI LS+I++S D R T AL R++P R Sbjct: 29 LQFTGAKVIVSQETKVSVQDC------GGGSEASLLQDSRVARERVQLLGRLRTKSGRSNLQAHQRSDSLSCSDKIVRWCVLGLQGRALLHYLNEPIRLSTIIVSRDIRNHYHDSNTGAQWKALHRSIPNR 153
BLAST of mRNA_M-pyrifera_M_contig10274.590.1 vs. uniprot
Match: B7FPV9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPV9_PHATC) HSP 1 Score: 80.5 bits (197), Expect = 1.580e-12 Identity = 108/413 (26.15%), Postives = 140/413 (33.90%), Query Frame = 1 Query: 10 VVTLATGNKCVGRDKIPEDGSVVHDSHAEVLARRALMLRLWKELHFLIPAELLVEGTDMRTAARTKKRSCDGVVVGGXXXXXXXXXXXXXTVAVHAEVPTGSPVPSLSAPAGGDRLLLLLERSAGGAWRLKPHLRLHLYISDPPCGDASIYEQQAQHRPESDGSSSSRSEAPPERSFGDKDPSHAGPRRVEEDATPVTVSDERGRSCDRVKRQRRAAAAVVESGGKCSSSLPPLSSPCRCPESTGDRGGCRDRAGGGXXXXXXXXXXXXRGADTMSFTGAKIITAVKEKGSVDGTFERRRDGEGRPAGELVLR----------IDREQEQVLGALRIKSSRSNMSEEGRTMSMSCSDKLAKWAVLGLQQGGLLASWVE-PISLSSIVISADPRTDGTAPLLAALARAVPRRAA 1215 VV+ ATG KC G V+HDSHAEVLARR L+ LW E+ LI + + T K +SC LL + R++ L LHLYISD PCGDASIY + E+ VT + +TGAK+I V E V G +D G +L+L+ + RE Q+LG LR K+ RSN+ R+ SMSCSDK+ +W VLGLQ G L W++ PI ++IV+S DPR L AL RA+ R A Sbjct: 62 VVSCATGTKCTASQN-DRTGCVLHDSHAEVLARRGLVRSLWMEVAGLIHPPGVFDSTH-------KAKSC-----------------------------------------------LLEQDETTNKIRIRRDLLLHLYISDSPCGDASIYP-------------------------------------LVENEDDVTYE--------------------------------------------------------------------------LQYTGAKVI--VSEHTKVTG-----KDCGG--DHQLLLKSSSAIFSSSYVAREDVQLLGKLRTKAGRSNIEAARRSTSMSCSDKIVRWMVLGLQ-GRHLMKWIQDPIRFATIVVSQDPRVRQAQDQLDALERAISTRVA 298
BLAST of mRNA_M-pyrifera_M_contig10274.590.1 vs. uniprot
Match: A0A835YAN4_9CHLO (A to I editase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YAN4_9CHLO) HSP 1 Score: 82.0 bits (201), Expect = 2.090e-12 Identity = 113/414 (27.29%), Postives = 154/414 (37.20%), Query Frame = 1 Query: 4 LRVVTLATGNKCVGRDKIPEDGSVVHDSHAEVLARRALMLRLWKELHFLIPAELLVEGTDMRTAARTKKRSCDGVV-VGGXXXXXXXXXXXXXTVAVHAEVPTGS-PVPSLSAPAGGDRLLLLLERSAGGA------WRLKPHLRLHLYISDPPCGDASIYEQQAQHRPESDGSSSSRSEAPPERSF------GDKDPSHAGPRRVEEDATPVTVSDERGRSCDRVKRQRRAAAAVVESGGKCSSSLPPLSSPCRCPESTGDRGGCRDRAGGGXXXXXXXXXXXXRGADTMS---FTGAKIITAVKEKGSVDGTFERRRDGEGRPAGELVLRIDREQEQVLGALRIKSSRSNMSEEGRTMSMSCSDKLAKWAVLGLQQGGLLASWVE-PISLSSIVISADPRTDGTAPLLAALA 1191 L VV+L TG KC+G K G V+HDSHAE +ARRAL+ + E + A+ A CDG T A + P V AGGD AG A RL+P L L +Y+S PPCGD SI + R + G +A P S G P E P + A +GG ++S+ P + G + R G GA T S +G G + + AG++ + E + LGA+R K R + T S+SCSDKL++W LGLQ G LL+ +E P++L S+ + A P + A AALA Sbjct: 55 LLVVSLGTGTKCLGASKRTAQGGVLHDSHAEAVARRALLAWAYGEAELALAAQ-----------AGRGDSGCDGSSGPAKGASCPQPEAAAKATTAGSTKAPASVFEVVEAGPTAGGDETRSTEGAGAGLASPPRLRLRLRPGLVLLMYVSQPPCGDCSILHTAGEDRGQGQGQQGEALQAAPHGSTRACCASGGPGPQACASAPCEPGGAPHVAGH---------------SDAAASAGGVAAASVAPAAG-----------GSVKFRTGAKAIRLMAADGQAGAGASTGSPDALSGPAAAAGAGGAGVLVPVLPQ--------AGDVDVAAQ-EGGEALGAVRRKPGRGDA-----TPSLSCSDKLSRWCCLGLQ-GSLLSGILEAPLTLHSLAVGAPPGLEEAAGREAALA 416 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10274.590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10274.590.1 >prot_M-pyrifera_M_contig10274.590.1 ID=prot_M-pyrifera_M_contig10274.590.1|Name=mRNA_M-pyrifera_M_contig10274.590.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=740bp CLRVVTLATGNKCVGRDKIPEDGSVVHDSHAEVLARRALMLRLWKELHFLback to top mRNA from alignment at M-pyrifera_M_contig10274:875..10539- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10274.590.1 ID=mRNA_M-pyrifera_M_contig10274.590.1|Name=mRNA_M-pyrifera_M_contig10274.590.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9665bp|location=Sequence derived from alignment at M-pyrifera_M_contig10274:875..10539- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10274:875..10539- >mRNA_M-pyrifera_M_contig10274.590.1 ID=mRNA_M-pyrifera_M_contig10274.590.1|Name=mRNA_M-pyrifera_M_contig10274.590.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4440bp|location=Sequence derived from alignment at M-pyrifera_M_contig10274:875..10539- (Macrocystis pyrifera P11B4 male)back to top |