mRNA_M-pyrifera_M_contig102686.579.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102686.579.1 vs. uniprot
Match: A0A6B1AUV8_9ACTN (CoA transferase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AUV8_9ACTN) HSP 1 Score: 316 bits (810), Expect = 3.100e-100 Identity = 154/224 (68.75%), Postives = 180/224 (80.36%), Query Frame = 1 Query: 1 LMMERPDLMESEWADLRNRTARLDEWNAIVADWTTQHTVDEILERASELRVPVARVNNGASVLDEPHLVAREFLPEQAGGFAAPRSPRLIDGARPPLPGPAPSTGEHTERVEPRDRPAS------GTADAAARPLEGVRVIDLTSWWAGPSSTQVLAALGAEVIHVESVTHPDGMRLTGMLFGTDDWWEWGHMFVAANTDKQGITLDLTSDTGRDLLLRLVDSA 654 LM+ERPDLM+SEWADLR RTARLDEW+AIV +W QH+V EI+E ASELRVPVARVN+GA VL E HLVAR F + A GF APRSPR+IDG RPP+PGPAP+ GEH+ R+E R R S + D ARPL G+RV+DLTSWWAGP +TQ +AALGA+VIHVESVTHPDGMRLTGM+FG + WWEWGHMF+AAN DK+G+TLDL GR+LLL LV+ A Sbjct: 250 LMIERPDLMDSEWADLRTRTARLDEWSAIVNEWMAQHSVAEIVELASELRVPVARVNDGAGVLSEEHLVARGFFADTAEGFRAPRSPRMIDGERPPIPGPAPAIGEHSGRIESRPRLESVATTENASGDPTARPLTGIRVVDLTSWWAGPCATQAMAALGADVIHVESVTHPDGMRLTGMMFGKERWWEWGHMFLAANHDKRGLTLDLNDPQGRELLLSLVEGA 473
BLAST of mRNA_M-pyrifera_M_contig102686.579.1 vs. uniprot
Match: A0A6G2KRF0_9ACTN (CoA transferase n=6 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6G2KRF0_9ACTN) HSP 1 Score: 253 bits (647), Expect = 4.440e-76 Identity = 127/221 (57.47%), Postives = 158/221 (71.49%), Query Frame = 1 Query: 1 LMMERPDLMESEWADLRNRTARLDEWNAIVADWTTQHTVDEILERASELRVPVARVNNGASVLDEPHLVAREFLPEQAGGFAAPRSPRLID--GARPPLPGPAPSTGEHTERVEPRDRPASGTADAAAR-PLEGVRVIDLTSWWAGPSSTQVLAALGAEVIHVESVTHPDGMRLTGMLFGTDDWWEWGHMFVAANTDKQGITLDLTSDTGRDLLLRLVDSA 654 LM+ERPDL+++EW+ + R RLDEWNA+V WT++HTV EI++ AS+LRVPVA VN+G SVLD VAR GGF PR P L+D G R P PAP GEHT +E R RP AD + PL GV+V+DLTSWWAGPS+T LA LGA+VIH+ES HPDGMR+TG +FGT+DWWEW MFVA N +K+ +TLDL ++ G DLL RL++SA Sbjct: 275 LMIERPDLIDTEWSQIGERAGRLDEWNAMVHPWTSRHTVAEIVKAASDLRVPVAEVNDGRSVLDNEQFVARGAFVRNPGGFLQPRPPYLMDDGGERRPAT-PAPQLGEHTGTIEARPRPEPSAADGSHDLPLAGVKVLDLTSWWAGPSATGTLAMLGADVIHIESTGHPDGMRMTGFMFGTEDWWEWSSMFVAINPNKRDLTLDLDTEAGMDLLWRLIESA 494
BLAST of mRNA_M-pyrifera_M_contig102686.579.1 vs. uniprot
Match: A0A6I3C1I2_9ACTN (CoA transferase n=4 Tax=root TaxID=1 RepID=A0A6I3C1I2_9ACTN) HSP 1 Score: 227 bits (579), Expect = 2.120e-66 Identity = 116/220 (52.73%), Postives = 145/220 (65.91%), Query Frame = 1 Query: 1 LMMERPDLMESEWADLRNRTARLDEWNAIVADWTTQHTVDEILERASELRVPVARVNNGASVLDEPHLVAREFLPEQAGGFAAPRSPRLIDGARPPLPGPAPSTGEHTERVEPRDRPASGT--ADAAARPLEGVRVIDLTSWWAGPSSTQVLAALGAEVIHVESVTHPDGMRLTGMLFGTDDWWEWGHMFVAANTDKQGITLDLTSDTGRDLLLRLVDSA 654 LM+ERPDL++ AR EW I+A W +HTVDEI+E AS LR+PVA V +G+++L HL AR E GGF PR P +ID A P +P AP+ E + R P + AD + RPL G+RV+D+TSWWAGPSST LA +GAEVIHVES THPDGMR+TG +FG + WWEWGHMF AANTDK G+TLD++ GR L + L+ A Sbjct: 250 LMIERPDLLDDADLATFGGRARRPEWPGIMAAWMREHTVDEIVELASSLRIPVAPVLDGSNILQNEHLAARGVFVEHPGGFMQPRPPYVIDHAAPFVPQSAPALDEARGSLAARPTPVAAQPGADPSLRPLHGLRVLDMTSWWAGPSSTHFLALMGAEVIHVESTTHPDGMRMTGYMFGHEKWWEWGHMFAAANTDKLGVTLDISKPEGRALCVELMQWA 469
BLAST of mRNA_M-pyrifera_M_contig102686.579.1 vs. uniprot
Match: A0A7Y2GL36_9ACTN (CoA transferase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GL36_9ACTN) HSP 1 Score: 221 bits (562), Expect = 8.160e-64 Identity = 119/223 (53.36%), Postives = 152/223 (68.16%), Query Frame = 1 Query: 1 LMMERPDLMESE-WADLRNRTARLDEWNAIVADWTTQHTVDEILERASELRVPVARVNNGASVLDEPHLVARE-FLPEQAGGFAAPRSPRLIDGARPPLPGPAPSTGEHTE--RVEPRDRPAS-GTADAAARPLEGVRVIDLTSWWAGPSSTQVLAALGAEVIHVESVTHPDGMRLTGMLFGTDDWWEWGHMFVAANTDKQGITLDLTSDTGRDLLLRLVDSA 654 L++ERPDL+ E A + R AR+DE+ IVA WTT+HTV EILE+A+ELR+P A+V+ ++LD+ LVAR F+P GGF PR P IDG GP P+ G H V+ R A+ A + PL G++V+DLTSWWAGPSST VLA LGA+V+HVES +H DGMRLTG +GT DWWEWGHMFVAANT+K+G+TLDL G ++ L+ A Sbjct: 267 LLIERPDLLADESLATFQGRQARIDEFREIVAAWTTRHTVAEILEKAAELRIPCAQVHTAQTMLDDEQLVARSVFVPNPTGGFQQPRRPYAIDGDFGTF-GPVPALGRHDPPPSVDRSTRAATMPPAPSGPLPLAGLKVVDLTSWWAGPSSTHVLAMLGADVLHVESTSHADGMRLTGYAYGTADWWEWGHMFVAANTNKRGVTLDLKQAGGLAMVKELIAEA 488
BLAST of mRNA_M-pyrifera_M_contig102686.579.1 vs. uniprot
Match: A0A2E5YSW3_9DELT (CoA transferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E5YSW3_9DELT) HSP 1 Score: 216 bits (551), Expect = 2.410e-62 Identity = 113/222 (50.90%), Postives = 153/222 (68.92%), Query Frame = 1 Query: 1 LMMERPDLM-ESEWADLRNRTARLDEWNAIVADWTTQHTVDEILERASELRVPVARVNNGASVLDEPHLVARE-FLPEQAGGFAAPRSPRLIDGARPPLPGPAPSTGEHTERVEPRDRPASGTADAAAR----PLEGVRVIDLTSWWAGPSSTQVLAALGAEVIHVESVTHPDGMRLTGMLFGTD-DWWEWGHMFVAANTDKQGITLDLTSDTGRDLLLRLV 645 L++ERPDL+ E+EWA ++ R AR+DEWN IV WTTQHT E++ERAS LR+PVA VN+G +V D HL R F GGF PR P L+D P P GEHT+ +EPR RP +GT +AA PL G+RV+D T+WWAGPS+ Q+LA+LGA+VI VE++ PDGMR+ G +F ++ +WWE + ++ANT+K+G+TL+LT TG +L L+ Sbjct: 251 LLIERPDLLAETEWAMMQTRMARMDEWNEIVRAWTTQHTTAEVVERASLLRIPVAPVNSGKTVFDHVHLQERGVFKKNPTGGFLQPRPPYLLDNEGPRPFEAVPEIGEHTDAIEPRMRPKAGTTPSAAAKPNLPLAGIRVLDTTAWWAGPSACQMLASLGADVIKVEAIQRPDGMRMAGGMFISESEWWERSAITLSANTNKRGLTLNLTDPTGLELCKELI 472
BLAST of mRNA_M-pyrifera_M_contig102686.579.1 vs. uniprot
Match: A0A2E3NM27_9DELT (CoA transferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E3NM27_9DELT) HSP 1 Score: 214 bits (544), Expect = 2.390e-61 Identity = 114/225 (50.67%), Postives = 154/225 (68.44%), Query Frame = 1 Query: 1 LMMERPDLME-SEWADLRNRTARLDEWNAIVADWTTQHTVDEILERASELRVPVARVNNGASVLDEPHLVARE-FLPEQAGGFAAPRSPRLIDGARPPLPGPAPSTGEHTERVEPRDRPASGTADAAAR----PLEGVRVIDLTSWWAGPSSTQVLAALGAEVIHVESVTHPDGMRLTGMLFGTD-DWWEWGHMFVAANTDKQGITLDLTSDTGRDLLLRLVDSA 654 L++ERPDL+E +EWA + R AR+DEWN IV WTTQHT +EI+ERAS LR+PVA V +G +VLD HL R F GGF PRSP L+DG P P P+ GEH + +E R+R G + + A PL+G+RVID T+WWAGPS+ Q+LA LGA+VI VE++ PDGMR+ G LF + DWWE + +AANT+K+G+TL+L+ G ++ +L++ A Sbjct: 250 LLIERPDLLEDTEWAMIGTRMARMDEWNEIVRSWTTQHTTEEIVERASLLRIPVAPVCSGRTVLDHIHLKERGVFKTNPTGGFQQPRSPYLMDGEEPRPFEPVPTLGEHQDAIESRERLKPGISPSGASDPDLPLKGIRVIDTTAWWAGPSACQMLANLGADVIKVEAIQRPDGMRMMGGLFIAEGDWWERSAITLAANTNKRGLTLNLSDPKGLEICKKLIEEA 474
BLAST of mRNA_M-pyrifera_M_contig102686.579.1 vs. uniprot
Match: A0A7I7NY04_9MYCO (CoA transferase n=1 Tax=Mycobacterium seoulense TaxID=386911 RepID=A0A7I7NY04_9MYCO) HSP 1 Score: 209 bits (533), Expect = 8.870e-60 Identity = 113/222 (50.90%), Postives = 145/222 (65.32%), Query Frame = 1 Query: 1 LMMERPDLMESE--WADLRNRTARLDEWNAIVADWTTQHTVDEILERASELRVPVARVNNGASVLDEPHLVAREFLPEQA-GGFAAPRSPRLIDGARP-PLPGPAPSTGE-HTERVEPRDRPASGTADAAARPLEGVRVIDLTSWWAGPSSTQVLAALGAEVIHVESVTHPDGMRLTGMLF-GTDDWWEWGHMFVAANTDKQGITLDLTSDTGRDLLLRLVD 648 LM+ER DL+E + WA R R++EWN IV DWTT+HT +EI++ AS LR+PVA+VNNG +VLD PH AR A G F P P IDG RP P PAP GE + + + R A + PL G+R+ID T+WWAGPSST +LAALGA+V+H+ES+ HPDG R+T F WWE MF+A NT+KQG+TLDL+S GR++ RLV+ Sbjct: 249 LMIERYDLLEEDPAWALAPTRYERMEEWNKIVRDWTTRHTTEEIVDLASALRIPVAQVNNGQTVLDHPHFNARGVWSVSADGSFTHPLPPYRIDGTRPGSRPKPAPRLGELNVVELPAKPRQPDTARSAGSLPLAGIRIIDATAWWAGPSSTHILAALGADVMHLESIQHPDGARMTAAAFIDQPSWWERSAMFLATNTNKQGLTLDLSSARGREVFFRLVE 470
BLAST of mRNA_M-pyrifera_M_contig102686.579.1 vs. uniprot
Match: A0A1X1ZJN5_9MYCO (Cag pathogenicity island protein n=5 Tax=Mycobacterium TaxID=1763 RepID=A0A1X1ZJN5_9MYCO) HSP 1 Score: 208 bits (529), Expect = 3.290e-59 Identity = 113/222 (50.90%), Postives = 144/222 (64.86%), Query Frame = 1 Query: 1 LMMERPDLMESE--WADLRNRTARLDEWNAIVADWTTQHTVDEILERASELRVPVARVNNGASVLDEPHLVAREFLPEQA-GGFAAPRSPRLIDGARPPLPG-PAPSTGE-HTERVEPRDRPASGTADAAARPLEGVRVIDLTSWWAGPSSTQVLAALGAEVIHVESVTHPDGMRLTGMLF-GTDDWWEWGHMFVAANTDKQGITLDLTSDTGRDLLLRLVD 648 LM+ER DL+E + WA R R++EWN IV DWTT+HT +EI+E AS LR+PVA+VNNG +VLD PH AR A G F P P I G RP PAP GE + + R T + PL G+RVID T+WWAGPSS+ +LAALGA+VIH+ES+ HPDG R+T F +WWE MF+A NT+K+G+TLDL+S+ GR+L RLV+ Sbjct: 249 LMIERDDLLEEDAAWALAPTRYERMEEWNKIVRDWTTRHTTEEIVELASALRIPVAQVNNGRTVLDHPHFAARGVWSVSADGSFTYPLPPYRIAGMRPGSRSKPAPRLGELDASELPAKPRKTEVTQSTVSLPLAGIRVIDATAWWAGPSSSHILAALGADVIHLESIQHPDGARMTAAAFIDQPNWWERSAMFLATNTNKKGLTLDLSSEKGRELFFRLVE 470
BLAST of mRNA_M-pyrifera_M_contig102686.579.1 vs. uniprot
Match: A0A2D6MZE2_9DELT (CoA transferase (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6MZE2_9DELT) HSP 1 Score: 204 bits (520), Expect = 6.230e-59 Identity = 111/232 (47.84%), Postives = 150/232 (64.66%), Query Frame = 1 Query: 1 LMMERPDLM-ESEWADLRNRTARLDEWNAIVADWTTQHTVDEILERASELRVPVARVNNGASVLDEPHLVARE-FLPEQAGGFAAPRSPRLIDGARPPLPGPAPSTGEHTERV---EPRDRPASGTADAAAR--------PLEGVRVIDLTSWWAGPSSTQVLAALGAEVIHVESVTHPDGMRLTGMLFGT-DDWWEWGHMFVAANTDKQGITLDLTSDTGRDLLLRLVDSA 654 L++ERPDL E EW+ + R AR+DEWN IV WT+QHT EI+ERAS LR+PVA VN+G +V D HL R F+ G F PR P L+DG P P P+ G+H + +PR RP G + +AAR PLEG+ VID T+WWAGPS+ Q+L +LGA+VI +E++ PDGMR+ G LF T +WWE + +AANT+K+GITL+L G ++ +L++ A Sbjct: 74 LLIERPDLQAEPEWSQIMTRMARMDEWNEIVRSWTSQHTTAEIVERASLLRIPVAPVNSGKTVFDHVHLQERGVFVENPTGHFMQPRPPYLMDGQGPRAFEPVPAIGKHGAELRASKPRKRPVPGKSPSAARSEGGHPKLPLEGITVIDTTAWWAGPSACQMLGSLGADVIKIEAIQRPDGMRMAGGLFFTLPEWWERSAITLAANTNKRGITLNLADPKGLEVCRKLIEKA 305
BLAST of mRNA_M-pyrifera_M_contig102686.579.1 vs. uniprot
Match: A0A538CU39_9ACTN (CoA transferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538CU39_9ACTN) HSP 1 Score: 206 bits (525), Expect = 1.010e-58 Identity = 111/219 (50.68%), Postives = 146/219 (66.67%), Query Frame = 1 Query: 1 LMMERPDLM-ESEWADLRNRTARLDEWNAIVADWTTQHTVDEILERASELRVPVARVNNGASVLDEPHLVARE-FLPEQAGGFAAPRSPRLIDGARPPLPGPAPSTGEHTERVEPRDRPASGTADAA-ARPLEGVRVIDLTSWWAGPSSTQVLAALGAEVIHVESVTHPDGMRLTGMLFGTDD-WWEWGHMFVAANTDKQGITLDLTSDTGRDLLLRLV 645 L++ERPDL+ + E A R WN IV +WT + T EI+ RASELR+PVA V++G +V+D VAR ++ + G F PR P ID PP P PAP GEHT R+E R + A AA A PL+GVRV+DLT+WWAGP + ++AALGA+VIHVES + PDGMR+TG +FG D WWE ++A+NT+K+G+TLDLT G DLL +L+ Sbjct: 235 LLIERPDLLGDEELARAPGRQKHWARWNEIVHEWTRKFTTAEIVRRASELRIPVAPVHSGENVMDAEQFVARGVYIDDPTGSFKMPRCPWSIDNEDPPPPRPAPRAGEHTGRIETRQPTRAARATAAKALPLDGVRVLDLTAWWAGPIAAGMIAALGADVIHVESTSRPDGMRMTGAMFGMDGPWWERSGHYLASNTNKRGLTLDLTKPRGLDLLKQLI 453 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102686.579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102686.579.1 >prot_M-pyrifera_M_contig102686.579.1 ID=prot_M-pyrifera_M_contig102686.579.1|Name=mRNA_M-pyrifera_M_contig102686.579.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp MMERPDLMESEWADLRNRTARLDEWNAIVADWTTQHTVDEILERASELRVback to top mRNA from alignment at M-pyrifera_M_contig102686:1..654- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102686.579.1 ID=mRNA_M-pyrifera_M_contig102686.579.1|Name=mRNA_M-pyrifera_M_contig102686.579.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig102686:1..654- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102686:1..654- >mRNA_M-pyrifera_M_contig102686.579.1 ID=mRNA_M-pyrifera_M_contig102686.579.1|Name=mRNA_M-pyrifera_M_contig102686.579.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig102686:1..654- (Macrocystis pyrifera P11B4 male)back to top |