mRNA_M-pyrifera_M_contig102548.549.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102548.549.1 vs. uniprot
Match: W4G6I6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G6I6_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.550e-30 Identity = 61/130 (46.92%), Postives = 79/130 (60.77%), Query Frame = 1 Query: 13 PAVVV-RPKSVTCYICGRDYGTASFGIHVDQCKKLFLAREARKPKXXXXXXXXXXXXXXXXXXXEGRDLTS--MTAEELDAMNAAAFDTYNTKALVSCPYCGRTFLPEKLAIHNRSCTADKPAKRVGAKR 393 PAV+ RPK TCY+CGRDYG +SF IH+ QCK++++A+E KP G +S +T E+L+A N AA + K + CPYCGRTF PE+LAIHNRSCTA+ PAK +G R Sbjct: 3 PAVLAKRPKVRTCYVCGRDYGFSSFEIHLKQCKQMWIAQEELKPLRERRPVPEPPPTLLVATEGGGDAPSSYDLTPEQLEAQNRAAQQAFENKVMEKCPYCGRTFNPERLAIHNRSCTAEHPAKAIGQAR 132
BLAST of mRNA_M-pyrifera_M_contig102548.549.1 vs. uniprot
Match: A0A6G0WSX5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSX5_9STRA) HSP 1 Score: 117 bits (292), Expect = 4.550e-30 Identity = 58/126 (46.03%), Postives = 75/126 (59.52%), Query Frame = 1 Query: 16 AVVVRPKSVTCYICGRDYGTASFGIHVDQCKKLFLAREARKPKXXXXXXXXXXXXXXXXXXXEGRDLTSMTAEELDAMNAAAFDTYNTKALVSCPYCGRTFLPEKLAIHNRSCTADKPAKRVGAKR 393 AV +PK TCY+CGR+YG +SF IH+ QCK+L++A+E +KP + +T EEL+A N AA + K + C +CGRTF PE+LAIHNRSCTAD PAK VG R Sbjct: 3 AVAKKPKVRTCYVCGREYGLSSFEIHLKQCKQLWIAQEEKKP----LKERKPVPEPPTVLNDSDKSSYDLTPEELEAQNRAAAQAFEQKVMEKCQFCGRTFNPERLAIHNRSCTADNPAKAVGQAR 124
BLAST of mRNA_M-pyrifera_M_contig102548.549.1 vs. uniprot
Match: A0A1V9Z3G1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3G1_9STRA) HSP 1 Score: 116 bits (290), Expect = 5.500e-30 Identity = 58/127 (45.67%), Postives = 76/127 (59.84%), Query Frame = 1 Query: 13 PAVVVRPKSVTCYICGRDYGTASFGIHVDQCKKLFLAREARKPKXXXXXXXXXXXXXXXXXXXEGRDLTSMTAEELDAMNAAAFDTYNTKALVSCPYCGRTFLPEKLAIHNRSCTADKPAKRVGAKR 393 PA V RPK CY+CGR+YG +S IHV QCK L++A+E +KP E L ++ +EL+A+N AA + K + C +CGRTF PE+LAIHNRSCTA+KPA+ VG R Sbjct: 47 PATVRRPKVKLCYVCGREYGLSSIEIHVKQCKLLWIAQEEKKPPRERRPVPEPPHEVAL----EANVLYQLSPDELEALNRAAAKAFEDKVMEKCAFCGRTFNPERLAIHNRSCTAEKPARAVGTAR 169
BLAST of mRNA_M-pyrifera_M_contig102548.549.1 vs. uniprot
Match: A0A024TQV1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQV1_9STRA) HSP 1 Score: 114 bits (285), Expect = 7.440e-29 Identity = 54/122 (44.26%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 28 RPKSVTCYICGRDYGTASFGIHVDQCKKLFLAREARKPKXXXXXXXXXXXXXXXXXXXEGRDLTSMTAEELDAMNAAAFDTYNTKALVSCPYCGRTFLPEKLAIHNRSCTADKPAKRVGAKR 393 RPK TCY+CGRDYG +S+ IH+ QCK+L++A+E KP + +T E+L+A N AA + K + C +CGRTF PE+LAIHNRSCTA+ PAK +G R Sbjct: 9 RPKVRTCYVCGRDYGLSSYEIHLKQCKQLWIAQEELKPLKERRPVPEPPHALVSSECGDVPSAYDLTPEQLEAQNRAAQQAFENKVMEKCAFCGRTFNPERLAIHNRSCTAEHPAKAIGQAR 130
BLAST of mRNA_M-pyrifera_M_contig102548.549.1 vs. uniprot
Match: A0A1W0A3F6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3F6_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.100e-28 Identity = 56/121 (46.28%), Postives = 74/121 (61.16%), Query Frame = 1 Query: 31 PKSVTCYICGRDYGTASFGIHVDQCKKLFLAREARKPKXXXXXXXXXXXXXXXXXXXEGRDLTSMTAEELDAMNAAAFDTYNTKALVSCPYCGRTFLPEKLAIHNRSCTADKPAKRVGAKR 393 PK CY+CGR+YG +SF IH+ QCK+LF+A+E RKP + L ++ EEL+A N AA T+ K + C +CGRTF PE+LAIHNRSCTA++PA+ VG R Sbjct: 53 PKVRVCYVCGREYGLSSFEIHLKQCKQLFIAQEERKP--LRERKPLPEPPNELVEITDATVLYKLSPEELEAQNRAAAKTFENKVMEKCAFCGRTFNPERLAIHNRSCTAERPARAVGTAR 171
BLAST of mRNA_M-pyrifera_M_contig102548.549.1 vs. uniprot
Match: T0R1F0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R1F0_SAPDV) HSP 1 Score: 112 bits (279), Expect = 4.440e-27 Identity = 55/122 (45.08%), Postives = 73/122 (59.84%), Query Frame = 1 Query: 28 RPKSVTCYICGRDYGTASFGIHVDQCKKLFLAREARKPKXXXXXXXXXXXXXXXXXXXEGRDLTSMTAEELDAMNAAAFDTYNTKALVSCPYCGRTFLPEKLAIHNRSCTADKPAKRVGAKR 393 RPK CY+CGR+YG +SF IH+ QCK L++A+E +KP E L ++ +EL+A N AA + K + C YCGRTF PE+LAIHNRSCTA++PA+ VG R Sbjct: 46 RPKVRLCYVCGREYGLSSFEIHLKQCKLLWIAQEEKKP----LRERRPVPEPPQELPIEANVLYQLSPDELEAQNRAAARAFEEKVMEKCAYCGRTFNPERLAIHNRSCTAERPARAVGTAR 163
BLAST of mRNA_M-pyrifera_M_contig102548.549.1 vs. uniprot
Match: A0D772_PARTE (Uncharacterized protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0D772_PARTE) HSP 1 Score: 110 bits (276), Expect = 1.060e-25 Identity = 54/121 (44.63%), Postives = 72/121 (59.50%), Query Frame = 1 Query: 25 VRPKSVTCYICGRDYGTASFGIHVDQCKKLFLAREARKPKXXXXXXXXXXXXXXXXXXXEGRDLTSMTAEELDAMNAAAFDTYNTKALVSCPYCGRTFLPEKLAIHNRSCTADKPAKRVGA 387 VRPK++ CYICGR+YGT S GIH+ QCK++F+ +E +KPK E +T E++ A N AF+ YN +ALV+C CGRTF PE L H ++CTAD P K + A Sbjct: 159 VRPKTLVCYICGREYGTKSLGIHIPQCKEMFIVQEMKKPKAERRNPPTTPRGLWDLLNKE-----DITMEDIIAYNNGAFNKYNKEALVACKNCGRTFKPEALEHHIKACTADNPFKALDA 274
BLAST of mRNA_M-pyrifera_M_contig102548.549.1 vs. uniprot
Match: A0A0G4FKR9_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FKR9_VITBC) HSP 1 Score: 108 bits (271), Expect = 4.770e-25 Identity = 58/116 (50.00%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 28 RPKSVTCYICGRDYGTASFGIHVDQCKKLFLAREARKPKXXXXXXXXXXXXXXXXXXXEGRDLTSMTAEELDAMNAAAFDTYNTKALVSCPYCGRTFLPEKLAIHNRSCTADKPAK 375 P SVTCYICGR +GTAS IH+ QC K + +EA KPK G D +MTAEE +A N AA + +NT+ LV+CP CGRTFLP++L IH RSC A PAK Sbjct: 164 EPPSVTCYICGRKFGTASISIHLPQCAKKWEQQEALKPKHERRPVPKPPEAEKAI----GAD--AMTAEEREAYNVAAQEKFNTEGLVACPNCGRTFLPDRLEIHLRSCKASNPAK 273
BLAST of mRNA_M-pyrifera_M_contig102548.549.1 vs. uniprot
Match: A0A813BPQ5_9DINO (ZNF474 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BPQ5_9DINO) HSP 1 Score: 103 bits (258), Expect = 5.510e-24 Identity = 53/124 (42.74%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 31 PKSVTCYICGRDYGTASFGIHVDQCKKLFLAREARKP-----KXXXXXXXXXXXXXXXXXXXEGRDLTSMTAEELDAMNAAAFDTYNTKALVSCPYCGRTFLPEKLAIHNRSCTADKPAKRVGA 387 P+SVTCYICGR +GTAS IH+ QCK F+ ++ P K + MTA +L+A+N AA+DTYN++A+ C CGRTFLP++L IH RSC AK V A Sbjct: 90 PRSVTCYICGRGFGTASIDIHIPQCKTKFIQQQKLLPPGQRKKLPQPPQLATAGAAALDASGAPVKASEMTAAQLEALNQAAYDTYNSEAMSKCDVCGRTFLPDRLIIHQRSCKPGNAAKSVAA 213
BLAST of mRNA_M-pyrifera_M_contig102548.549.1 vs. uniprot
Match: A0DJP9_PARTE (Uncharacterized protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0DJP9_PARTE) HSP 1 Score: 105 bits (261), Expect = 1.110e-23 Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = 1 Query: 28 RPKSVTCYICGRDYGTASFGIHVDQCKKLFLAREARKPKXXXXXXXXXXXXXXXXXXXEGRDLTSMTAEELDAMNAAAFDTYNTKALVSCPYCGRTFLPEKLAIHNRSCTADKPAK 375 RPK++ CYICGR+YG+ S GIH+ QCK++F+ +E +KPK E +T E++ A N AF+ YN +ALV+C CGRTF PE L H ++CTA+ P K Sbjct: 160 RPKTLVCYICGREYGSKSLGIHIPQCKEMFMVQEMKKPKGERRNPPTTPRGLWDLLNKE-----EITMEDIMAYNNGAFNKYNKEALVACKNCGRTFKPEALEHHIKACTAENPFK 270 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102548.549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102548.549.1 >prot_M-pyrifera_M_contig102548.549.1 ID=prot_M-pyrifera_M_contig102548.549.1|Name=mRNA_M-pyrifera_M_contig102548.549.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=131bp MAAAPAVVVRPKSVTCYICGRDYGTASFGIHVDQCKKLFLAREARKPKKEback to top mRNA from alignment at M-pyrifera_M_contig102548:35..427+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102548.549.1 ID=mRNA_M-pyrifera_M_contig102548.549.1|Name=mRNA_M-pyrifera_M_contig102548.549.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=393bp|location=Sequence derived from alignment at M-pyrifera_M_contig102548:35..427+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102548:35..427+ >mRNA_M-pyrifera_M_contig102548.549.1 ID=mRNA_M-pyrifera_M_contig102548.549.1|Name=mRNA_M-pyrifera_M_contig102548.549.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig102548:35..427+ (Macrocystis pyrifera P11B4 male)back to top |