mRNA_M-pyrifera_M_contig102535.545.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102535.545.1 vs. uniprot
Match: A0A6P3VMR1_CLUHA (Thioredoxin n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3VMR1_CLUHA) HSP 1 Score: 107 bits (267), Expect = 1.350e-28 Identity = 47/79 (59.49%), Postives = 60/79 (75.95%), Query Frame = 1 Query: 1 FHAVWCGPCKAIAPFVSELSEKYTDVTFVKVDVDELPDVAQEADVTAMPTFAFYKGGEKIAEMVGAKKERLEELVQQHK 237 F A WCGPC++IAPF LSEKY DV F+KVDVD+ DVAQE D+ MPTF FYK G+K+ + G+ +E+LEE+V +HK Sbjct: 27 FTATWCGPCQSIAPFFKSLSEKYKDVVFLKVDVDDAQDVAQECDIKCMPTFHFYKNGKKVDDFSGSNREKLEEMVTKHK 105
BLAST of mRNA_M-pyrifera_M_contig102535.545.1 vs. uniprot
Match: A0A0L0FHJ9_9EUKA (Thioredoxin n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FHJ9_9EUKA) HSP 1 Score: 107 bits (266), Expect = 2.280e-28 Identity = 47/78 (60.26%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 1 FHAVWCGPCKAIAPFVSELSEKYTDVTFVKVDVDELPDVAQEADVTAMPTFAFYKGGEKIAEMVGAKKERLEELVQQH 234 F AVWCGPCK IAPF+ EL K+ DV F+KVDVDEL ++A E +TAMPTF FY+ G+K+AE+ GA K +LE+L+ H Sbjct: 25 FFAVWCGPCKMIAPFLEELDAKFADVDFIKVDVDELEELAGECGITAMPTFQFYRDGKKVAEVKGANKAKLEDLISAH 102
BLAST of mRNA_M-pyrifera_M_contig102535.545.1 vs. uniprot
Match: UPI001C08D9DE (thioredoxin-like n=2 Tax=Alosa TaxID=34772 RepID=UPI001C08D9DE) HSP 1 Score: 105 bits (263), Expect = 5.480e-28 Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 1 FHAVWCGPCKAIAPFVSELSEKYTDVTFVKVDVDELPDVAQEADVTAMPTFAFYKGGEKIAEMVGAKKERLEELV 225 F A WCGPC++IAPF LS+KYTDV F+KVDVD+ PDVAQE ++ MPTF FYK G+K+ E G+ +E+LEE V Sbjct: 27 FTATWCGPCQSIAPFFQSLSQKYTDVVFLKVDVDDTPDVAQECEIKCMPTFHFYKNGKKVDEFSGSNREKLEEKV 101
BLAST of mRNA_M-pyrifera_M_contig102535.545.1 vs. uniprot
Match: UPI00038A5F66 (LECA THIOREDOXIN n=1 Tax=synthetic construct TaxID=32630 RepID=UPI00038A5F66) HSP 1 Score: 104 bits (259), Expect = 2.290e-27 Identity = 46/79 (58.23%), Postives = 63/79 (79.75%), Query Frame = 1 Query: 1 FHAVWCGPCKAIAPFVSELSEKYTD-VTFVKVDVDELPDVAQEADVTAMPTFAFYKGGEKIAEMVGAKKERLEELVQQH 234 F A WCGPCK IAPF ELSE+Y D V F+KVDVDE+PDVA + +T+MPTF F+K G+K+ E+VGA +E+L++++ +H Sbjct: 26 FFATWCGPCKMIAPFFEELSEEYPDKVVFIKVDVDEVPDVAAKYGITSMPTFKFFKNGKKVDELVGANQEKLKQMILKH 104
BLAST of mRNA_M-pyrifera_M_contig102535.545.1 vs. uniprot
Match: M7NVF6_PNEMU (Thioredoxin n=1 Tax=Pneumocystis murina (strain B123) TaxID=1069680 RepID=M7NVF6_PNEMU) HSP 1 Score: 103 bits (256), Expect = 6.020e-27 Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 1 Query: 1 FHAVWCGPCKAIAPFVSELSEKYTDVTFVKVDVDELPDVAQEADVTAMPTFAFYKGGEKIAEMVGAKKERLEELV 225 F A WCGPC+AIAP + ELSEKYT + F+KVDVD+ D+A E ++TAMPTF F+KGG KIAE+VGA ++EE + Sbjct: 25 FFATWCGPCRAIAPKIEELSEKYTGILFLKVDVDQHNDLASEYNITAMPTFLFFKGGIKIAEVVGASSSKVEETI 99
BLAST of mRNA_M-pyrifera_M_contig102535.545.1 vs. uniprot
Match: A0A6A6Q6S6_9PEZI (Thioredoxin n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6Q6S6_9PEZI) HSP 1 Score: 103 bits (256), Expect = 6.190e-27 Identity = 47/76 (61.84%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 7 AVWCGPCKAIAPFVSELSEKYTDVTFVKVDVDELPDVAQEADVTAMPTFAFYKGGEKIAEMVGAKKERLEELVQQH 234 A WCGPCKAIAP V + S +YTD F K+DVDELP+VAQ+ V AMPTF +K GEK+AE+VGA + LE+ +QQH Sbjct: 28 ATWCGPCKAIAPQVVKFSGQYTDARFYKIDVDELPEVAQDLSVRAMPTFMLFKDGEKVAEVVGANPKALEQAIQQH 103
BLAST of mRNA_M-pyrifera_M_contig102535.545.1 vs. uniprot
Match: A0A507E1E9_9FUNG (Thioredoxin n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E1E9_9FUNG) HSP 1 Score: 102 bits (255), Expect = 8.790e-27 Identity = 45/78 (57.69%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 1 FHAVWCGPCKAIAPFVSELSEKYTDVTFVKVDVDELPDVAQEADVTAMPTFAFYKGGEKIAEMVGAKKERLEELVQQH 234 FHA WCGPCK IAP E S+KY F+K+DVDE+PDVA++A V++MPTF YK GEKIAE+VGA +LE ++++ Sbjct: 25 FHATWCGPCKMIAPKFEEFSKKYDKAVFIKIDVDEVPDVAEQAGVSSMPTFLIYKNGEKIAEVVGANPTKLETEIKKY 102
BLAST of mRNA_M-pyrifera_M_contig102535.545.1 vs. uniprot
Match: B6K874_SCHJY (Thioredoxin n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K874_SCHJY) HSP 1 Score: 102 bits (254), Expect = 1.210e-26 Identity = 47/78 (60.26%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 1 FHAVWCGPCKAIAPFVSELSEKYTDVTFVKVDVDELPDVAQEADVTAMPTFAFYKGGEKIAEMVGAKKERLEELVQQH 234 F A WCGPCKAIAP V +LS+ YTD TF KVDV+EL +VA A+V AMPTF FYK G+K+A++VGA +LE ++Q+ Sbjct: 25 FFATWCGPCKAIAPKVDQLSKTYTDATFYKVDVEELSEVAVTANVQAMPTFVFYKAGQKVADVVGANPAKLEATIKQN 102
BLAST of mRNA_M-pyrifera_M_contig102535.545.1 vs. uniprot
Match: A0A162NF38_PHYB8 (Thioredoxin n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162NF38_PHYB8) HSP 1 Score: 102 bits (254), Expect = 1.320e-26 Identity = 42/75 (56.00%), Postives = 57/75 (76.00%), Query Frame = 1 Query: 1 FHAVWCGPCKAIAPFVSELSEKYTDVTFVKVDVDELPDVAQEADVTAMPTFAFYKGGEKIAEMVGAKKERLEELV 225 FHAVWCGPCK I P +LS+ YTD+ F K+DV+E+PDVA + ++ AMPTF FYK G+K+ E++GA +LEE + Sbjct: 27 FHAVWCGPCKVIGPKFEKLSDTYTDIVFAKIDVEEVPDVASDVNIRAMPTFLFYKDGQKVGEVIGASLPKLEEQL 101
BLAST of mRNA_M-pyrifera_M_contig102535.545.1 vs. uniprot
Match: A0A507DEZ8_9FUNG (Thioredoxin domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DEZ8_9FUNG) HSP 1 Score: 102 bits (254), Expect = 2.400e-26 Identity = 43/78 (55.13%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 1 FHAVWCGPCKAIAPFVSELSEKYTDVTFVKVDVDELPDVAQEADVTAMPTFAFYKGGEKIAEMVGAKKERLEELVQQH 234 F+A WCGPCKAI+PF + +SEK+ ++KVDVDE+PDVA++A + AMPTF YK G+KI+E+VGA ++LE ++ +H Sbjct: 49 FYATWCGPCKAISPFFAAMSEKFPGAEYIKVDVDEVPDVAEKAGIKAMPTFHAYKAGKKISELVGADPKKLEAMIAKH 126 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102535.545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102535.545.1 >prot_M-pyrifera_M_contig102535.545.1 ID=prot_M-pyrifera_M_contig102535.545.1|Name=mRNA_M-pyrifera_M_contig102535.545.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=80bp FHAVWCGPCKAIAPFVSELSEKYTDVTFVKVDVDELPDVAQEADVTAMPTback to top mRNA from alignment at M-pyrifera_M_contig102535:3..242+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102535.545.1 ID=mRNA_M-pyrifera_M_contig102535.545.1|Name=mRNA_M-pyrifera_M_contig102535.545.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=240bp|location=Sequence derived from alignment at M-pyrifera_M_contig102535:3..242+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102535:3..242+ >mRNA_M-pyrifera_M_contig102535.545.1 ID=mRNA_M-pyrifera_M_contig102535.545.1|Name=mRNA_M-pyrifera_M_contig102535.545.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig102535:3..242+ (Macrocystis pyrifera P11B4 male)back to top |