mRNA_M-pyrifera_M_contig10195.423.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10195.423.1
Unique NamemRNA_M-pyrifera_M_contig10195.423.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig10195.423.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE)

HSP 1 Score: 422 bits (1084), Expect = 2.020e-146
Identity = 198/251 (78.88%), Postives = 221/251 (88.05%), Query Frame = 3 
Query:  123 MARTAFVALAVGMISAANALQVVTPSEGLTVIADRTYTVEWEGTSENNRFEIDLYYCGSYCMEDECGEWVTALCPYGEDGCPDNEGDFDIVMPEPMSGTSGSGYKVRVMDVDDEEDADCSDEFYLLASEDAPEVGDVDGPSLEVTSPAEGDMAEACHEYTIEFDYDNGVGSSVDRFAIDLFKAEGSGECGTWVASLCDKESIGCKDSMGDYDVEIPCDTGSGEYKVRVARFEDPSLFGCSGAFEIVGNESS 875
            M RT FVALA GM+ AANAL+V TPS+GLTVIADRTYTVEW GTS +NRFEIDLYYCGS CMED+CG+WVTALCPYGEDGCPDNEGD+DIVMPEPM GTSGSGYKVRV D+ DEEDADCSDEFYLLAS +AP VGD DGP+LEVTSPA GD+A  C EYT+EFDYDNGVGSSVDRFAIDL++A+G G+CGT+V S+CDK +IGCKDSMGDYDVEIPCDT +GEYK+RVARFED SL+ CSG F I   + S
Sbjct:    1 MTRTGFVALACGMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTIEEGDDS 251
[Close]
BLAST of mRNA_M-pyrifera_M_contig10195.423.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI)

HSP 1 Score: 382 bits (982), Expect = 4.470e-131
Identity = 182/249 (73.09%), Postives = 208/249 (83.53%), Query Frame = 3 
Query:  123 MARTAFVALAVGMISAANALQVVTPSEGLTVIADRTYTVEWEGTSENNRFEIDLYYCGSYCMEDECGEWVTALCPYGEDGCPDNEGDFDIVMPEPMSGTSGSGYKVRVMDVDDEEDADCSDEFYLLASEDAPEVGDVDGPSLEVTSPAEGDMAEACHEYTIEFDYDNGVGSSVDRFAIDLFKAEGSGECGTWVASLCDKESIGCKDSMGDYDVEIPCDTGSGEYKVRVARFEDPSLFGCSGAFEIVGNE 869
            MART FVALA  M+ AANAL+VVTPS  L V+ADRTYTVEW G +++ RFEIDLY+CGS CMED CG+WVTALCPYGE+GCPDNEGD+DIVMPEPMSG S SGYKVRVMDV DE+  DCSD FYL+ASEDAP+ G   G  L VTSPAEGD AEA  EYT+EFDYDNGVGS VDRF+IDL+ A+G G+CGT+V S+CDK SIGCKDSMGDYDVEIP DT +G+YK+RV RFED  L+GCSG F I+G +
Sbjct:    1 MARTGFVALACAMLGAANALEVVTPSADLIVVADRTYTVEWTG-ADSGRFEIDLYHCGSMCMEDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIMGGD 248
[Close]
BLAST of mRNA_M-pyrifera_M_contig10195.423.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE)

HSP 1 Score: 373 bits (957), Expect = 3.030e-127
Identity = 177/251 (70.52%), Postives = 203/251 (80.88%), Query Frame = 3 
Query:  123 MARTAFVALAVGMISAANALQVVTPSEGLTVIADRTYTVEWEGTSENNRFEIDLYYCGSYCMEDECGEWVTALCPYGEDGCPDNEGDFDIVMPEPMSGTSGSGYKVRVMDVDDEEDADCSDEFYLLASEDAPEVGDVDGPSLEVTSPAEGDMAEACHEYTIEFDYDNGVGSSVDRFAIDLFKAEGSGECGTWVASLCDKESIGCKDSMGDYDVEIPCDTGSGEYKVRVARFEDPSLFGCSGAFEIVGNESS 875
            M RT FVALA GM+  A+AL+VVTP+ G  V++ R YTVEW GT  N RFEIDLYYC S CMEDECGEWVTALCPYGEDGCPDNEGD+DIVMPEPMSGTSGSGYKVRV DVDDE+ +DCSDEFYL+A  DAP   D  GP + VTSP+ GD AEA  EYT+EFDYDNG+GSSV RFAIDL+ A GSG+CGT++ +LCDK +IGCKDSMGDYDVEIP D  +G Y +RV  FED S++GCS  FEI+G + S
Sbjct:    2 MVRTGFVALACGMLGVASALEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNSMCMEDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEILGADDS 252
[Close]
BLAST of mRNA_M-pyrifera_M_contig10195.423.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI)

HSP 1 Score: 366 bits (940), Expect = 2.110e-124
Identity = 171/241 (70.95%), Postives = 199/241 (82.57%), Query Frame = 3 
Query:  159 MISAANALQVVTPSEGLTVIADRTYTVEWEGTSENNRFEIDLYYCGSYCMEDECGEWVTALCPYGEDGCPDNEGDFDIVMPEPMSGTSGSGYKVRVMDVDDEEDADCSDEFYLLASEDAPEVGDVDGPSLEVTSPAEGDMAEACHEYTIEFDYDNGVGSSVDRFAIDLFKAEGSGECGTWVASLCDKESIGCKDSMGDYDVEIPCDTGSGEYKVRVARFEDPSLFGCSGAFEIVGNESSGD 881
            M+ AA+AL+VVTP+EG  V+A R YTVEW GT  NNR+EIDLYYCGS CMEDECG+WVTALCPYGEDGCPDNEGD+DIVMPEPMSGTSGSGYKVRV DVDD++  DCSDEFYL+A  +AP  GD  GP + VTSP+ GD AEA  EYT+EFDYDNG+GSSV RFAIDL+ A GSG+CGT++ +LCDK +IGCKDSMGDYDVEIP D  +G Y +RV  FED S++GCS  FEI+G + S D
Sbjct:    1 MLGAASALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGSMCMEDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEILGADDSPD 241
[Close]
BLAST of mRNA_M-pyrifera_M_contig10195.423.1 vs. uniprot
Match: D7FH21_ECTSI (Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH21_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 2.150e-121
Identity = 167/207 (80.68%), Postives = 187/207 (90.34%), Query Frame = 3 
Query:  123 MARTAFVALAVGMISAANALQVVTPSEGLTVIADRTYTVEWEGTSENNRFEIDLYYCGSYCMEDECGEWVTALCPYGEDGCPDNEGDFDIVMPEPMSGTSGSGYKVRVMDVDDEEDADCSDEFYLLASEDAPEVGDVDGPSLEVTSPAEGDMAEACHEYTIEFDYDNGVGSSVDRFAIDLFKAEGSGECGTWVASLCDKESIGCKDS 743
            MART FVALA GM+ AANAL+V TPS+GLTVIADRTYTVEW GTS +NRFEIDLYYCGS CMED+CG+WVTALCPYGEDGCPDNEGD+DIVMPEPMSGTSGSGYKVRV D+ DEEDADCSDEFYL+AS +AP VGD DGP+LEVTSPA GD+A  C EYT+EFDYDNGVGS VDRFAIDL++A+G G+CGT+V S+CDK +IGCKDS
Sbjct:    2 MARTGFVALACGMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVWDIHDEEDADCSDEFYLIASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSRVDRFAIDLYRADGDGDCGTYVQSICDKPTIGCKDS 208
[Close]
BLAST of mRNA_M-pyrifera_M_contig10195.423.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 1.660e-111
Identity = 168/251 (66.93%), Postives = 200/251 (79.68%), Query Frame = 3 
Query:  123 MARTAFVALAVGMISAANALQVVTPSEGLTVIADRTYTVEWEGTSENNRFEIDLYYCGSYCMEDECGEWVTALCPYGEDGCPDNEGDFDIVMPEPMSGTSGSGYKVRVMDVDDEEDADCSDEFYLLASEDAPEVGDVDGPSLEVTSPAEGDMAEACHEYTIEFDYDNGVGSSVDRFAIDLFK-AEGSGECGTWVASLCDKESIGCKDSMGDYDVEIPCDTGSGEYKVRVARFEDPSLFGCSGAFEIVGNES 872
            MARTAF ALA GM+ AANAL+VV+P+ G++VIADRTYTVEW GTS++ RFEIDLYYCGS+CMEDECG+WVTALCPYG DGCPD +GD+DIVMPEPM+GTS SGYKV V D +DE    CS +F L+AS DAP  G+V G SL VTSP++GD A A   YT+E+DY+NG+GSS DRFAIDL+    G+G+CGT+VA+LCDK SIGC DS GDYDVEIP DT +G Y VRV  F D  +F CS  FEIV + +
Sbjct:    1 MARTAFAALAFGMLGAANALEVVSPAAGISVIADRTYTVEWTGTSDS-RFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTS-SGYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEV-GYSLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIVNDRT 248
[Close]
BLAST of mRNA_M-pyrifera_M_contig10195.423.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 6.280e-111
Identity = 162/250 (64.80%), Postives = 197/250 (78.80%), Query Frame = 3 
Query:  123 MARTAFVALAVGMISAANALQVVTPSEGLTVIADRTYTVEWEGTSENNRFEIDLYYCGSYCMEDECGEWVTALCPYGEDGCPDNEGDFDIVMPEPMSGTSGSGYKVRVMDVDDEEDADCSDEFYLLASEDAPEVGDVDGPSLEVTSPAEGDMAEACHEYTIEFDYDNGVGSSVDRFAIDLFKAEGSGECGTWVASLCDKESIGCKDSMGDYDVEIPCDTGSGEYKVRVARFEDPSLFGCSGAFEIVGNES 872
            MARTAF ALA GM+ AANAL+VV+P+ G  V+AD  YTVEW G + + R++IDLYYCGS CMEDECG+WVTALCPYG+DGCPD +GD+D+VMPEPM GTS SGYKV V D  DE D  CS +F L+AS +AP+  D+ G  + VTSP++GD A A  EYT+EFDYDNG+GSSV+RFAIDL+ + GSG+CGT+V ++CDK SIGCKDS GDYDV IP  T SG Y +RV  FED  ++GCS +FEIVG ES
Sbjct:    1 MARTAFAALAFGMLGAANALEVVSPAAGDMVVADSAYTVEWTGAT-SGRYDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTS-SGYKVMVTDSSDESDYGCSGDFTLIASTEAPDATDM-GAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIVGGES 247
[Close]
BLAST of mRNA_M-pyrifera_M_contig10195.423.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 3.140e-109
Identity = 157/245 (64.08%), Postives = 195/245 (79.59%), Query Frame = 3 
Query:  123 MARTAFVALAVGMISAANALQVVTPSEGLTVIADRTYTVEWEGTSENNRFEIDLYYCGSYCMEDECGEWVTALCPYGEDGCPDNEGDFDIVMPEPMSGTSGSGYKVRVMDVDDEEDADCSDEFYLLASEDAPEVGDVDGPSLEVTSPAEGDMAEACHEYTIEFDYDNGVGSSVDRFAIDLFKAEGSGECGTWVASLCDKESIGCKDSMGDYDVEIPCDTGSGEYKVRVARFEDPSLFGCSGAFEI 857
            MARTAF A+A GM+SAANAL+VV+P  G++V+ADR YTVEW GT+   RFEIDLYYC S+CM+D CG+WVTALCPYG DGCPD+ GD+DI+MPEPMSGTS SGYKV V + +DE D  CSD+F L+ASEDAPE G++ G SL VTSP++GD A A   YT+E+DY+NG GSS DRFA+DL+   G+G+CGT+V +LCD+ SIGC DS GDYDVEIP DT +G Y +RV  F+D  ++ CS  FE+
Sbjct:    1 MARTAFAAVAFGMLSAANALEVVSPDGGISVLADRAYTVEWTGTT-TGRFEIDLYYCNSFCMDDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTS-SGYKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEM-GYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEV 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig10195.423.1 vs. uniprot
Match: A0A6H5KP11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP11_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 6.310e-94
Identity = 147/251 (58.57%), Postives = 174/251 (69.32%), Query Frame = 3 
Query:  123 MARTAFVALAVGMISAANALQVVTPSEGLTVIADRTYTVEWEGTSENNRFEIDLYYCGSYCMEDECGEWVTALCPYGEDGCPDNEGDFDIVMPEPMSGTSGSGYKVRVMDVDDEEDADCSDEFYLLASEDAPEVGDVDGPSLEVTSPAEGDMAEACHEYTIEFDYDNGVGSSVDRFAIDLFKAEGSGECGTWVASLCDKESIGCKDSMGDYDVEIPCDTGSGEYKVRVARFEDPSLFGCSGAFEIVGNESS 875
            MARTAF ALA GM+ A NAL+V +P+ G  ++A  + TVEW GTS + RF+IDLYYCGS CMEDECG+WVTALCPYG+DGCPD +GD+D+VMPEPM GTS SGYKV V D  DE D  CS EF L+AS                                  FD+DNG GSSV+RF+IDL+ + GSG+CGT+V S+CDK SIGCKDS GDYDV IP DT SG Y +RV  FEDP +FGCS +FEI+G ESS
Sbjct:    1 MARTAFAALAFGMLGAVNALEVTSPAAGDMIVAASSTTVEWTGTS-SGRFDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTS-SGYKVMVTDSSDESDMGCSGEFTLVASA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDHDNGFGSSVNRFSIDLYMSGGSGDCGTYVTSICDKSSIGCKDSQGDYDVVIPSDTESGMYSIRVGVFEDPDVFGCSDSFEIIGGESS 248
[Close]
BLAST of mRNA_M-pyrifera_M_contig10195.423.1 vs. uniprot
Match: A0A6H5JEJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ8_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 1.600e-93
Identity = 139/189 (73.54%), Postives = 157/189 (83.07%), Query Frame = 3 
Query:  306 MEDECGEWVTALCPYGEDGCPDNEGDFDIVMPEPMSGTSGSGYKVRVMDVDDEEDADCSDEFYLLASEDAPEVGDVDGPSLEVTSPAEGDMAEACHEYTIEFDYDNGVGSSVDRFAIDLFKAEGSGECGTWVASLCDKESIGCKDSMGDYDVEIPCDTGSGEYKVRVARFEDPSLFGCSGAFEIVGNES 872
            +EDECGEWVTALCPYG +GCPDNEGD+DIVMPEPMSGTSGSGYKVRV DVD  +DADCSDEFYL+AS +AP VG  D P L VTSP+ GD A+A  EYT+EFDYDNGVGS VDRF IDL+   G+G+CGTWV +LCDKE+IGCKDSMGDYDVEIP     G Y +RV RFED +L+GCSG FEIVG+ S
Sbjct:   12 VEDECGEWVTALCPYGSEGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDGPQDADCSDEFYLMASAEAPVVGGPDAPYLMVTSPSAGDKAQAGGEYTVEFDYDNGVGSRVDRFKIDLYSIGGTGDCGTWVMNLCDKEAIGCKDSMGDYDVEIPETVVDGMYSIRVGRFEDDALYGCSGEFEIVGSSS 200
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10195.423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JRG9_9PHAE2.020e-14678.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYL2_ECTSI4.470e-13173.09EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
A0A6H5JFT9_9PHAE3.030e-12770.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI46_ECTSI2.110e-12470.95EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FH21_ECTSI2.150e-12180.68Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus... [more]
D7G3F0_ECTSI1.660e-11166.93EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G3E8_ECTSI6.280e-11164.80Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JY62_9PHAE3.140e-10964.08GPI-anchored domain-containing protein n=2 Tax=Ect... [more]
A0A6H5KP11_9PHAE6.310e-9458.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEJ8_9PHAE1.600e-9373.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10195contigM-pyrifera_M_contig10195:4027..9125 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons5
Model size980
Cds size858
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10195.423.1prot_M-pyrifera_M_contig10195.423.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10195 4027..9003 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815520.1377842-CDS-M-pyrifera_M_contig10195:4026..42621622815520.1377842-CDS-M-pyrifera_M_contig10195:4026..4262Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10195 4027..4262 -
1692277447.454517-CDS-M-pyrifera_M_contig10195:4026..42621692277447.454517-CDS-M-pyrifera_M_contig10195:4026..4262Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10195 4027..4262 -
1622815520.1522262-CDS-M-pyrifera_M_contig10195:5836..59721622815520.1522262-CDS-M-pyrifera_M_contig10195:5836..5972Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10195 5837..5972 -
1692277447.4652936-CDS-M-pyrifera_M_contig10195:5836..59721692277447.4652936-CDS-M-pyrifera_M_contig10195:5836..5972Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10195 5837..5972 -
1622815520.1629732-CDS-M-pyrifera_M_contig10195:7282..75791622815520.1629732-CDS-M-pyrifera_M_contig10195:7282..7579Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10195 7283..7579 -
1692277447.4728682-CDS-M-pyrifera_M_contig10195:7282..75791692277447.4728682-CDS-M-pyrifera_M_contig10195:7282..7579Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10195 7283..7579 -
1622815520.17803-CDS-M-pyrifera_M_contig10195:8189..82741622815520.17803-CDS-M-pyrifera_M_contig10195:8189..8274Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10195 8190..8274 -
1692277447.480426-CDS-M-pyrifera_M_contig10195:8189..82741692277447.480426-CDS-M-pyrifera_M_contig10195:8189..8274Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10195 8190..8274 -
1622815520.1901858-CDS-M-pyrifera_M_contig10195:8899..90031622815520.1901858-CDS-M-pyrifera_M_contig10195:8899..9003Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10195 8900..9003 -
1692277447.4883428-CDS-M-pyrifera_M_contig10195:8899..90031692277447.4883428-CDS-M-pyrifera_M_contig10195:8899..9003Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10195 8900..9003 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815520.2003706-UTR-M-pyrifera_M_contig10195:9003..91251622815520.2003706-UTR-M-pyrifera_M_contig10195:9003..9125Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10195 9004..9125 -
1692277447.4981623-UTR-M-pyrifera_M_contig10195:9003..91251692277447.4981623-UTR-M-pyrifera_M_contig10195:9003..9125Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10195 9004..9125 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10195.423.1

>prot_M-pyrifera_M_contig10195.423.1 ID=prot_M-pyrifera_M_contig10195.423.1|Name=mRNA_M-pyrifera_M_contig10195.423.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=286bp
MARTAFVALAVGMISAANALQVVTPSEGLTVIADRTYTVEWEGTSENNRF
EIDLYYCGSYCMEDECGEWVTALCPYGEDGCPDNEGDFDIVMPEPMSGTS
GSGYKVRVMDVDDEEDADCSDEFYLLASEDAPEVGDVDGPSLEVTSPAEG
DMAEACHEYTIEFDYDNGVGSSVDRFAIDLFKAEGSGECGTWVASLCDKE
SIGCKDSMGDYDVEIPCDTGSGEYKVRVARFEDPSLFGCSGAFEIVGNES
SGDSGSSDSSDSSSNDGNGGSSDSSSDDMSMSYSF*
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mRNA from alignment at M-pyrifera_M_contig10195:4027..9125-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10195.423.1 ID=mRNA_M-pyrifera_M_contig10195.423.1|Name=mRNA_M-pyrifera_M_contig10195.423.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5099bp|location=Sequence derived from alignment at M-pyrifera_M_contig10195:4027..9125- (Macrocystis pyrifera P11B4 male)
CCACTCTCTTGCGACTTACGACTTTTGCGCCCGCCACGCAAAACTTCGAT
ATCGTCACTACTCCACCTCACCTTCGGCTCAGTCAGAAAGCTCCCTTCTT
CGTATCCTCTTCTCCCTGAAAGATGGCTCGCACTGCTTTCGTTGCTTTGG
CTGTGGGGATGATCAGCGCGGCTAACGCGCTCCAGGTCGTAACCCCCTCC
GAGGGCCTTACCGTCATCGCCGACAGGTGAGAGCAGCGACTACGAACATG
GCGGGAGGCGCCACGGGCGGATGCCGGTTGGTGCCGCGGCCATGGATAAC
GTCGGCTGGTTGGATGCGTTGGAGAGCGAACCACCTAGCGCGCATCGGGA
GCGGGATGGGGGAGGTGGTGATAGCTTCTGTGTTTTCGTTTGGGTGGCGG
CTGGCTGGGTGGGACGTTAGCGGCGGATAGATGATGGGATGATCAGAACG
AGATCTCGTGGTTGCAAAAAATAAACGCACTTCTTCGGCTGATCTATCGG
CTTTATTATTTTGTCTGGCTTGGAGTATGGTTCGTACTGTAGCTTCATTG
TGCCTATTGCGTGGTGCGGACTGGTGCTGCTGCTGTGTGATGTTGCTGCT
GCTGGCTTTCTTTTCCGAATGATGGCTACACAATGCCTTGCCGAGAGAGA
GCGACAGAGAGTGAGACAGCTAGAAAAACGGGATTCACCCCTCGCTCGCT
CTCGCTCGCGCCCTCTCGTCATCACGTCGCTTGGCTATCTATTCACTCAC
TGGATCTCGCTTGTGCTCCCTTCTTTTTCGTTTTTGTGCGCGTGCGCTCG
CTCGTCTGCTCGTTCCATCGTATTTTTTCGATTGTAACGTAATGATTCAA
GGACGTACACCGTGGAGTGGGAAGGCACCAGCGAAAACAACCGGTTCGAG
ATCGACCTGTACTACTGCGGCTCCTACTGCATGGAGGTGAGGTTGCACCT
CGTGCGCGCGACTGAGTACACCCGCAGCGTTTCTCTGTGTGGATCCTTGA
GTATGTATCATCTCACGATTCGGAACCCAGAATATAATCGTAGCACCTTG
CACGACGACTTTGATGTCGATACAAAAATACCGTAAAAATAAAAAAGAAC
TGGCTCTTGCCTCGAACATAACATTTCGGAAGTTAATTTTAGGATTTCGA
GAGAGACAAGCGAGCGAACGTCCCCACCACCCCTACCTACCTCATGCCGT
GGCCGTCGACTAGCAAAACACTGCGCCCCTCGCCCGCTCGCTTCTTGTTT
CGTTGTATCCCCTCTCGGCACCCCGAACGGTTCGTGGATAGATCACTTTG
TTGTCGATATTGCCGAGGTTCTACTGCTGTACAGTCTGTTTCTGCTGATG
TGCCGTTGGGAAACAAAAAATCAGAAATTAAAATATTTATATGGTACACA
GAGTACATGCTACAGCAGCGGTTGGTATCTGACCGATGTCTGAAAAACCG
AAAAAAATATACCGGTACCGGACAACTCTTCCATTCTGTACCAGTATATT
TTTTCTGACCGCCCTCCCTCTCTCCCTCCCTCCCCATCACGCACAGGACG
AGTGCGGCGAGTGGGTGACCGCCCTCTGCCCCTACGGTGAGGACGGCTGC
CCCGACAACGAGGGCGACTTCGACATCGTCATGCCCGAGCCCATGTCGGG
CACCTCCGGGTCCGGGTACAAGGTGCGTGTGATGGACGTGGACGACGAGG
AGGACGCGGACTGCTCCGACGAGTTCTACCTCCTCGCCAGCGAAGATGCG
CCCGAGGTGGGCGATGTGGACGGGCCTTCCCTCGAGGTCACGTCTCCCGC
GGAGGGCGACATGGCGGAAGCGTGCCACGAGTACACAATCGAGGTGAGAG
AACAGAACTCGCAAGCACTACGTACGAGAAGCGAGCCAGTGAGCGTTGTG
TGTCTTTGGTCTCTGTATGCATGGTGTGGTTCGGTGGGTTTTTTTGATAC
TCGAGTATGTATGTGATGTGCTGGATCTTTTATTTCGTGTTGATTTTTTT
TTTTTTTTTTTGCAGATGCGGCTTTTGTTGAACATGAAAAGGGCGAGTAT
TCTTTCGTTTGAAACGATCTTCAGAACAGCAGCCGTGCCGCATGTGTTGT
TTGTATGTATGCGTATCCTGCAGGCCTCGTCTACATTTCGTTTTCACCGA
ATTTTACAAGTATTAGGCCTCTTTGCAATGCTGTGTCTTGCTTCGTCAGC
AGCGCTTGGGGGGGTCTTGGCGGCTTGTCCGTGCGAAAAAACGAACGGCA
TACACCTGTTGTAGCTCCTTGTAGATTTCATGGGATTTTTTTCTTCTCGA
ATTGGATTCAGATTATTCGCAGGACTGCTGTCGACTGCTCTGCTGTTGCC
CTGTTTCCCGAGCTGGAAGAACATCGCAGCTATGATACATACCGTTACTG
CTTTATGGGCCTACGAGTAACAGGTACCGGTGCCACTACATGTGCGCGGT
GCGAAGTGCGATGGATCTCCACTATGAGAGAGTTCCAAATAATTCTCCGC
CATTGGCTTCGGCTGGTCTGGCTGGCTGTATGCTGACTTTCATCGAGTCT
ACTGCTGTACTGCTGTATGCACGATGTATATAACTCTACTCGTGGCGCGA
TCTCGATCTTGAGAGCGTACGCGATAATTATTATGCGTGCACGATCATAC
TGGTACTACTGCTGTTGTTACAGCAGTAACCACTACAGTACAATACCTTC
GCTTCAATTCGTACCTGGTACAGCGGTACTGCGATCTTCGTGTTTGCACG
ATATGATAGGCACCACACCACGCCTGCATGCGAAACGTACAAACCGAAAC
GTAGCGGTAGGAGTAACAATAACAAGAGGAGGAGGACTATTATAACCCGA
CCGAACAACCCCCAGTCTGTTGCCGGTCCCGTCCATGTAATACCTGGGAT
TATTTACCTCTGTTCCGCCACACCGGAATAATGGCGGCAACTTGCTGCCG
TGACTGCTGTATGAATCATTTCGCACGAGTTATTTCTACAACACAGCAGA
TTTATTTGACAACTGACTGCTTTTTTCTCTCTTCGCCCCCCCCTCGCCCC
CCCCCCCTCTCTCTCTCTCCCTGTGCTCTGTACGACCCGATCCATTTTCC
TCGCTCTTCCGTATTTATTTCTTCGTTGTAAAAACGTATTACATTATCTG
TAGTTCGACTACGACAACGGCGTGGGATCCAGCGTGGACCGGTTCGCGAT
CGACCTCTTCAAGGCCGAGGGCAGCGGTGAATGCGGAACATGGGTGGCCA
GCCTTTGCGACAAGGAGAGCATCGGCTGCAAGGACTCAAGTGAGTACTAC
GTCGTAGGTACACAGATTCCAGGCCACAGCAAATAAGAAACAGGCTAATA
AGAAAGCCGGGCCGAGATTTAGAGGGAATTAAGAAAGTCGTTAGGCCGCA
TCGTACGTACGGTACCTCTACTTTATTTTTCCTCGCGATTAATTACTGGC
CGGTGACTTGACTCCCCTGGAAGCTACCCGGGGGTCGACGAGACGATAAT
GCTTGTTTCTCAATCGATTTCTTGTTTCTTCCCGATTTCAAAAAGTAGAT
AACTTTTCCACGTGTATGTTTATGTGTTACGAAAAGATGACGACGGCAGA
CAGCCGTGAGATCGACTACCGGTAAATACTCGTATCATCGTGCGCCTACC
CTTATGTACGAGTACTGCTTGTACGGTGACAAACGAAGTAAAAACGATAC
GAGTATTTTATGATTTCACACGCACACCACTATATATACTAGTACAGCAT
GCTGCAGTATGTTCTCTAAAATATGTGTGTGTGTTCCTTCATTAATGATG
GGTGGATGCAGGTACAGCAGGCAGTAGTTGTTTCTTTGCTGTCAGTACTA
TTTCGTGCGCTTTGCCTGGTATTTTATTTATGGAGAACGACGGTGTGCGA
ACGTTGTAGTGACTTCTGTGATTGATATTATTACGTACTGGTAGAAAGAC
GGTGCAAGAGTTGCAGAAATGAGTCGAGCTAAAAAAAAATATGTGGAAAT
AAAGAGGATATCCGATCAACGCAACGAGAGCGCCATGAAAACTGCCATAT
ACATAAATACTCGCGTGGTTTGGAAGTTTTTTCACAACAGTGGCGTTCTA
CAGTACGGGCTTCCCTGAACGAGAACAAAACGTGGAAGTATGTATATATT
AATACTGGTATTGCGGAGGACCATAGTTAATAGGACCTACGGCACACACA
AACACGCATATGTTTCCATATTTTTACTAACAATATTTGGTCCTAATTAC
TATGGCCCCCCGTAATAACAGTTTTCAGGGAAGCCCGCCTTATTACTGTA
GAACGCCCCTGTTGAAAACTTCGAAACCACCTCAAGCAGAAGTAACCAGT
AAAATCAATACTGCTGTGTACCAGGAATCAATCACCCTATGCCCCCAATT
CCTACAAATAGGCGTGTTTCGTCCCCACTAGAGGGGGCTGAAGGGAATCT
GTTATTAATTATGTACTGAATACCGTCGTCTTGTACCAGGTACCATATAA
AAATACCATACTTGTGTAAATAGCGGAAAACGTGAGGGATGACTTGCCAT
AATTTCTTTGATTCGCCATTATTTAATTGTTCCGCTACTATCGCTCTCAA
ATGTCGTGTATCTATCTCACTGGTGTCGAAAGTACCGATGTGTTTGTTTG
CCGTTTTGATGAAAACAACCTGCCTACCTGGTGCGTAAGCACATACCTTC
AGTTAGGTTACGCCACGTCGGTGACTATTATTATTGTTGTTGCTTGCTTC
GAATCACGGCTAAAATATTTTTTTCCATGTCGCACACAATGTTGACGCAC
CCGCCACCCATCGTCCTTCCTTCCCTCTGCTGGCTATTTCTGTATTTCTT
ACAAACAACACAGTGGGCGACTACGACGTCGAGATCCCGTGCGACACCGG
GTCAGGCGAGTACAAGGTCCGAGTGGCACGCTTCGAAGACCCCTCGCTCT
TCGGCTGCTCCGGCGCCTTCGAGATTGTGGGCAACGAGTCGTCAGGCGAC
TCCGGCTCCAGCGACTCGTCCGACAGTTCCTCAAACGACGGCAACGGAGG
GTCGTCGGACTCTTCTTCGGACGACATGAGCATGTCTTACTCGTTCTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig10195:4027..9125-

>mRNA_M-pyrifera_M_contig10195.423.1 ID=mRNA_M-pyrifera_M_contig10195.423.1|Name=mRNA_M-pyrifera_M_contig10195.423.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1716bp|location=Sequence derived from alignment at M-pyrifera_M_contig10195:4027..9125- (Macrocystis pyrifera P11B4 male)
ATGGCTCGCACTGCTTTCGTTGCTTTGGCTGTGGGGATGATCAGCGCGGC
TAACGCGCTCCAGGTCGTAACCCCCTCCGAGGGCCTTACCGTCATCGCCG
ACAGATGGCTCGCACTGCTTTCGTTGCTTTGGCTGTGGGGATGATCAGCG
CGGCTAACGCGCTCCAGGTCGTAACCCCCTCCGAGGGCCTTACCGTCATC
GCCGACAGGACGTACACCGTGGAGTGGGAAGGCACCAGCGAAAACAACCG
GTTCGAGATCGACCTGTACTACTGCGGCTCCTACTGCATGGAGGACGTAC
ACCGTGGAGTGGGAAGGCACCAGCGAAAACAACCGGTTCGAGATCGACCT
GTACTACTGCGGCTCCTACTGCATGGAGGACGAGTGCGGCGAGTGGGTGA
CCGCCCTCTGCCCCTACGGTGAGGACGGCTGCCCCGACAACGAGGGCGAC
TTCGACATCGTCATGCCCGAGCCCATGTCGGGCACCTCCGGGTCCGGGTA
CAAGGTGCGTGTGATGGACGTGGACGACGAGGAGGACGCGGACTGCTCCG
ACGAGTTCTACCTCCTCGCCAGCGAAGATGCGCCCGAGGTGGGCGATGTG
GACGGGCCTTCCCTCGAGGTCACGTCTCCCGCGGAGGGCGACATGGCGGA
AGCGTGCCACGAGTACACAATCGAGGACGAGTGCGGCGAGTGGGTGACCG
CCCTCTGCCCCTACGGTGAGGACGGCTGCCCCGACAACGAGGGCGACTTC
GACATCGTCATGCCCGAGCCCATGTCGGGCACCTCCGGGTCCGGGTACAA
GGTGCGTGTGATGGACGTGGACGACGAGGAGGACGCGGACTGCTCCGACG
AGTTCTACCTCCTCGCCAGCGAAGATGCGCCCGAGGTGGGCGATGTGGAC
GGGCCTTCCCTCGAGGTCACGTCTCCCGCGGAGGGCGACATGGCGGAAGC
GTGCCACGAGTACACAATCGAGTTCGACTACGACAACGGCGTGGGATCCA
GCGTGGACCGGTTCGCGATCGACCTCTTCAAGGCCGAGGGCAGCGGTGAA
TGCGGAACATGGGTGGCCAGCCTTTGCGACAAGGAGAGCATCGGCTGCAA
GGACTCAATTCGACTACGACAACGGCGTGGGATCCAGCGTGGACCGGTTC
GCGATCGACCTCTTCAAGGCCGAGGGCAGCGGTGAATGCGGAACATGGGT
GGCCAGCCTTTGCGACAAGGAGAGCATCGGCTGCAAGGACTCAATGGGCG
ACTACGACGTCGAGATCCCGTGCGACACCGGGTCAGGCGAGTACAAGGTC
CGAGTGGCACGCTTCGAAGACCCCTCGCTCTTCGGCTGCTCCGGCGCCTT
CGAGATTGTGGGCAACGAGTCGTCAGGCGACTCCGGCTCCAGCGACTCGT
CCGACAGTTCCTCAAACGACGGCAACGGAGGGTCGTCGGACTCTTCTTCG
GACGACATGAGCATGTCTTACTCGTTCTAATGGGCGACTACGACGTCGAG
ATCCCGTGCGACACCGGGTCAGGCGAGTACAAGGTCCGAGTGGCACGCTT
CGAAGACCCCTCGCTCTTCGGCTGCTCCGGCGCCTTCGAGATTGTGGGCA
ACGAGTCGTCAGGCGACTCCGGCTCCAGCGACTCGTCCGACAGTTCCTCA
AACGACGGCAACGGAGGGTCGTCGGACTCTTCTTCGGACGACATGAGCAT
GTCTTACTCGTTCTAA
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