mRNA_M-pyrifera_M_contig101928.417.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101928.417.1 vs. uniprot
Match: A0A127MCD2_9SPHN (AP_endonuc_2 domain-containing protein n=1 Tax=Sphingorhabdus sp. M41 TaxID=1806885 RepID=A0A127MCD2_9SPHN) HSP 1 Score: 255 bits (651), Expect = 3.320e-83 Identity = 125/170 (73.53%), Postives = 140/170 (82.35%), Query Frame = 1 Query: 4 LRAKRIVTHIHETDSNRTADQLAKLCTMAHDHSLEVGLEFTGFAAGCNSLTRAVALHDRMNQSNLTIAIDALHLFRTGGTLDQLQAVAPDIIGYAQLGDGPDCRRSDDYLDEAMNRMIPGKGVFPLEKLLALLGPHVDIDIEVPHFAGSAGQDAKSWAHRAIAASRNLFD 513 L AKR+VTHIHE+ R DQL KLCT+A DH LEVGLEFTGFAAGCNSL A+ALHDR++Q NL IAIDALHLFRTGGTL+QLQA+ P IGYAQL DGPD R S +YLDEAMNRMIPG+GVFPL+K++ALLGPHVDIDIEVP+FA A AK WA RA+ SR LFD Sbjct: 96 LGAKRVVTHIHESAKPRAEDQLTKLCTIALDHELEVGLEFTGFAAGCNSLANAIALHDRVDQPNLKIAIDALHLFRTGGTLEQLQAIDPATIGYAQLCDGPDFRLSKNYLDEAMNRMIPGEGVFPLKKMVALLGPHVDIDIEVPNFANPARSSAKPWAQRAVTGSRYLFD 265
BLAST of mRNA_M-pyrifera_M_contig101928.417.1 vs. uniprot
Match: A0A2M7LBE3_9SPHN (AP_endonuc_2 domain-containing protein n=1 Tax=Sphingomonadales bacterium CG_4_10_14_3_um_filter_58_15 TaxID=1974093 RepID=A0A2M7LBE3_9SPHN) HSP 1 Score: 255 bits (651), Expect = 3.660e-83 Identity = 124/170 (72.94%), Postives = 142/170 (83.53%), Query Frame = 1 Query: 1 ELRAKRIVTHIHETDSNRTADQLAKLCTMAHDHSLEVGLEFTGFAAGCNSLTRAVALHDRMNQSNLTIAIDALHLFRTGGTLDQLQAVAPDIIGYAQLGDGPDCRRSDDYLDEAMNRMIPGKGVFPLEKLLALLGPHVDIDIEVPHFAGSAGQDAKSWAHRAIAASRNLF 510 EL AKRIVTHIHE +R DQL+ LC +A DH LEVGLEFTGFAAGCNSL A ALHDRMNQ NLTIAIDALHLFRTGGTL+Q+QA+ P IGYAQL DGPD RRS DY+ EAM+R+IPG+GVFPL +L+ALLGPHVDIDIEVP+ G +A++WAHRA+AASR+LF Sbjct: 95 ELGAKRIVTHIHEPSHHRAEDQLSSLCILARDHDLEVGLEFTGFAAGCNSLAAAAALHDRMNQPNLTIAIDALHLFRTGGTLEQVQALDPATIGYAQLCDGPDFRRSHDYIAEAMSRLIPGEGVFPLRELVALLGPHVDIDIEVPNSGPLPGSEARAWAHRAVAASRDLF 264
BLAST of mRNA_M-pyrifera_M_contig101928.417.1 vs. uniprot
Match: A0A220W7D6_9SPHN (Xylose isomerase-like TIM barrel n=1 Tax=Sphingorhabdus sp. SMR4y TaxID=2584094 RepID=A0A220W7D6_9SPHN) HSP 1 Score: 253 bits (647), Expect = 1.480e-82 Identity = 122/170 (71.76%), Postives = 142/170 (83.53%), Query Frame = 1 Query: 1 ELRAKRIVTHIHETDSNRTADQLAKLCTMAHDHSLEVGLEFTGFAAGCNSLTRAVALHDRMNQSNLTIAIDALHLFRTGGTLDQLQAVAPDIIGYAQLGDGPDCRRSDDYLDEAMNRMIPGKGVFPLEKLLALLGPHVDIDIEVPHFAGSAGQDAKSWAHRAIAASRNLF 510 EL AKR+V+H+HETD +R DQL+ LC++AH H L+VGLEFTGFAAGCNSL +AV LHDR+NQ NL IAIDALHLFRTGGT++QL+ V P IIGYAQL DGPD SDDYL+EAMNRM+PGKGVFPL +L++LLGPHVDIDIEVP F DA+SWA +AIAASR LF Sbjct: 95 ELGAKRLVSHVHETDPHRAEDQLSHLCSLAHAHDLDVGLEFTGFAAGCNSLQKAVDLHDRLNQPNLAIAIDALHLFRTGGTVEQLRTVDPAIIGYAQLCDGPDLHLSDDYLEEAMNRMVPGKGVFPLRQLVSLLGPHVDIDIEVPCFRARTPDDARSWARQAIAASRFLF 264
BLAST of mRNA_M-pyrifera_M_contig101928.417.1 vs. uniprot
Match: A0A2G2CTR5_9SPHN (AP_endonuc_2 domain-containing protein n=1 Tax=Sphingopyxis sp. TaxID=1908224 RepID=A0A2G2CTR5_9SPHN) HSP 1 Score: 248 bits (633), Expect = 2.320e-80 Identity = 122/170 (71.76%), Postives = 138/170 (81.18%), Query Frame = 1 Query: 1 ELRAKRIVTHIHETDSNRTADQLAKLCTMAHDHSLEVGLEFTGFAAGCNSLTRAVALHDRMNQSNLTIAIDALHLFRTGGTLDQLQAVAPDIIGYAQLGDGPDCRRSDDYLDEAMNRMIPGKGVFPLEKLLALLGPHVDIDIEVPHFAGSAGQDAKSWAHRAIAASRNLF 510 EL KRIVTHIHE+D +R DQL+ LC +A D+ LEVGLEFTGFAAGCNSLTRAV H + QSNLTIAIDALHLFRTGGTL+Q+QA+ P IIGYAQL DGPD RSDDY+ EAM+RMIPG+GVFPL +L+ALLGPHVDIDIEVPH A +A +WA RAI ASR L Sbjct: 95 ELGTKRIVTHIHESDRHRAEDQLSSLCLLARDNGLEVGLEFTGFAAGCNSLTRAVEWHGHVRQSNLTIAIDALHLFRTGGTLEQIQALDPAIIGYAQLCDGPDFHRSDDYIPEAMSRMIPGEGVFPLHELVALLGPHVDIDIEVPHSAPQTATEATNWAERAITASRKLL 264
BLAST of mRNA_M-pyrifera_M_contig101928.417.1 vs. uniprot
Match: A0A2D3RBT5_9SPHN (AP_endonuc_2 domain-containing protein n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A2D3RBT5_9SPHN) HSP 1 Score: 237 bits (605), Expect = 3.190e-76 Identity = 118/170 (69.41%), Postives = 138/170 (81.18%), Query Frame = 1 Query: 1 ELRAKRIVTHIHETDSNRTADQLAKLCTMAHDHSLEVGLEFTGFAAGCNSLTRAVALHDRMNQSNLTIAIDALHLFRTGGTLDQLQAVAPDIIGYAQLGDGPDCRRSDDYLDEAMNRMIPGKGVFPLEKLLALLGPHVDIDIEVPHFAGSAGQDAKSWAHRAIAASRNLF 510 EL A+R+V+HIHETD++R DQLAKLC +A DH +EVGLEFTGF+AGC+SL AVALH +++ NL IAIDALHLFRTGG L QLQAV P IIGYAQL DGPD R SD YLDEAMNRM+PG+G+FPL +L+ALLGP VDIDIEVP+FAG A DA+ WA RA+ R L Sbjct: 95 ELGARRLVSHIHETDAHRAEDQLAKLCLLALDHGMEVGLEFTGFSAGCHSLQDAVALHGCVDRPNLKIAIDALHLFRTGGDLAQLQAVDPAIIGYAQLCDGPDFRLSDAYLDEAMNRMVPGEGIFPLAELVALLGPQVDIDIEVPNFAGPADCDAEVWAQRAVYGCRKLL 264
BLAST of mRNA_M-pyrifera_M_contig101928.417.1 vs. uniprot
Match: UPI001E4AF9F0 (TIM barrel protein n=1 Tax=Parasphingorhabdus litoris TaxID=394733 RepID=UPI001E4AF9F0) HSP 1 Score: 229 bits (585), Expect = 3.460e-73 Identity = 112/171 (65.50%), Postives = 134/171 (78.36%), Query Frame = 1 Query: 1 ELRAKRIVTHIHETDSNRTADQLAKLCTMAHDHSLEVGLEFTGFAAGCNSLTRAVALHDRMNQSNLTIAIDALHLFRTGGTLDQLQAVAPDIIGYAQLGDGPDCRRSDDYLDEAMNRMIPGKGVFPLEKLLALLGPHVDIDIEVPHFAGSAGQDAKSWAHRAIAASRNLFD 513 EL AKR VTHIHE D R ADQL+ LC MA D +EVGLEFTGFA GC+SL +AV LH +NQ NL IAIDALHLFRTGGTL+QL+ V P IGYAQ+ DGP R+SDDY++EAMNRMIPG+G+FPL ++ LLG HVD+DIEVPH+A + DA++WA AIAAS+ L + Sbjct: 95 ELGAKRAVTHIHEVDPTRIADQLSALCKMARDLGMEVGLEFTGFAKGCDSLEKAVNLHRTINQPNLKIAIDALHLFRTGGTLEQLKTVDPQSIGYAQICDGPHFRKSDDYIEEAMNRMIPGEGMFPLRAMIDLLGEHVDLDIEVPHYASGSFFDAENWALEAIAASKELLE 265
BLAST of mRNA_M-pyrifera_M_contig101928.417.1 vs. uniprot
Match: A0A653JS18_9SPHN (Xylose isomerase-like TIM barrel n=1 Tax=Sphingorhabdus sp. 109 TaxID=2653173 RepID=A0A653JS18_9SPHN) HSP 1 Score: 229 bits (583), Expect = 6.950e-73 Identity = 111/170 (65.29%), Postives = 134/170 (78.82%), Query Frame = 1 Query: 1 ELRAKRIVTHIHETDSNRTADQLAKLCTMAHDHSLEVGLEFTGFAAGCNSLTRAVALHDRMNQSNLTIAIDALHLFRTGGTLDQLQAVAPDIIGYAQLGDGPDCRRSDDYLDEAMNRMIPGKGVFPLEKLLALLGPHVDIDIEVPHFAGSAGQDAKSWAHRAIAASRNLF 510 E+ A+R+V+H+H+TD +R DQL+ LCT+A H L+VGLEFTGFAAGCNSL +AVALH R+ Q NL IAIDALHLFRTGGT++QL++V P IIGYAQL DGP S DYLDEAMNRM+PG+GVFPL +L++LLG HVDIDIEVP F + A+ WA RAI SR L Sbjct: 95 EIGARRLVSHVHDTDPHRAEDQLSHLCTLARAHDLDVGLEFTGFAAGCNSLQKAVALHTRLAQPNLAIAIDALHLFRTGGTIEQLRSVDPAIIGYAQLCDGPALHLSADYLDEAMNRMVPGEGVFPLRELVSLLGSHVDIDIEVPAFMRPSKISARDWAQRAIRGSRRLL 264
BLAST of mRNA_M-pyrifera_M_contig101928.417.1 vs. uniprot
Match: UPI001C200182 (sugar phosphate isomerase/epimerase n=1 Tax=Sphingorhabdus sp. EL138 TaxID=2073156 RepID=UPI001C200182) HSP 1 Score: 228 bits (582), Expect = 7.180e-73 Identity = 112/170 (65.88%), Postives = 132/170 (77.65%), Query Frame = 1 Query: 1 ELRAKRIVTHIHETDSNRTADQLAKLCTMAHDHSLEVGLEFTGFAAGCNSLTRAVALHDRMNQSNLTIAIDALHLFRTGGTLDQLQAVAPDIIGYAQLGDGPDCRRSDDYLDEAMNRMIPGKGVFPLEKLLALLGPHVDIDIEVPHFAGSAGQDAKSWAHRAIAASRNLF 510 EL AKR VTHIHETD+ R ADQL LC LE+GLEFTGFA GC+SL +AV LH+ MNQ+NL IAIDALH+FRTGGTL+QL AV P IIGYAQ+ DGP R+SDDY++EAMNRMIPG+G+FPL L+ LLG HVD+DIEVPH+A DA+ WA AI+AS+ L Sbjct: 85 ELGAKRAVTHIHETDTTRIADQLGALCETVRGLGLEIGLEFTGFAKGCDSLEKAVKLHEAMNQANLRIAIDALHMFRTGGTLEQLNAVDPRIIGYAQICDGPHFRQSDDYVEEAMNRMIPGEGMFPLSALIDLLGDHVDLDIEVPHYAPGQHFDAEQWAFEAISASKALL 254
BLAST of mRNA_M-pyrifera_M_contig101928.417.1 vs. uniprot
Match: UPI001AA08F8D (sugar phosphate isomerase/epimerase n=1 Tax=Parasphingorhabdus sp. JHSY0214 TaxID=2806553 RepID=UPI001AA08F8D) HSP 1 Score: 226 bits (576), Expect = 8.010e-72 Identity = 113/171 (66.08%), Postives = 130/171 (76.02%), Query Frame = 1 Query: 1 ELRAKRIVTHIHETDSNRTADQLAKLCTMAHDHSLEVGLEFTGFAAGCNSLTRAVALHDRMNQSNLTIAIDALHLFRTGGTLDQLQAVAPDIIGYAQLGDGPDCRRSDDYLDEAMNRMIPGKGVFPLEKLLALLGPHVDIDIEVPHFAGSAGQDAKSWAHRAIAASRNLFD 513 EL AKR VTHI ETD R ADQL LC MA D +E+GLEFTGFA GC+SL +AV LH M QSNL IAIDALHLFRTGGTL+QL+A+ P IGYAQ+ DGP R+SDDY +EAMNRMIPG+G+FPL L+ LLG HVD DIEVPHFA DA+ WA +AIAA + L + Sbjct: 95 ELGAKRAVTHISETDPARIADQLGSLCEMASDLGMEIGLEFTGFAKGCDSLEKAVRLHQAMKQSNLKIAIDALHLFRTGGTLEQLKAIDPSSIGYAQICDGPHFRKSDDYFEEAMNRMIPGEGMFPLRALIDLLGAHVDWDIEVPHFASVPHFDAEDWALQAIAACKTLLE 265
BLAST of mRNA_M-pyrifera_M_contig101928.417.1 vs. uniprot
Match: A0A1B6ZEG5_9SPHN (AP_endonuc_2 domain-containing protein n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6ZEG5_9SPHN) HSP 1 Score: 221 bits (562), Expect = 7.770e-70 Identity = 108/171 (63.16%), Postives = 132/171 (77.19%), Query Frame = 1 Query: 1 ELRAKRIVTHIHETDSNRTADQLAKLCTMAHDHSLEVGLEFTGFAAGCNSLTRAVALHDRMNQSNLTIAIDALHLFRTGGTLDQLQAVAPDIIGYAQLGDGPDCRRSDDYLDEAMNRMIPGKGVFPLEKLLALLGPHVDIDIEVPHFAGSAGQDAKSWAHRAIAASRNLFD 513 EL AKRIVTH+ ++D R DQL LC +A DH L+VGLEFTGFA GCN++ +AV+L ++ Q NL IA+DALHLFRTGG+L +L AV P +IGYAQ+ DGPD R SDDY++EAMNRMIPG GVFPL + LALL VD+DIEVP F+G A D + WA AIAASR+LF+ Sbjct: 85 ELGAKRIVTHVQDSDPIRAEDQLDSLCRLAADHGLDVGLEFTGFAKGCNNIDKAVSLVGKLQQPNLNIAVDALHLFRTGGSLQKLAAVDPALIGYAQICDGPDFRISDDYVEEAMNRMIPGAGVFPLREFLALLSAEVDLDIEVPQFSGGAAFDPEQWALYAIAASRSLFE 255 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101928.417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101928.417.1 >prot_M-pyrifera_M_contig101928.417.1 ID=prot_M-pyrifera_M_contig101928.417.1|Name=mRNA_M-pyrifera_M_contig101928.417.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp ELRAKRIVTHIHETDSNRTADQLAKLCTMAHDHSLEVGLEFTGFAAGCNSback to top mRNA from alignment at M-pyrifera_M_contig101928:149..664- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101928.417.1 ID=mRNA_M-pyrifera_M_contig101928.417.1|Name=mRNA_M-pyrifera_M_contig101928.417.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig101928:149..664- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101928:149..664- >mRNA_M-pyrifera_M_contig101928.417.1 ID=mRNA_M-pyrifera_M_contig101928.417.1|Name=mRNA_M-pyrifera_M_contig101928.417.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig101928:149..664- (Macrocystis pyrifera P11B4 male)back to top |