mRNA_M-pyrifera_M_contig101865.394.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101865.394.1
Unique NamemRNA_M-pyrifera_M_contig101865.394.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig101865.394.1 vs. uniprot
Match: A0A7S1QT33_NEODS (Hypothetical protein n=2 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1QT33_NEODS)

HSP 1 Score: 154 bits (388), Expect = 2.110e-41
Identity = 81/144 (56.25%), Postives = 105/144 (72.92%), Query Frame = 1
Query:    1 MAGVTKSVNPATGEALREVANSDLSKFAEDVGRAREAQKEWRKRSFAERAREVAKVKAFLAEHAEECAEVVASCNGKTRMDALATEVLPCIMACDYYAANAGSVLAPHLCKGGSILFANKRTTVQYSPVGVVGIVSPWNYPFSV 432
            MAGVTK+ NPATGEAL  V N+  ++       AR+AQ  W + +F+ERA  V ++KAFLA +A+  AE+++  +GKTR DALATEVLPCIMACD+Y  N  SVL       G+ILFANK  T++Y+P+GVVGI+SPWNYPFS+
Sbjct:   17 MAGVTKTTNPATGEALPPVPNTSEAEARRVFDVARKAQFGWSRLTFSERAAFVKRIKAFLAANADRGAEIISKASGKTRQDALATEVLPCIMACDWYIKNTASVLKKQSLSCGNILFANKSNTLEYTPLGVVGIISPWNYPFSI 160          
BLAST of mRNA_M-pyrifera_M_contig101865.394.1 vs. uniprot
Match: UPI0004F436AA (putative aldehyde dehydrogenase n=1 Tax=Trypanosoma grayi TaxID=71804 RepID=UPI0004F436AA)

HSP 1 Score: 153 bits (386), Expect = 3.340e-41
Identity = 79/139 (56.83%), Postives = 100/139 (71.94%), Query Frame = 1
Query:   16 KSVNPATGEALREVANSDLSKFAEDVGRAREAQKEWRKRSFAERAREVAKVKAFLAEHAEECAEVVASCNGKTRMDALATEVLPCIMACDYYAANAGSVLAPHLCKGGSILFANKRTTVQYSPVGVVGIVSPWNYPFSV 432
            + +NPATG+AL  V  + L      V R R+AQK W   SF ERA+ V KVK FLA++AE  A +++ C+GKTR DALATE+LP +MACD+YA N  SVLAP     G+ILFANK  T+QY PVGVVGI+SPWN+PF++
Sbjct:    4 QQINPATGKALEPVEPNHLDDVVVAVRRVRDAQKAWASLSFKERAQHVEKVKRFLADNAERGASIISQCSGKTRHDALATEILPGVMACDWYAKNTASVLAPQKLSCGNILFANKSNTLQYIPVGVVGIISPWNFPFAI 142          
BLAST of mRNA_M-pyrifera_M_contig101865.394.1 vs. uniprot
Match: UPI000DB908BB (aldehyde dehydrogenase family protein n=1 Tax=Alcanivorax indicus TaxID=2202653 RepID=UPI000DB908BB)

HSP 1 Score: 149 bits (377), Expect = 5.820e-40
Identity = 75/139 (53.96%), Postives = 103/139 (74.10%), Query Frame = 1
Query:   16 KSVNPATGEALREVANSDLSKFAEDVGRAREAQKEWRKRSFAERAREVAKVKAFLAEHAEECAEVVASCNGKTRMDALATEVLPCIMACDYYAANAGSVLAPHLCKGGSILFANKRTTVQYSPVGVVGIVSPWNYPFSV 432
            + VNPATG+A  +++ +DLS   + + RAR+AQ +W  RSFAERAR +  ++ ++ ++AE  A VV+  NGKTR+DALATEVLPC +AC +YA NAG VL P     GSILF NKR+ +++ P+GVVGI+SPWNYP S+
Sbjct:   12 EDVNPATGDAFFQLSETDLSTLPDLMVRARQAQAQWAARSFAERARHITLMRRYIVDNAEHIAGVVSQSNGKTRVDALATEVLPCALACKWYAGNAGKVLKPRSRPSGSILFFNKRSRMEHVPLGVVGIISPWNYPLSI 150          
BLAST of mRNA_M-pyrifera_M_contig101865.394.1 vs. uniprot
Match: A0A1X0P348_9TRYP (Aldehyde dehydrogenase n=1 Tax=Trypanosoma theileri TaxID=67003 RepID=A0A1X0P348_9TRYP)

HSP 1 Score: 149 bits (375), Expect = 1.650e-39
Identity = 71/137 (51.82%), Postives = 99/137 (72.26%), Query Frame = 1
Query:   22 VNPATGEALREVANSDLSKFAEDVGRAREAQKEWRKRSFAERAREVAKVKAFLAEHAEECAEVVASCNGKTRMDALATEVLPCIMACDYYAANAGSVLAPHLCKGGSILFANKRTTVQYSPVGVVGIVSPWNYPFSV 432
            +NPATGE L  V  + + +  E V  AREAQ++W       RA+ + K+K FLA++AE  AE+++ CNGKTR DALATE+LPC+MAC++YA N   VL+P     G++LFANK  T++Y P+GVVG++SPWNYPF++
Sbjct:    6 INPATGEKLEPVTLNTVEEVMEAVKNAREAQQKWESVPIKVRAKHLQKMKRFLADNAERAAEIISECNGKTRQDALATEILPCVMACEWYAKNTEKVLSPQRLSCGNLLFANKSNTLEYIPLGVVGVISPWNYPFAI 142          
BLAST of mRNA_M-pyrifera_M_contig101865.394.1 vs. uniprot
Match: A0A2D5RD50_9GAMM (Succinate-semialdehyde dehydrogenase n=10 Tax=Alcanivorax TaxID=59753 RepID=A0A2D5RD50_9GAMM)

HSP 1 Score: 147 bits (372), Expect = 2.860e-39
Identity = 73/137 (53.28%), Postives = 99/137 (72.26%), Query Frame = 1
Query:   22 VNPATGEALREVANSDLSKFAEDVGRAREAQKEWRKRSFAERAREVAKVKAFLAEHAEECAEVVASCNGKTRMDALATEVLPCIMACDYYAANAGSVLAPHLCKGGSILFANKRTTVQYSPVGVVGIVSPWNYPFSV 432
            +NPATG A+ E+  +DL+   E + RAR AQ++W  +SF ERAR +  ++ ++ + AE+ A  V+  NGKTR+DALATEVLPC +AC++YA NAG VL P     G +LFANKRT V + P+GVVGI+SPWNYP S+
Sbjct:    6 INPATGAAVAELNETDLAGMPERMQRARAAQRQWAAKSFKERARHIELMRRYIVDRAEDLAATVSDSNGKTRIDALATEVLPCALACNWYAKNAGKVLGPQKRAAGHLLFANKRTEVSHLPLGVVGIISPWNYPLSI 142          
BLAST of mRNA_M-pyrifera_M_contig101865.394.1 vs. uniprot
Match: UPI00193164A1 (aldehyde dehydrogenase family protein n=1 Tax=Alcanivorax marinus TaxID=1177169 RepID=UPI00193164A1)

HSP 1 Score: 147 bits (372), Expect = 3.010e-39
Identity = 74/136 (54.41%), Postives = 100/136 (73.53%), Query Frame = 1
Query:   25 NPATGEALREVANSDLSKFAEDVGRAREAQKEWRKRSFAERAREVAKVKAFLAEHAEECAEVVASCNGKTRMDALATEVLPCIMACDYYAANAGSVLAPHLCKGGSILFANKRTTVQYSPVGVVGIVSPWNYPFSV 432
            NPATG A+ E+ ++DL+   E + +AR AQ  W  +SF ERAR +  ++ ++ E AE+ A +V+  NGKTR+DALATEVLPC +AC +Y  NAG VLAP   +GG +LFANK TTV++ P+GVVGI+SPWNYP S+
Sbjct:   12 NPATGAAVAELNHTDLATLPERIAKARAAQHRWAAKSFKERARHLRLMRDYIVERAEDLATIVSDSNGKTRVDALATEVLPCALACSWYGKNAGKVLAPQR-RGGHLLFANKSTTVEHLPLGVVGIISPWNYPLSI 146          
BLAST of mRNA_M-pyrifera_M_contig101865.394.1 vs. uniprot
Match: A0A220SLQ5_9GAMM (Succinate-semialdehyde dehydrogenase n=2 Tax=Alcanivorax TaxID=59753 RepID=A0A220SLQ5_9GAMM)

HSP 1 Score: 147 bits (371), Expect = 4.460e-39
Identity = 73/137 (53.28%), Postives = 99/137 (72.26%), Query Frame = 1
Query:   22 VNPATGEALREVANSDLSKFAEDVGRAREAQKEWRKRSFAERAREVAKVKAFLAEHAEECAEVVASCNGKTRMDALATEVLPCIMACDYYAANAGSVLAPHLCKGGSILFANKRTTVQYSPVGVVGIVSPWNYPFSV 432
            +NPATG A+ E+  +DL+   E + RAR+AQ+ W  +SF ERA  +  ++ +L + AE+ A  V+  NGKTR+DALATEVLPC +AC +YA NA  VL P + + GS+LFANKRT V + P+GVVGI+SPWNYP S+
Sbjct:   15 INPATGTAVAELNETDLASVPERLARARQAQRRWAAKSFKERASHIDLMRRYLVDRAEDLARTVSESNGKTRIDALATEVLPCALACQWYAGNAEKVLRPAMRRPGSLLFANKRTQVSHLPLGVVGIISPWNYPLSI 151          
BLAST of mRNA_M-pyrifera_M_contig101865.394.1 vs. uniprot
Match: UPI001CBD87BA (aldehyde dehydrogenase family protein n=1 Tax=Alcanivorax limicola TaxID=2874102 RepID=UPI001CBD87BA)

HSP 1 Score: 147 bits (370), Expect = 6.130e-39
Identity = 73/143 (51.05%), Postives = 102/143 (71.33%), Query Frame = 1
Query:    4 AGVTKSVNPATGEALREVANSDLSKFAEDVGRAREAQKEWRKRSFAERAREVAKVKAFLAEHAEECAEVVASCNGKTRMDALATEVLPCIMACDYYAANAGSVLAPHLCKGGSILFANKRTTVQYSPVGVVGIVSPWNYPFSV 432
            A + + VNPATG A   +A +DLS+    +  AR+AQ+ W  +SF ERA  + +++ ++ EHAE+ A  V+  NGKTR DALATEVLPC +AC++YA +A SVL P +   G++LF NKRT +Q+ P+GVVGI+SPWNYP S+
Sbjct:    8 ARMVEDVNPATGHAFFSIAETDLSRMPAMMADARQAQRLWAAKSFKERATHIQRMRRYIVEHAEQLALTVSQSNGKTRTDALATEVLPCALACNWYAKHAASVLKPRMRPAGTLLFINKRTQMQHVPLGVVGIISPWNYPLSI 150          
BLAST of mRNA_M-pyrifera_M_contig101865.394.1 vs. uniprot
Match: E1VL00_9GAMM (Aldehyde dehydrogenase n=1 Tax=gamma proteobacterium HdN1 TaxID=83406 RepID=E1VL00_9GAMM)

HSP 1 Score: 144 bits (364), Expect = 4.400e-38
Identity = 77/142 (54.23%), Postives = 97/142 (68.31%), Query Frame = 1
Query:    7 GVTKSVNPATGEALREVANSDLSKFAEDVGRAREAQKEWRKRSFAERAREVAKVKAFLAEHAEECAEVVASCNGKTRMDALATEVLPCIMACDYYAANAGSVLAPHLCKGGSILFANKRTTVQYSPVGVVGIVSPWNYPFSV 432
            G T   NPATGE L  VAN+DL    + + RAR AQ  W   SF +RA  + +++ +L  HAEE + +V+  NGKTR+DALATEVLPC +ACD+YA +A  VLA       S+LF NKRTT+Q  PVGVVGI+SPWNYP S+
Sbjct:   11 GQTLDHNPATGEELGSVANTDLRLVPDMIARARRAQAAWATTSFKQRAAAITQMRRYLVNHAEELSTLVSQSNGKTRIDALATEVLPCTLACDWYANHAEKVLADKKIPIESLLFFNKRTTIQRKPVGVVGIISPWNYPLSI 152          
BLAST of mRNA_M-pyrifera_M_contig101865.394.1 vs. uniprot
Match: A0A1W9LC54_9GAMM (Aldehyde dehydrogenase n=1 Tax=Beggiatoa sp. IS2 TaxID=1934247 RepID=A0A1W9LC54_9GAMM)

HSP 1 Score: 144 bits (363), Expect = 5.980e-38
Identity = 73/142 (51.41%), Postives = 100/142 (70.42%), Query Frame = 1
Query:    7 GVTKSVNPATGEALREVANSDLSKFAEDVGRAREAQKEWRKRSFAERAREVAKVKAFLAEHAEECAEVVASCNGKTRMDALATEVLPCIMACDYYAANAGSVLAPHLCKGGSILFANKRTTVQYSPVGVVGIVSPWNYPFSV 432
            GVT + +PAT E + E+ N+D+S+  E   +AR AQK+W   SF +R R + K++ ++ EHAE+ A+VV+  NGK+R+DALATEV+PC +AC +Y  NAG VL P      SILF NKR+ V   P+GVVGI+SPWNYP S+
Sbjct:    8 GVTVAYSPATLEKIGEINNTDMSRMPEFFAKARAAQKQWANLSFQQRNRHILKMRQYIVEHAEKIAKVVSDDNGKSRIDALATEVIPCALACQWYGKNAGKVLKPKNLWASSILFINKRSQVVRIPIGVVGIISPWNYPLSI 149          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101865.394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1QT33_NEODS2.110e-4156.25Hypothetical protein n=2 Tax=Neobodo designis TaxI... [more]
UPI0004F436AA3.340e-4156.83putative aldehyde dehydrogenase n=1 Tax=Trypanosom... [more]
UPI000DB908BB5.820e-4053.96aldehyde dehydrogenase family protein n=1 Tax=Alca... [more]
A0A1X0P348_9TRYP1.650e-3951.82Aldehyde dehydrogenase n=1 Tax=Trypanosoma theiler... [more]
A0A2D5RD50_9GAMM2.860e-3953.28Succinate-semialdehyde dehydrogenase n=10 Tax=Alca... [more]
UPI00193164A13.010e-3954.41aldehyde dehydrogenase family protein n=1 Tax=Alca... [more]
A0A220SLQ5_9GAMM4.460e-3953.28Succinate-semialdehyde dehydrogenase n=2 Tax=Alcan... [more]
UPI001CBD87BA6.130e-3951.05aldehyde dehydrogenase family protein n=1 Tax=Alca... [more]
E1VL00_9GAMM4.400e-3854.23Aldehyde dehydrogenase n=1 Tax=gamma proteobacteri... [more]
A0A1W9LC54_9GAMM5.980e-3851.41Aldehyde dehydrogenase n=1 Tax=Beggiatoa sp. IS2 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101865contigM-pyrifera_M_contig101865:65..496 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score150.6
Seed ortholog evalue5.6e-34
Seed eggNOG ortholog5693.XP_813115.1
KEGG koko:K10661
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004029,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0008150,GO:0008152,GO:0012505,GO:0016491,GO:0016620,GO:0016903,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0055114
EggNOG free text desc.Belongs to the aldehyde dehydrogenase family
EggNOG OGs3XTX0@5653,COG1012@1,KOG2454@2759
EC2.3.2.27
COG Functional cat.C
Best tax levelKinetoplastida
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Exons1
Model size432
Cds size432
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815518.6430821-CDS-M-pyrifera_M_contig101865:64..4961622815518.6430821-CDS-M-pyrifera_M_contig101865:64..496Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101865 65..496 -
1692277446.875803-CDS-M-pyrifera_M_contig101865:64..4961692277446.875803-CDS-M-pyrifera_M_contig101865:64..496Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101865 65..496 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101865.394.1prot_M-pyrifera_M_contig101865.394.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101865 65..496 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101865.394.1

>prot_M-pyrifera_M_contig101865.394.1 ID=prot_M-pyrifera_M_contig101865.394.1|Name=mRNA_M-pyrifera_M_contig101865.394.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp
MAGVTKSVNPATGEALREVANSDLSKFAEDVGRAREAQKEWRKRSFAERA
REVAKVKAFLAEHAEECAEVVASCNGKTRMDALATEVLPCIMACDYYAAN
AGSVLAPHLCKGGSILFANKRTTVQYSPVGVVGIVSPWNYPFSV
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mRNA from alignment at M-pyrifera_M_contig101865:65..496-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101865.394.1 ID=mRNA_M-pyrifera_M_contig101865.394.1|Name=mRNA_M-pyrifera_M_contig101865.394.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=432bp|location=Sequence derived from alignment at M-pyrifera_M_contig101865:65..496- (Macrocystis pyrifera P11B4 male)
ATGGCAGGAGTAACGAAGAGCGTGAACCCAGCGACAGGAGAGGCGCTGCG GGAGGTGGCAAACAGCGATCTCTCGAAGTTCGCAGAGGACGTGGGGAGGG CGCGAGAGGCGCAGAAGGAGTGGAGGAAGCGGAGCTTCGCAGAGCGGGCG AGAGAGGTGGCGAAGGTGAAGGCCTTCCTCGCGGAGCACGCGGAAGAGTG TGCCGAGGTGGTGGCCTCTTGCAACGGCAAAACCCGCATGGACGCGCTCG CCACCGAGGTGCTGCCTTGCATTATGGCCTGCGACTATTACGCGGCCAAC GCAGGGTCCGTCCTGGCGCCGCACCTGTGCAAGGGTGGCTCCATCCTCTT TGCCAACAAGCGCACCACCGTCCAGTACTCGCCAGTTGGCGTCGTCGGCA TCGTTTCCCCCTGGAACTACCCCTTCTCCGTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101865:65..496-

>mRNA_M-pyrifera_M_contig101865.394.1 ID=mRNA_M-pyrifera_M_contig101865.394.1|Name=mRNA_M-pyrifera_M_contig101865.394.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig101865:65..496- (Macrocystis pyrifera P11B4 male)
ATGGCAGGAGTAACGAAGAGCGTGAACCCAGCGACAGGAGAGGCGCTGCG
GGAGGTGGCAAACAGCGATCTCTCGAAGTTCGCAGAGGACGTGGGGAGGG
CGCGAGAGGCGCAGAAGGAGTGGAGGAAGCGGAGCTTCGCAGAGCGGGCG
AGAGAGGTGGCGAAGGTGAAGGCCTTCCTCGCGGAGCACGCGGAAGAGTG
TGCCGAGGTGGTGGCCTCTTGCAACGGCAAAACCCGCATGGACGCGCTCG
CCACCGAGGTGCTGCCTTGCATTATGGCCTGCGACTATTACGCGGCCAAC
GCAGGGTCCGTCCTGGCGCCGCACCTGTGCAAGGGTGGCTCCATCCTCTT
TGCCAACAAGCGCACCACCGTCCAGTACTCGCCAGTTGGCGTCGTCGGCA
TCGTTTCCCCCTGGAACTACCCCTTCTCCGTTATGGCAGGAGTAACGAAG
AGCGTGAACCCAGCGACAGGAGAGGCGCTGCGGGAGGTGGCAAACAGCGA
TCTCTCGAAGTTCGCAGAGGACGTGGGGAGGGCGCGAGAGGCGCAGAAGG
AGTGGAGGAAGCGGAGCTTCGCAGAGCGGGCGAGAGAGGTGGCGAAGGTG
AAGGCCTTCCTCGCGGAGCACGCGGAAGAGTGTGCCGAGGTGGTGGCCTC
TTGCAACGGCAAAACCCGCATGGACGCGCTCGCCACCGAGGTGCTGCCTT
GCATTATGGCCTGCGACTATTACGCGGCCAACGCAGGGTCCGTCCTGGCG
CCGCACCTGTGCAAGGGTGGCTCCATCCTCTTTGCCAACAAGCGCACCAC
CGTCCAGTACTCGCCAGTTGGCGTCGTCGGCATCGTTTCCCCCTGGAACT
ACCCCTTCTCCGTT
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