mRNA_M-pyrifera_M_contig101810.385.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101810.385.1
Unique NamemRNA_M-pyrifera_M_contig101810.385.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig101810.385.1 vs. uniprot
Match: UPI001038C819 (diacylglycerol kinase epsilon isoform X1 n=2 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI001038C819)

HSP 1 Score: 63.2 bits (152), Expect = 8.020e-9
Identity = 31/83 (37.35%), Postives = 44/83 (53.01%), Query Frame = 1
Query:  187 RLVVVVLGGDGTSAWVLRSMVAAGLRHIPVSLLPCGPGNDLSNSLGWGRVLSAHWFTKEGMMDFLATLEQGERIRLDVWEAVV 435
            R  ++  GGDGT AW+L S++AAG     V +LP G GNDLS  LGWG    +H          + +++Q     LD W+  +
Sbjct:  244 RCRILAAGGDGTVAWILNSLLAAGHMGAAVGILPMGTGNDLSRVLGWGPGCGSHLDAHS----IITSIKQANEQVLDRWKVTI 322          
BLAST of mRNA_M-pyrifera_M_contig101810.385.1 vs. uniprot
Match: A0A3S2LUW9_CHISP (Diacylglycerol kinase n=1 Tax=Chilo suppressalis TaxID=168631 RepID=A0A3S2LUW9_CHISP)

HSP 1 Score: 61.2 bits (147), Expect = 3.770e-8
Identity = 30/83 (36.14%), Postives = 45/83 (54.22%), Query Frame = 1
Query:  187 RLVVVVLGGDGTSAWVLRSMVAAGLRHIPVSLLPCGPGNDLSNSLGWGRVLSAHWFTKEGMMDFLATLEQGERIRLDVWEAVV 435
            R  V+ +GGDGT AW+L S+++A      V+++P G GNDLS  LGWG     H          + T++Q +   LD W+  +
Sbjct:  257 RCRVLAVGGDGTVAWILNSLLSATHVRASVAIMPMGTGNDLSRVLGWGSGSDTHLDAHS----IINTIKQADEQLLDRWKVTI 335          
BLAST of mRNA_M-pyrifera_M_contig101810.385.1 vs. uniprot
Match: A0A2P6VJQ7_9CHLO (Diacylglycerol kinase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VJQ7_9CHLO)

HSP 1 Score: 61.2 bits (147), Expect = 4.230e-8
Identity = 48/151 (31.79%), Postives = 72/151 (47.68%), Query Frame = 1
Query:    1 LVLFANEGSGDRLAGRLKQHMVSVLSGIPGLKLRAFSMTTEGVAAGIRACSAVAQPASSEDGRLVVVVLGGDGTSAWVLRSM-------VAAGLRHI---PVSLLPCGPGNDLSNSLGWGRVLSAHWFTKEGMMDFLATLEQGERIRLDVW 423
            L++F N  SG ++   L+   +  L  +  ++L              +   A  Q  +S    L V+V+GGDG+ AWVL S+        AAG  H    PV++LP G GNDL+  LGWG    A  + +EG+   LA ++    I +D W
Sbjct: 1099 LLVFINTKSGPQVGAMLRHRFLRALHPLQVVELPR------------QTPDAALQLFASAVPHLRVLVVGGDGSVAWVLSSLEALKEAQAAAGNPHWRPPPVAVLPLGTGNDLARCLGWGGGHGA--WQQEGVGTMLAEVQHAAPIHIDRW 1235          
BLAST of mRNA_M-pyrifera_M_contig101810.385.1 vs. uniprot
Match: A0A7S0LBY5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LBY5_9EUKA)

HSP 1 Score: 60.5 bits (145), Expect = 5.900e-8
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 1
Query:  196 VVVLGGDGTSAWVLRSMVAAGLRHIP-VSLLPCGPGNDLSNSLGWGR 333
            V+V GGDG++AWVLRS+  A L + P V LLP G GNDL+  LGWG+
Sbjct:  287 VLVCGGDGSAAWVLRSVEEADLEYTPAVGLLPLGTGNDLARILGWGK 333          
BLAST of mRNA_M-pyrifera_M_contig101810.385.1 vs. uniprot
Match: I0YQY8_COCSC (Diacylglycerol kinase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YQY8_COCSC)

HSP 1 Score: 58.5 bits (140), Expect = 3.160e-7
Identity = 29/81 (35.80%), Postives = 44/81 (54.32%), Query Frame = 1
Query:  187 RLVVVVLGGDGTSAWVLRSMVAAGLRHIP-VSLLPCGPGNDLSNSLGWGRVLSAHWFTKE-GMMDFLATLEQGERIRLDVW 423
            ++ ++  GGDGT AW+L+++    L   P V+++P G GNDLS S GWG      W  K   + + L  +   E+  LD W
Sbjct:   89 KMRILAAGGDGTVAWILKTIRDLELDPAPYVAVMPLGTGNDLSLSFGWGNTFLQSWIDKHITIYETLKRIGDAEQRNLDTW 169          
BLAST of mRNA_M-pyrifera_M_contig101810.385.1 vs. uniprot
Match: A0A8J9WKF7_9CHLO (Diacylglycerol kinase 6 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WKF7_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 6.230e-7
Identity = 29/81 (35.80%), Postives = 44/81 (54.32%), Query Frame = 1
Query:  187 RLVVVVLGGDGTSAWVLRSMVAAGLRHIP-VSLLPCGPGNDLSNSLGWGRVLSAHWFTKE-GMMDFLATLEQGERIRLDVW 423
            ++ ++  GGDGT AW+L+++    L   P V+++P G GNDLS S GWG      W  K   + + L  +   E+  LD W
Sbjct:  158 KMRILAAGGDGTVAWILKTIRDLELDPPPYVAVMPLGTGNDLSLSFGWGNTFLQSWIDKHITIYETLKRIGDAEQRNLDTW 238          
BLAST of mRNA_M-pyrifera_M_contig101810.385.1 vs. uniprot
Match: A0A5J4Y5N1_9CHLO (Diacylglycerol kinase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y5N1_9CHLO)

HSP 1 Score: 57.4 bits (137), Expect = 8.800e-7
Identity = 45/149 (30.20%), Postives = 64/149 (42.95%), Query Frame = 1
Query:    1 LVLFANEGSGDRLAGRLKQHMVSVLSGIPGLKLRAF------SMTTEGVAAGIRACSAVAQPASSEDGRLVVVVLGGDGTSAWVLRSMVAAGLRHIP-VSLLPCGPGNDLSNSLGWGRVLSAHWFTK-EGMMDFLATLEQGERIRLDVW 423
            L++F N  SG R    L + +   L       LR F            +AA I     +A    S   RL ++  GGDGT AW+L+++    L   P V+++P G GNDLS S GWG      W    + +   +  +   E   LD W
Sbjct:   77 LIVFINSRSGGRAGPALTETLFHALGHSQVYDLREFRPGPVLQKIYANLAAAIENGDKMASVVRS---RLRILAAGGDGTVAWILKTVRELQLEPPPAVAVMPLGTGNDLSLSFGWGNTFLHKWIADYKTLYATMKRIADAEPRDLDTW 222          
BLAST of mRNA_M-pyrifera_M_contig101810.385.1 vs. uniprot
Match: A0A6P5F813_ANACO (Diacylglycerol kinase n=8 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5F813_ANACO)

HSP 1 Score: 57.0 bits (136), Expect = 1.100e-6
Identity = 29/91 (31.87%), Postives = 50/91 (54.95%), Query Frame = 1
Query:  169 ASSEDGRLVVVVLGGDGTSAWVLRSMVAAGLRHIP-VSLLPCGPGNDLSNSLGWGRVLSAHWFTKEGMMDFLATLEQGERIRLDVWEAVVR 438
            A+  +GRL ++V GGDGT +W+L  +    L   P V+ +P G GN++  S GWG+        +E +  FL  + +   +++D W  ++R
Sbjct:   96 AAEIEGRLRLIVAGGDGTISWLLGVISDLNLAQPPPVATMPLGTGNNIPYSFGWGKKNPG--IDRESVKSFLDRVMKAREMKVDSWHIIMR 184          
BLAST of mRNA_M-pyrifera_M_contig101810.385.1 vs. uniprot
Match: A0A5J4XVW1_9CHLO (Diacylglycerol kinase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XVW1_9CHLO)

HSP 1 Score: 57.0 bits (136), Expect = 1.170e-6
Identity = 47/155 (30.32%), Postives = 74/155 (47.74%), Query Frame = 1
Query:    1 LVLFANEGSGDRLAGRLKQHMVSVLSGIPGLKLRAFSMTTEGVAAGIRACSAVAQPASSEDG--RLVVVVLGGDGTSAWVLRSM--VAAGLRH---IP--VSLLPCGPGNDLSNSLGWGRVLSAHWFTKEGMMDFLATLEQGERIRLDVWEAVVR 438
            L++F N  SG  L   L++  + +L+ +        +    G A G     A+ Q      G   L ++V+GGDGT AW+L  +  + A + +   +P  ++LLP G GNDL+  L WG  L A  F   G+   L  +EQ     LD W+  ++
Sbjct:  302 LLVFVNTKSGPMLGHTLRRKFLRLLNPLQVRHSECHAAAGGGAAQG----RALEQALKLFGGLPNLRLLVIGGDGTVAWILSCIDSIQASIGNEDWVPPAIALLPLGTGNDLARCLNWGGGLGA--FHSRGLTAVLQDIEQSTVALLDRWDIKIQ 450          
BLAST of mRNA_M-pyrifera_M_contig101810.385.1 vs. uniprot
Match: A0A2P6U2U2_CHLSO (Diacylglycerol kinase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U2U2_CHLSO)

HSP 1 Score: 54.7 bits (130), Expect = 7.600e-6
Identity = 33/87 (37.93%), Postives = 49/87 (56.32%), Query Frame = 1
Query:  196 VVVLGGDGTSAWVLR-------SMVAAG---LRHIPVSLLPCGPGNDLSNSLGWGRVLSAHW-FTKEGMMDFLATLEQGERIRLDVW 423
            V+V+GGDG+ AWVL        S  AAG    +  PV++LP G GNDL+  LGWG   + H  + +EG+   L+ ++    + +D W
Sbjct:  466 VLVVGGDGSVAWVLSTLEDIRASQAAAGNPQWKPPPVAVLPLGTGNDLARCLGWG---AGHGLWRQEGVSAMLSEVQHAAPLHIDRW 549          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101810.385.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
UPI001038C8198.020e-937.35diacylglycerol kinase epsilon isoform X1 n=2 Tax=O... [more]
A0A3S2LUW9_CHISP3.770e-836.14Diacylglycerol kinase n=1 Tax=Chilo suppressalis T... [more]
A0A2P6VJQ7_9CHLO4.230e-831.79Diacylglycerol kinase n=1 Tax=Micractinium conduct... [more]
A0A7S0LBY5_9EUKA5.900e-859.57Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
I0YQY8_COCSC3.160e-735.80Diacylglycerol kinase (Fragment) n=1 Tax=Coccomyxa... [more]
A0A8J9WKF7_9CHLO6.230e-735.80Diacylglycerol kinase 6 n=1 Tax=Coccomyxa sp. Obi ... [more]
A0A5J4Y5N1_9CHLO8.800e-730.20Diacylglycerol kinase n=1 Tax=Trebouxia sp. A1-2 T... [more]
A0A6P5F813_ANACO1.100e-631.87Diacylglycerol kinase n=8 Tax=Ananas comosus TaxID... [more]
A0A5J4XVW1_9CHLO1.170e-630.32Diacylglycerol kinase n=1 Tax=Trebouxia sp. A1-2 T... [more]
A0A2P6U2U2_CHLSO7.600e-637.93Diacylglycerol kinase n=1 Tax=Chlorella sorokinian... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101810contigM-pyrifera_M_contig101810:140..577 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score67.4
Seed ortholog evalue6.3e-09
Seed eggNOG ortholog126957.SMAR013353-PA
KEGG rclassRC00002,RC00017
KEGG koko:K00901
KEGG ReactionR02240
KEGG Pathwayko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00561,map00564,map01100,map01110,map04070,map04072,map05231
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Kinase activity. It is involved in the biological process described with
EggNOG OGs38BQZ@33154,3BAZ2@33208,3CSMM@33213,41UV2@6656,KOG0782@1,KOG0782@2759
EC2.7.1.107
COG Functional cat.T
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size438
Cds size438
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815518.0168936-CDS-M-pyrifera_M_contig101810:139..5771622815518.0168936-CDS-M-pyrifera_M_contig101810:139..577Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101810 140..577 +
1692277446.542155-CDS-M-pyrifera_M_contig101810:139..5771692277446.542155-CDS-M-pyrifera_M_contig101810:139..577Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101810 140..577 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101810.385.1prot_M-pyrifera_M_contig101810.385.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101810 140..577 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101810.385.1

>prot_M-pyrifera_M_contig101810.385.1 ID=prot_M-pyrifera_M_contig101810.385.1|Name=mRNA_M-pyrifera_M_contig101810.385.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp
LVLFANEGSGDRLAGRLKQHMVSVLSGIPGLKLRAFSMTTEGVAAGIRAC
SAVAQPASSEDGRLVVVVLGGDGTSAWVLRSMVAAGLRHIPVSLLPCGPG
NDLSNSLGWGRVLSAHWFTKEGMMDFLATLEQGERIRLDVWEAVVR
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mRNA from alignment at M-pyrifera_M_contig101810:140..577+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101810.385.1 ID=mRNA_M-pyrifera_M_contig101810.385.1|Name=mRNA_M-pyrifera_M_contig101810.385.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig101810:140..577+ (Macrocystis pyrifera P11B4 male)
TTGGTATTATTTGCAAATGAAGGGAGTGGAGATCGTTTGGCAGGTCGGTT GAAGCAGCATATGGTCTCAGTTCTGTCTGGGATACCTGGTTTGAAGCTAC GCGCGTTTTCTATGACAACAGAAGGCGTTGCAGCTGGAATTCGTGCATGT AGTGCTGTAGCTCAACCTGCAAGTAGTGAAGATGGTCGGTTGGTGGTGGT TGTGCTTGGTGGAGATGGAACATCGGCGTGGGTACTACGGAGTATGGTTG CGGCTGGATTGCGTCATATTCCAGTGAGTTTGCTGCCTTGTGGGCCTGGA AATGATTTAAGCAATTCCCTGGGGTGGGGTAGGGTGTTGAGTGCACATTG GTTCACGAAAGAAGGGATGATGGACTTTTTAGCAACGTTGGAACAAGGCG AAAGAATTCGGCTTGACGTTTGGGAAGCTGTGGTACGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101810:140..577+

>mRNA_M-pyrifera_M_contig101810.385.1 ID=mRNA_M-pyrifera_M_contig101810.385.1|Name=mRNA_M-pyrifera_M_contig101810.385.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig101810:140..577+ (Macrocystis pyrifera P11B4 male)
TTGGTATTATTTGCAAATGAAGGGAGTGGAGATCGTTTGGCAGGTCGGTT
GAAGCAGCATATGGTCTCAGTTCTGTCTGGGATACCTGGTTTGAAGCTAC
GCGCGTTTTCTATGACAACAGAAGGCGTTGCAGCTGGAATTCGTGCATGT
AGTGCTGTAGCTCAACCTGCAAGTAGTGAAGATGGTCGGTTGGTGGTGGT
TGTGCTTGGTGGAGATGGAACATCGGCGTGGGTACTACGGAGTATGGTTG
CGGCTGGATTGCGTCATATTCCAGTGAGTTTGCTGCCTTGTGGGCCTGGA
AATGATTTAAGCAATTCCCTGGGGTGGGGTAGGGTGTTGAGTGCACATTG
GTTCACGAAAGAAGGGATGATGGACTTTTTAGCAACGTTGGAACAAGGCG
AAAGAATTCGGCTTGACGTTTGGGAAGCTGTGGTACGTTTGGTATTATTT
GCAAATGAAGGGAGTGGAGATCGTTTGGCAGGTCGGTTGAAGCAGCATAT
GGTCTCAGTTCTGTCTGGGATACCTGGTTTGAAGCTACGCGCGTTTTCTA
TGACAACAGAAGGCGTTGCAGCTGGAATTCGTGCATGTAGTGCTGTAGCT
CAACCTGCAAGTAGTGAAGATGGTCGGTTGGTGGTGGTTGTGCTTGGTGG
AGATGGAACATCGGCGTGGGTACTACGGAGTATGGTTGCGGCTGGATTGC
GTCATATTCCAGTGAGTTTGCTGCCTTGTGGGCCTGGAAATGATTTAAGC
AATTCCCTGGGGTGGGGTAGGGTGTTGAGTGCACATTGGTTCACGAAAGA
AGGGATGATGGACTTTTTAGCAACGTTGGAACAAGGCGAAAGAATTCGGC
TTGACGTTTGGGAAGCTGTGGTACGT
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