mRNA_M-pyrifera_M_contig10177.373.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10177.373.1
Unique NamemRNA_M-pyrifera_M_contig10177.373.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig10177.373.1 vs. uniprot
Match: D8LAX4_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAX4_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 5.200e-105
Identity = 292/490 (59.59%), Postives = 314/490 (64.08%), Query Frame = 1 
Query:    1 MAEGGDDV------VIISVKFTSSDKAAGQVSMTLASTIGSLKEAIRSIFKVEPKRLIFQGRILNKDSQTLEECKLKDGLTVAVQVAPAAXXXXXXXXXXXXXXPLASPARSASPAPPANASATXRXXXXXXXXXXXXXXSAMGAASPVALAVATVRAQPAGVARDCLMTLTKVIDNIVAHPNEDKYRKIKRANAGFLRKVGGVPGGEACMRGLGFVEADADQGSWLLAPSAAAWNILTSGRIQIQSALATLPSAAFGGGVETGPSPPAGFAVGLGEMPPPGAFPXXXXXXXXXXXXXXXXXXXXXMGGGVPDMATMARMVQXXXXXXXXXXXXXXXXXXXXXXQMAAAMQSAMANPERMSQAXXXXXXXXXXXXXXXXXXXXXXXLQRASQMDLGGALAAGINAGG-NPARGFPPPMAGVGGQGGFAMPXXXXXXXXXXXXXXXXXXXXXTDAQAAMLAAGGIAEAAQAEEEMTEDELVAEAIRRSMED 1449
            MAEG D V        I VKFTSSDKAAGQVS++L  T+G LK AIRS F VEPKR+IFQGRILNKD QTL++CKLKDGLTV VQV       XXXXXXXXXXX         SPA P  A+            XXX   S     SPV  AVATV  QPAGVAR+CL TLTKVIDNI AHP E+KYRKIKRANAGF RKVG VPGGEACMR LGFVE    Q SWLLAPS AAWN+LT+GR+ IQ ALATLP A    G  TG     GFA GLG +PPPGAFP                      GGG+PDMATMARM Q       XXXXXXXXXXXXXXX     MQS MA P  ++QA          XXXXXXXXXX   LQRA+QMD GGALAAGINA   N A+GF  P             XXXXXXXXXXXXXXXXXXXXX        A+ G  EA +  +EMTEDEL+AEAIRRSMED
Sbjct:    1 MAEGADAVSAASATATIGVKFTSSDKAAGQVSISLEGTVGELKGAIRSQFDVEPKRIIFQGRILNKDDQTLQDCKLKDGLTVVVQVLAPGASPXXXXXXXXXXXXXXXXXXXXSPATPNPAAGLAAATQSMSGLXXXAVSS-----SPVGQAVATVSRQPAGVARECLTTLTKVIDNIKAHPTEEKYRKIKRANAGFSRKVGAVPGGEACMRALGFVEHGDAQESWLLAPSEAAWNVLTAGRVDIQRALATLPGAPAAAGASTG-----GFAGGLGVLPPPGAFPQAGFGGGTG-------------GGGMPDMATMARMAQNPAVMQGXXXXXXXXXXXXXXXXXXXXMQSVMARPGGLAQAFEAIQNNPAMXXXXXXXXXXPTALQRAAQMDFGGALAAGINAAPPNAAQGFQAPXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEGGGEAGEEGKEMTEDELIAEAIRRSMED 459
[Close]
BLAST of mRNA_M-pyrifera_M_contig10177.373.1 vs. uniprot
Match: A0A7S2SMK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMK3_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.800e-22
Identity = 87/244 (35.66%), Postives = 129/244 (52.87%), Query Frame = 1 
Query:   25 VIISVKFTSSDKAAGQVSMTLAS--TIGSLKEAIRSIFKVEP--KRLIFQGRILNKDSQTLEECKLKDGLTVAVQVA--PAAXXXXXXXXXXXXXXPLASPARSASPAPPANASATXRXXXXXXXXXXXXXXSAMGAASP---VALAVATVRAQPAGVARDCLMTLTKVIDNIVAHPNEDKYRKIKRANAGFLRKVGGVPGGEACMRGLGFVEADADQGSWLLAPSAAAWNILTSGRIQIQSAL 729
            + + VK TS ++    V MT+A   ++ + KEAI++   V+P  +RLI +G+IL KD Q L+  K+  G TV +QV   PAA                 +P  +A+P PP  A+                     G  +P   +  A+  + + P    R  L TL KVIDNI+ +PNEDKYR+++ ANA F RKVG +PGG  C+R +GF + + ++G+ +LAPS  AW+ L S R  +Q  L
Sbjct:    6 ITVKVKRTSGEQ---MVEMTVAPDLSVQAFKEAIQAKLGVDPAAQRLIHKGKIL-KDDQGLDVYKVATGETVLLQVTQRPAAAGATPSGTQ--------APVAAAAPMPPTAAAMA-------------------GTTAPTTGIQAALEELSSNPPDALRLGLETLLKVIDNIIQNPNEDKYRRLRPANATFNRKVGSLPGGLRCVREMGFTDGE-EEGTLILAPSTEAWHHLNSCRRLVQEKL 217
[Close]
BLAST of mRNA_M-pyrifera_M_contig10177.373.1 vs. uniprot
Match: A0A7S2SNT8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNT8_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.780e-21
Identity = 87/244 (35.66%), Postives = 129/244 (52.87%), Query Frame = 1 
Query:   25 VIISVKFTSSDKAAGQVSMTLAS--TIGSLKEAIRSIFKVEP--KRLIFQGRILNKDSQTLEECKLKDGLTVAVQVA--PAAXXXXXXXXXXXXXXPLASPARSASPAPPANASATXRXXXXXXXXXXXXXXSAMGAASP---VALAVATVRAQPAGVARDCLMTLTKVIDNIVAHPNEDKYRKIKRANAGFLRKVGGVPGGEACMRGLGFVEADADQGSWLLAPSAAAWNILTSGRIQIQSAL 729
            + + VK TS ++    V MT+A   ++ + KEAI++   V+P  +RLI +G+IL KD Q L+  K+  G TV +QV   PAA                 +P  +A+P PP  A+                     G  +P   +  A+  + + P    R  L TL KVIDNI+ +PNEDKYR+++ ANA F RKVG +PGG  C+R +GF + + ++G+ +LAPS  AW+ L S R  +Q  L
Sbjct:    6 ITVKVKRTSGEQ---MVEMTVAPDLSVQAFKEAIQAKLGVDPAAQRLIHKGKIL-KDDQGLDVYKVATGETVLLQVTQRPAAAGATPSGTQ--------APVAAAAPMPPTAAAMA-------------------GTTAPTTGIQAALEELSSNPPDALRLGLETLLKVIDNIIQNPNEDKYRRLRPANATFNRKVGSLPGGLRCVREMGFTDGE-EEGTLILAPSTEAWHHLNSCRRLVQEKL 217
[Close]
BLAST of mRNA_M-pyrifera_M_contig10177.373.1 vs. uniprot
Match: A0A4D9DE04_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DE04_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.280e-15
Identity = 97/257 (37.74%), Postives = 139/257 (54.09%), Query Frame = 1 
Query:    4 AEGGDDVVIISVKFTSSDKAAGQVSMTLA----STIGSLKEAIR-SIFKV--EPKRLIFQGRILNKDSQTLEECKLKDGLTVAVQVAPAAXXXXXXXXXXXXXXPLASPARSASPAP---PANASATXRXXXXXXXXXXXXXXSAMGAASPVALAVATVRAQPAG-VARDCLMTLTKVIDNIVAHPNEDKYRKIKRANAGFLRKVGGVPGGEACMRGLGFVEADADQGSWLLAPSAAAWNILTSGRIQIQSALATLP 741
            A+G D  ++I VK     K  G+ S++L     +TIG LK  I  S  +V  E +RL+FQG +L  D +TL E KL +G  V + V   +                ASP+  A PAP   P+N    X XXXXXXXXXXXX  +A  A   +  A+A VR+  +  V    L TL+ ++ NI+A+P E+K+R+ K++N  FLR+VG   G  A +R  GF E+     +W L PS   W +L + + +I +A+A LP
Sbjct:    4 ADGDDGKIVIKVKTL---KGGGENSVSLKVVPNTTIGELKAQIAASALEVPCESQRLVFQGCMLKDDRKTLAEHKLTEGSCVLLSVLSPSVSNSGSS---------ASPS-IACPAPSSLPSNNPXXXXXXXXXXXXXXXXSSTASPAVVILRAAIAGVRSSNSTEVGTLALQTLSTMLGNIIANPMEEKFRQFKKSNPAFLRRVGSASGTGAILRAAGFQESAQ---AWHLQPSEQGWGVLCTAKGEIDAAIAALP 244
[Close]
BLAST of mRNA_M-pyrifera_M_contig10177.373.1 vs. uniprot
Match: A0A1V9Z472_9STRA (Ubiquitin family protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z472_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 4.300e-15
Identity = 77/243 (31.69%), Postives = 116/243 (47.74%), Query Frame = 1 
Query:   94 TIGSLKEAIRSIFKVEPK--RLIFQGRILNKDSQTLEECKLKDGLTVAVQVAPAAXXXXXXXXXXXXXXPLASPARSASPAPPANASATXRXXXXXXXXXXXXXXSAMGAASPVALAVATVRAQPAGVARDCLMTLTKVIDNIVAHPNEDKYRKIKRANAGFLRKVGGVPGGEACMRGLGFVEADADQGSWLLAPSAAAWNILTSGRIQIQSALATLPSAAFGGGVETGPSPPAGFAVGLGEM 816
            T+  LK  ++ +    P+  RLIFQGR+L++ + TL    L DGLTV + +                  P A PA + +PA  A +  T                      SP+   +  ++  PAG+A   L TL K+ +NIV HP+E+KYRKI+ AN    +KV  VP G AC+  +GF     ++G  +L P+AA W  L + +  +  A  + P++AF      G  P AG +  L +M
Sbjct:   23 TVLDLKIKVQELLHCPPEAQRLIFQGRVLDEKA-TLASYSLADGLTVHLAI-------------NTKLMPAAVPAPTTTPASVAASIPTPATPV-----------------SPLVTLLPLLKQTPAGIA--ALGTLRKMAENIVNHPSEEKYRKIRVANEALKKKVLDVPHGLACVHAMGFAPG-VEEGHLVLVPTAANWEQLVAAKRLLDQA--STPASAFTPAAAPGFQPTAGSSDPLSDM 229
[Close]
BLAST of mRNA_M-pyrifera_M_contig10177.373.1 vs. uniprot
Match: A0A7R9YC84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC84_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 5.120e-15
Identity = 90/248 (36.29%), Postives = 122/248 (49.19%), Query Frame = 1 
Query:   73 VSMTLASTIGSLKEAIRSIFKVEPK--RLIFQGRILNKDSQTLEECKLKDGLTVAVQVAPAAXXXXXXXXXXXXXXPLASPARSAS-PAPPANASATXRXXXXXXXXXXXXXXSAMGA--ASPVALAVATVRAQPAGVARDCLMTLTKVIDNIVAHPNEDKYRKIKRANAGFLRKVGGVPGGEACMRGLGFVEADADQG-SWLLAPSAAAWNILTSGRIQIQ------------SALATLPSAAFGGG 762
            VS+ L   +  LK A+ +   + P+  RLI+ G++L   +  L    +KDG T+                         +P RSAS P  PA     X XXXXXXXXX       + A   +P   AV T+ A  A    + L TL KV++NI  +P E KYR +K+ NA F R++GGV G  AC+R LGF     D+G +W L PSA+AW IL++ R  +Q            +A A  P AAFG G
Sbjct:   79 VSIDLDGKVSDLKVAVEAATGIPPENQRLIYTGKLLKNGADPLAPFGIKDGDTILYMRM--------------------NPPRSASAPRAPAXXXXXXXXXXXXXXXXQRTNRLTIPAHQRTPFTHAVETLAADDAAKRPEALRTLLKVMENIQNNPLEAKYRTLKKGNAVFNRRLGGVMGAAACLRELGFQ----DRGETWELTPSASAWEILSAARTHLQRVIEAESPSTQAAAAANAPGAAFGQG 302
[Close]
BLAST of mRNA_M-pyrifera_M_contig10177.373.1 vs. uniprot
Match: A0A448ZQX1_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQX1_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.510e-12
Identity = 56/147 (38.10%), Postives = 84/147 (57.14%), Query Frame = 1 
Query:  412 GAASPVALAVATVRA-QPAGVARDCLMTLTKVIDNIVAHPNEDKYRKIKRANAGFLRKVGGVPGGEACMRGLGF-VEADADQGS--WLLAPSAAAWNILTSGRIQIQSALATLPSAAFGGGVETGPSP-PAGFAVGLGEMPPPGAFP 837
            GA+ P+ LA+  +R+  P  V    + TL KV+ NIV+HP E+KYR++K+ N  F +++GG+ GG  CM   GF VE D  + +  + L  +A +WN L   + +++ A+A    AA G   +   +P PAG   G G  PPPG  P
Sbjct:  143 GASDPLGLALERLRSGNPPSVYATAVGTLGKVLGNIVSHPMEEKYRRVKKQNPAFRKRLGGLAGGHDCMLACGFRVEVDEGENAEVYKLHATADSWNALVEAKTRVEEAVA---KAAAGDRQQPVQAPGPAGLLPG-GGFPPPGGLP 285
[Close]
BLAST of mRNA_M-pyrifera_M_contig10177.373.1 vs. uniprot
Match: A0A6G0XIW2_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIW2_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.720e-12
Identity = 75/239 (31.38%), Postives = 106/239 (44.35%), Query Frame = 1 
Query:  106 LKEAIRSIFKVEPKRLIFQGRILNKDSQTLEECKLKDGLTVAVQVAPAAXXXXXXXXXXXXXXPLASPARSASPAPPANASATXRXXXXXXXXXXXXXXSAMGAASPVALAVATVRAQPAGVARDCLMTLTKVIDNIVAHPNEDKYRKIKRANAGFLRKVGGVPGGEACMRGLGFVEADADQGSWLLAPSAAAWNILTSGRIQIQSALATLPSAAFGGGVETGPSPPAGFAVGLGEMPP 822
            LK   +  +  E +RLIFQGR+L+ D  TL    L  GL V + V                   + +PA + S  PP   S                          +A  +  +RA P+G     + TLTK+ +NI+ +P E+KYRKI+ AN    RKV  VP G AC+R +GF     D G  +L P+A+ W  L + +  +    AT  + AF       P+P +GF  G G M P
Sbjct:   36 LKVQAKLNYPPEAQRLIFQGRVLD-DKNTLASYSLASGLAVHLAVNTKL---------------VPTPATATSTPPPVAPSGPT-----------------------LAQLLPLLRASPSG--PGAIATLTKMAENIINNPGEEKYRKIRLANEALKRKVLDVPHGMACVRAMGFAPGVED-GHLVLVPNASNWEHLLASKRTLDQFNATAAAPAFPF-PSAAPAPSSGFPTG-GRMSP 230
[Close]
BLAST of mRNA_M-pyrifera_M_contig10177.373.1 vs. uniprot
Match: A0A836CLK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK8_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.150e-12
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 1 
Query:  502 VIDNIVAHPNEDKYRKIKRANAGFLRKVGGVPGGEACMRGLGFVEADADQGSWLLAPSAAAWNILTSGRIQIQSALATLPSAA 750
            V DNI+ HP E+KYR IK++N  F  +VG VPGG A ++ LGF ++     +W+L PSA AW  L  GR  +QS L++L +AA
Sbjct:  201 VADNIINHPLEEKYRSIKKSNKSFAARVGNVPGGAAAIQALGFTDSPTVPDTWVLLPSADAWPTLRQGRDLLQSTLSSLGTAA 283
[Close]
BLAST of mRNA_M-pyrifera_M_contig10177.373.1 vs. uniprot
Match: A0A7S3KXS0_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KXS0_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 6.560e-12
Identity = 69/198 (34.85%), Postives = 110/198 (55.56%), Query Frame = 1 
Query:  148 RLIFQGRILNKDSQ-TLEECKLKDGLTVAVQVAPAAXXXXXXXXXXXXXXPLASPARSASPAPPANASATXRXXXXXXXXXXXXXXSAMGAASPVALAVATVRAQPAG-VARDCLMTLTKVIDNIVAHPNEDKYRKIKRANAGFLRKVGGVPGGEACMRGLGF-VEAD-ADQGSWLLAPSAAAWNILTSGRIQIQSAL 729
            +LIF+GR++  D +  + E KL+DG  +     P A                A+PA +A+P     AS          XXXXXXX +A+G   P+ +A+ T+RA  A  V +  + TL K++  I+++P E+KYR +K+ N  F R++GG+PGG+A M+ +GF VE D + Q  + +  SA AW  L + +  I++A+
Sbjct:   53 KLIFRGRMIADDGKKAVTEYKLEDGSVLHCMGKPQAEN--------------AAPAPAAAPXX-XXASLPSVNLIPPSXXXXXXXPAALGVGDPLTMALRTLRASNAPQVYKTAIETLEKLLSKIISNPLEEKYRSVKKDNPAFTRRLGGLPGGDASMKAVGFNVETDESGQAVYRMQASAEAWPKLLAAQTTIRNAV 235
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10177.373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAX4_ECTSI5.200e-10559.59Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
A0A7S2SMK3_9STRA1.800e-2235.66Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2SNT8_9STRA2.780e-2135.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9DE04_9STRA1.280e-1537.74Ubiquitin-like domain-containing protein n=1 Tax=N... [more]
A0A1V9Z472_9STRA4.300e-1531.69Ubiquitin family protein n=1 Tax=Achlya hypogyna T... [more]
A0A7R9YC84_9STRA5.120e-1536.29Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A448ZQX1_9STRA1.510e-1238.10Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A6G0XIW2_9STRA1.720e-1231.38Ubiquitin-like domain-containing protein n=1 Tax=A... [more]
A0A836CLK8_9STRA3.150e-1248.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3KXS0_9STRA6.560e-1234.85Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10177contigM-pyrifera_M_contig10177:2606..7132 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score338.2
Seed ortholog evalue6.4e-90
Seed eggNOG ortholog2880.D8LAX4
KEGG koko:K04523
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0016043,GO:0019538,GO:0019941,GO:0022402,GO:0022607,GO:0030163,GO:0030433,GO:0030474,GO:0030674,GO:0031023,GO:0032446,GO:0033554,GO:0034976,GO:0036211,GO:0036503,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0050896,GO:0051300,GO:0051603,GO:0051716,GO:0060090,GO:0070647,GO:0071704,GO:0071840,GO:1901564,GO:1901565,GO:1901575,GO:1901698
EggNOG free text desc.ubiquitin
EggNOG OGsCOG5272@1,KOG0010@2759
Ec32 ortholog descriptionPUG domain
Ec32 orthologEc-27_006090.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03051,ko04131
Exons4
Model size1455
Cds size1455
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10177.373.1prot_M-pyrifera_M_contig10177.373.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10177 2606..7132 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815517.412995-CDS-M-pyrifera_M_contig10177:2605..30251622815517.412995-CDS-M-pyrifera_M_contig10177:2605..3025Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10177 2606..3025 -
1692277446.3110328-CDS-M-pyrifera_M_contig10177:2605..30251692277446.3110328-CDS-M-pyrifera_M_contig10177:2605..3025Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10177 2606..3025 -
1622815517.4288304-CDS-M-pyrifera_M_contig10177:3302..37551622815517.4288304-CDS-M-pyrifera_M_contig10177:3302..3755Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10177 3303..3755 -
1692277446.3209925-CDS-M-pyrifera_M_contig10177:3302..37551692277446.3209925-CDS-M-pyrifera_M_contig10177:3302..3755Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10177 3303..3755 -
1622815517.4450724-CDS-M-pyrifera_M_contig10177:4163..46231622815517.4450724-CDS-M-pyrifera_M_contig10177:4163..4623Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10177 4164..4623 -
1692277446.328758-CDS-M-pyrifera_M_contig10177:4163..46231692277446.328758-CDS-M-pyrifera_M_contig10177:4163..4623Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10177 4164..4623 -
1622815517.4587426-CDS-M-pyrifera_M_contig10177:7010..71321622815517.4587426-CDS-M-pyrifera_M_contig10177:7010..7132Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10177 7011..7132 -
1692277446.3386376-CDS-M-pyrifera_M_contig10177:7010..71321692277446.3386376-CDS-M-pyrifera_M_contig10177:7010..7132Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10177 7011..7132 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10177.373.1

>prot_M-pyrifera_M_contig10177.373.1 ID=prot_M-pyrifera_M_contig10177.373.1|Name=mRNA_M-pyrifera_M_contig10177.373.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=485bp
MAEGGDDVVIISVKFTSSDKAAGQVSMTLASTIGSLKEAIRSIFKVEPKR
LIFQGRILNKDSQTLEECKLKDGLTVAVQVAPAAAPTPPPPPPSGGGPPL
ASPARSASPAPPANASATARQAAAQAFGRGPGGGSAMGAASPVALAVATV
RAQPAGVARDCLMTLTKVIDNIVAHPNEDKYRKIKRANAGFLRKVGGVPG
GEACMRGLGFVEADADQGSWLLAPSAAAWNILTSGRIQIQSALATLPSAA
FGGGVETGPSPPAGFAVGLGEMPPPGAFPGGFGGGFAGGYGGGFGGGGMG
MGGGVPDMATMARMVQDPAIMQGMMNDPSVQSMMRNNPQMAAAMQSAMAN
PERMSQAMNLMETNPAMAQMAQQMMQDPAALQRASQMDLGGALAAGINAG
GNPARGFPPPMAGVGGQGGFAMPPPPAPAPTTDAAAAPVPPPPATDAQAA
MLAAGGIAEAAQAEEEMTEDELVAEAIRRSMEDI*
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mRNA from alignment at M-pyrifera_M_contig10177:2606..7132-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10177.373.1 ID=mRNA_M-pyrifera_M_contig10177.373.1|Name=mRNA_M-pyrifera_M_contig10177.373.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4527bp|location=Sequence derived from alignment at M-pyrifera_M_contig10177:2606..7132- (Macrocystis pyrifera P11B4 male)
ATGGCGGAAGGTGGAGACGATGTCGTAATTATTTCCGTCAAGTTCACATC
GTCAGACAAGGCTGCGGGGCAAGTGTCGATGACCTTGGCAAGCACCATCG
GCTCTCTCAAGGAGGCCATCAGGTGCGACAGGCGACAGCCTACCCTCAGG
AACATTCGCGGTTGTTCTCTATCTTGGTTTCGGTGCTATCCACCGTTTTC
GCAGCGCGATTGAACACTTATTAGGCGACAGAGGTAACGAAAGCGACGAT
AGTACGTCGTACCGGGCATCAAATATCACACCAGCAGCGGCAACTCTGAG
TGAGGTTATACCAGCGGTCGTTCGACGGCAGCGAATTACTCTCCCGAAGA
GTATTGCATTGCTGCTGTAGGCAAGCGTCTCTCCGAGCGACACCTGCTTA
CCGGCCTCCCTCCTCCGGTGCGCGTGCTTTACACTCGTGACTCTCGCACT
AATGTTGTACTCGTCGGGCTATACGATAGAACGAGCAGCAGCACAATGAC
CCGCAGCTACGCCCTGAAAAAAGGCAGCAGTTTTGAGCTGTACTGCTGTA
CCAGGCACTCTCAAGCATGCGGGATTTGTGATTCGGTGACGTTTCAGCTT
TGTCACTTTGCCCCACGTGCACTTTGTCGTTCATGATGAGACACGATACG
AACCGATAACAGCGTACACGTTGATCTACTCGCGGCTGCCGGCCTCGCGT
GTACAGCTAGCTTCCACGACGTCAGGGTGCTATTATACTATCAGTACGTA
GTCAGTACAAGCTGATGATCGTAGACGTGGAGGCTACGACGTACCACAAC
TTAGGTAATGCTGTACTGGAGAACTGATGCAACTCTACTGTAATTCCAAG
TCTCAAAGTACACCAGGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTCCTTTTTTTTTTGGGTTTTTCTCTTTTTGTTTTT
TTGTACAAGTNNNNNNNNNNTTTTTAATCATCACTTTTACTTTCCAGCCC
ACTCGTAGGAGGTTTTACCCTCGACGATCTTCTGGACAAGGTATACATCA
GTATTAATAGTCTACACTACAACCAGAGTCTGTTCTCAGAAGGTGGAGCT
TTACAGCTCGCGGCAAAGCTGCAGCTATATACCCTGGTACATATTTAGCA
GCAGCAACAACACAAACCTCTAGAAGCTTCAGGCTTCAGACAGCAGGTCG
AGTGATCTATTGTTAATATTAATTATTAATAGTGTTCTGGCCAGGTTGAC
AAGAGAGCCGAAATGCGTGGATTCCCGATCTGCTGCAGCCCGTATGCTGA
TAAAGCTTAATATTTTATAAGTACAAATACTCGTACTAATGGCTCGGTTA
CAGCAGCAGTCGTCAGTGGGTTGCCAACAGCAGCAGCAGAAGTGAGCGAA
CATGAACACGTCGTGTCAGTTCGTGAACCGAGGTACTGCTGCTGCTGCTG
CCATCAAACCAAAATTTACTTGCTATTTTGTCTTGGGAATCGTACATGGC
GGGCACCATCTTGCCTTCGCCTATCGCGGGTGGGGCAGGCAGCCACAGCA
GCCCACGGCGCCACCTTGCAGTCGTGTCAAGTATTTACGTACTTCTTTCT
GTACATTACTGGTATTACAGCAGTGTTATTGATACCGGTAGTTATATTCG
TGGTTGGGATGAGTAATCTGGTAACAATGTCAAGTGTCAATGGTGTGGCA
TTATATATGAGTGCCTGTCAACTTGCAAACAATGCGAGTGCTCGTTGCGC
AATGAAACGCACGATAGAGCGCCCGTGATGCTGCAGGGAAAGACGATCTG
CTGTAGGGGAGTTTGCTGTCCCGCCCTCGGTGGGTGGGGCACACGGGCTG
GGCCGATGCGTCTGGGCTGGGCCAATGTGTATATATATCGTAGTGCCCAC
CTTTGAGGCTGCGTAAGTGTGGAGCATTTGAAAGTATGGAGCAAAATCGC
AACGCCGCGGTTGCTCTTCCATTCTTTGTTTTCGCCGTTCAATCTGGGCG
GTATCACACCCATTGCTTCACTACTTCCCCCGTGACATCTCTACACTTTG
CTCGGTGGTCGGTGGGTGTTCGGGCATGGCTAACAGCAGCCCCCGCGCAC
CCTCAAACCCGCGAAACAAGCCTTAACACCGCATGACCGTCGAATCGCTC
GTTCGTATCGTGCGCGGCTACGAACCACAAATGACACTTCAATCAGGTTG
CCAGCTGGCCTTGTAGCAGTTAGAGCTACAGTAACCCCAAGAAACCCTTC
ATCACCTCGAACAGATCATGATCTATCTTATCTGTCTACAGTAGATGATC
TAGTTCCTCACCTGCCGTTGTGAGAGGTTGTGCAAGATCTTACGTGGTAC
AGGTCCCATCAAGGCAAGATCGGGAATAGATCTGCCTTCAAAGGTGTAGA
TCATGAACTCTGGGAAACAAATTTATATGTCCGAAGTGTGAACCCTTCCG
CCCGCCCACCCACCCATCCATCCATCGCACCCATCCCATCCCACCCACTC
GTCGGCCAGGTCTATCTTCAAGGTGGAGCCGAAGCGTTTAATATTCCAGG
GCCGCATCCTGAACAAGGACAGCCAGACCCTGGAAGAGTGCAAACTCAAG
GACGGCCTGACTGTGGCCGTTCAAGTGGCACCCGCGGCTGCGCCTACCCC
CCCGCCGCCGCCGCCGTCGGGAGGAGGGCCCCCTCTCGCGTCGCCGGCTC
GTAGCGCATCGCCAGCCCCCCCCGCGAATGCCTCCGCGACCGCGAGGCAA
GCTGCCGCGCAAGCGTTTGGCAGGGGCCCTGGCGGGGGGTCCGCCATGGG
AGCGGCGAGCCCCGTCGCGCTGGCGGTGGCCACGGTGCGTGCGCAGCCCG
CAGGGGTGGCGCGGGATTGCCTGATGACGCTGACGAAAGTTATCGACAAT
ATCGTGGCGCACCCGAATGAAGACAAGTACAGGAAGATCAAGCGAGCGAA
CGCCGGGTTTCTGCGTAAGGTGGGATTTTTTCTGCCGGCGATTCTCGTGA
TTTAAAAAATTATCCTTGTGGTGTATCTCGTTCTTAATTGGGGTTGTGGG
GACACTTTCCGCTGTTGTGGTTTTGGTCAGCGCGAGAACGCGTATGTGAA
AATTAGGTGCTTGCCAACTGCAGTAAGTATATCAGGTACGGTGCGTAGGG
TCTCGGTAAGATCCTCTCTCCCTCCCTCCCTCTCCCCCCCCCTCCTCTGC
CTGGTCGGTGAAAACCCGACGTGCTCCGTCCCGGCATTTGTAGGGATGCG
AGGGTCTATGGTCGTATGACTACGGCGATGCACGATAATCAGTACACCCC
CTCCTCCTCCACCCTAACCTTATCCGCTACTGTGTTGCCGCACAATCTTA
CCGGGCTATCTAATATATGTATTTTAGGTCGGAGGAGTTCCAGGTGGAGA
GGCGTGCATGCGAGGCCTGGGCTTTGTGGAGGCCGACGCGGACCAAGGGA
GTTGGCTCTTGGCCCCCAGCGCGGCCGCCTGGAATATACTCACCTCTGGT
CGAATCCAAATTCAGAGCGCTCTGGCCACCCTGCCCTCTGCTGCTTTCGG
TGGCGGCGTGGAAACTGGCCCCTCCCCCCCTGCGGGATTCGCCGTGGGCC
TGGGAGAAATGCCCCCTCCCGGAGCTTTCCCTGGAGGGTTCGGCGGGGGC
TTCGCTGGAGGATATGGCGGAGGGTTTGGCGGAGGCGGAATGGGGATGGG
GGGGGGGGTGCCGGACATGGCGACGATGGCGCGAATGGTACAGGACCCTG
CGATTATGCAGGGGATGATGAACGACCCGTCAGTGCAGAGCATGATGAGG
AATAACCCGCAGATGGCAGCGGCTATGCAGGTGCTTTTTTTGCCTTTGGC
CTTTTTCATGGACACACTGGCGACATAATAGTTTATGCCACAACACCCTG
TTCATGTCGAGGTGTTGTCCATGTCCACACAGCCAACGGAAAGAACGATT
CCATCCATTCTACACCGCTGGGATATTTGTAAATTGGAGCGCCACCGCAC
GTCTAGTCTTACTGTTTTTCGTATTTGTCCGGGCATCGCTACTTCCCCTC
TCCACCGCAATGTCTGGTCCTCCTGTCCCCTCCCCCCCCCCCATGTGTGC
ACTCCAGTCGGCGATGGCCAATCCTGAACGAATGTCTCAGGCGATGAACC
TTATGGAGACCAACCCCGCTATGGCACAGATGGCGCAGCAGATGATGCAA
GACCCGGCTGCTCTCCAGCGAGCCTCCCAGATGGACCTCGGCGGGGCTCT
TGCAGCAGGCATCAACGCCGGTGGAAACCCCGCACGAGGTTTTCCACCAC
CCATGGCAGGCGTCGGCGGCCAAGGAGGGTTCGCAATGCCCCCGCCCCCT
GCTCCTGCTCCTACCACCGACGCTGCCGCTGCCCCGGTGCCACCACCGCC
CGCAACCGACGCTCAAGCTGCCATGCTGGCAGCAGGCGGTATAGCCGAAG
CTGCTCAAGCCGAGGAGGAGATGACCGAAGACGAGCTAGTGGCAGAAGCG
ATCCGACGGTCGATGGAGGATATCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig10177:2606..7132-

>mRNA_M-pyrifera_M_contig10177.373.1 ID=mRNA_M-pyrifera_M_contig10177.373.1|Name=mRNA_M-pyrifera_M_contig10177.373.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2910bp|location=Sequence derived from alignment at M-pyrifera_M_contig10177:2606..7132- (Macrocystis pyrifera P11B4 male)
ATGGCGGAAGGTGGAGACGATGTCGTAATTATTTCCGTCAAGTTCACATC
GTCAGACAAGGCTGCGGGGCAAGTGTCGATGACCTTGGCAAGCACCATCG
GCTCTCTCAAGGAGGCCATCAGATGGCGGAAGGTGGAGACGATGTCGTAA
TTATTTCCGTCAAGTTCACATCGTCAGACAAGGCTGCGGGGCAAGTGTCG
ATGACCTTGGCAAGCACCATCGGCTCTCTCAAGGAGGCCATCAGGTCTAT
CTTCAAGGTGGAGCCGAAGCGTTTAATATTCCAGGGCCGCATCCTGAACA
AGGACAGCCAGACCCTGGAAGAGTGCAAACTCAAGGACGGCCTGACTGTG
GCCGTTCAAGTGGCACCCGCGGCTGCGCCTACCCCCCCGCCGCCGCCGCC
GTCGGGAGGAGGGCCCCCTCTCGCGTCGCCGGCTCGTAGCGCATCGCCAG
CCCCCCCCGCGAATGCCTCCGCGACCGCGAGGCAAGCTGCCGCGCAAGCG
TTTGGCAGGGGCCCTGGCGGGGGGTCCGCCATGGGAGCGGCGAGCCCCGT
CGCGCTGGCGGTGGCCACGGTGCGTGCGCAGCCCGCAGGGGTGGCGCGGG
ATTGCCTGATGACGCTGACGAAAGTTATCGACAATATCGTGGCGCACCCG
AATGAAGACAAGTACAGGAAGATCAAGCGAGCGAACGCCGGGTTTCTGCG
TAAGGTCTATCTTCAAGGTGGAGCCGAAGCGTTTAATATTCCAGGGCCGC
ATCCTGAACAAGGACAGCCAGACCCTGGAAGAGTGCAAACTCAAGGACGG
CCTGACTGTGGCCGTTCAAGTGGCACCCGCGGCTGCGCCTACCCCCCCGC
CGCCGCCGCCGTCGGGAGGAGGGCCCCCTCTCGCGTCGCCGGCTCGTAGC
GCATCGCCAGCCCCCCCCGCGAATGCCTCCGCGACCGCGAGGCAAGCTGC
CGCGCAAGCGTTTGGCAGGGGCCCTGGCGGGGGGTCCGCCATGGGAGCGG
CGAGCCCCGTCGCGCTGGCGGTGGCCACGGTGCGTGCGCAGCCCGCAGGG
GTGGCGCGGGATTGCCTGATGACGCTGACGAAAGTTATCGACAATATCGT
GGCGCACCCGAATGAAGACAAGTACAGGAAGATCAAGCGAGCGAACGCCG
GGTTTCTGCGTAAGGTCGGAGGAGTTCCAGGTGGAGAGGCGTGCATGCGA
GGCCTGGGCTTTGTGGAGGCCGACGCGGACCAAGGGAGTTGGCTCTTGGC
CCCCAGCGCGGCCGCCTGGAATATACTCACCTCTGGTCGAATCCAAATTC
AGAGCGCTCTGGCCACCCTGCCCTCTGCTGCTTTCGGTGGCGGCGTGGAA
ACTGGCCCCTCCCCCCCTGCGGGATTCGCCGTGGGCCTGGGAGAAATGCC
CCCTCCCGGAGCTTTCCCTGGAGGGTTCGGCGGGGGCTTCGCTGGAGGAT
ATGGCGGAGGGTTTGGCGGAGGCGGAATGGGGATGGGGGGGGGGGTGCCG
GACATGGCGACGATGGCGCGAATGGTACAGGACCCTGCGATTATGCAGGG
GATGATGAACGACCCGTCAGTGCAGAGCATGATGAGGAATAACCCGCAGA
TGGCAGCGGCTATGCAGGTCGGAGGAGTTCCAGGTGGAGAGGCGTGCATG
CGAGGCCTGGGCTTTGTGGAGGCCGACGCGGACCAAGGGAGTTGGCTCTT
GGCCCCCAGCGCGGCCGCCTGGAATATACTCACCTCTGGTCGAATCCAAA
TTCAGAGCGCTCTGGCCACCCTGCCCTCTGCTGCTTTCGGTGGCGGCGTG
GAAACTGGCCCCTCCCCCCCTGCGGGATTCGCCGTGGGCCTGGGAGAAAT
GCCCCCTCCCGGAGCTTTCCCTGGAGGGTTCGGCGGGGGCTTCGCTGGAG
GATATGGCGGAGGGTTTGGCGGAGGCGGAATGGGGATGGGGGGGGGGGTG
CCGGACATGGCGACGATGGCGCGAATGGTACAGGACCCTGCGATTATGCA
GGGGATGATGAACGACCCGTCAGTGCAGAGCATGATGAGGAATAACCCGC
AGATGGCAGCGGCTATGCAGTCGGCGATGGCCAATCCTGAACGAATGTCT
CAGGCGATGAACCTTATGGAGACCAACCCCGCTATGGCACAGATGGCGCA
GCAGATGATGCAAGACCCGGCTGCTCTCCAGCGAGCCTCCCAGATGGACC
TCGGCGGGGCTCTTGCAGCAGGCATCAACGCCGGTGGAAACCCCGCACGA
GGTTTTCCACCACCCATGGCAGGCGTCGGCGGCCAAGGAGGGTTCGCAAT
GCCCCCGCCCCCTGCTCCTGCTCCTACCACCGACGCTGCCGCTGCCCCGG
TGCCACCACCGCCCGCAACCGACGCTCAAGCTGCCATGCTGGCAGCAGGC
GGTATAGCCGAAGCTGCTCAAGCCGAGGAGGAGATGACCGAAGACGAGCT
AGTGGCAGAAGCGATCCGACGGTCGATGGAGGATATCTGATCGGCGATGG
CCAATCCTGAACGAATGTCTCAGGCGATGAACCTTATGGAGACCAACCCC
GCTATGGCACAGATGGCGCAGCAGATGATGCAAGACCCGGCTGCTCTCCA
GCGAGCCTCCCAGATGGACCTCGGCGGGGCTCTTGCAGCAGGCATCAACG
CCGGTGGAAACCCCGCACGAGGTTTTCCACCACCCATGGCAGGCGTCGGC
GGCCAAGGAGGGTTCGCAATGCCCCCGCCCCCTGCTCCTGCTCCTACCAC
CGACGCTGCCGCTGCCCCGGTGCCACCACCGCCCGCAACCGACGCTCAAG
CTGCCATGCTGGCAGCAGGCGGTATAGCCGAAGCTGCTCAAGCCGAGGAG
GAGATGACCGAAGACGAGCTAGTGGCAGAAGCGATCCGACGGTCGATGGA
GGATATCTGA
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