mRNA_M-pyrifera_M_contig101705.358.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101705.358.1
Unique NamemRNA_M-pyrifera_M_contig101705.358.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig101705.358.1 vs. uniprot
Match: A0A7C6DLQ7_9BACT (Glycosyltransferase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7C6DLQ7_9BACT)

HSP 1 Score: 121 bits (304), Expect = 3.250e-32
Identity = 65/105 (61.90%), Postives = 78/105 (74.29%), Query Frame = 1
Query:    1 YRAATALWFSSTHRSEAFGLVQVEAMANGCPVINTDIPGSGVPEVSVDQESGLTVPNENPRALADAASALLNDNGLRADLSGRARERAIREYDRSTMINRLCSIY 315
            Y AATALWF S  RSEAFGLVQ+EAMA+GCPVINT IPGSGV  VS+  +SGLT+P E+P ALA+AA  LL++ GLR  LS  AR RA+ E+D+  M  R   +Y
Sbjct:   61 YLAATALWFPSNARSEAFGLVQIEAMASGCPVINTRIPGSGVDWVSLHGQSGLTIPVEDPVALAEAARRLLDEPGLRQRLSRDARRRAMAEFDQHRMARRTLDVY 165          
BLAST of mRNA_M-pyrifera_M_contig101705.358.1 vs. uniprot
Match: A0A517P7X7_9PLAN (D-inositol 3-phosphate glycosyltransferase n=1 Tax=Alienimonas californiensis TaxID=2527989 RepID=A0A517P7X7_9PLAN)

HSP 1 Score: 122 bits (307), Expect = 1.100e-30
Identity = 63/107 (58.88%), Postives = 79/107 (73.83%), Query Frame = 1
Query:    4 RAATALWFSSTHRSEAFGLVQVEAMANGCPVINTDIPGSGVPEVSVDQESGLTVPNENPRALADAASALLNDNGLRADLSGRARERAIREYDRSTMINRLCSIYDSI 324
            +AATALWF STHRSE+FG+ Q+EAMA+GCPVINT IPGSGVP VSVD  SGLTV   +P ALA AA+ L     +R +L+  AR RA  E+DR  M+ R+ +IY+ +
Sbjct:  360 KAATALWFPSTHRSESFGIAQIEAMASGCPVINTAIPGSGVPAVSVDGVSGLTVAPGDPAALARAANRLAESPSMRNELADGARRRAFAEFDRDLMLGRVEAIYEEL 466          
BLAST of mRNA_M-pyrifera_M_contig101705.358.1 vs. uniprot
Match: A0A4V0I7Z5_9BACT (Uncharacterized protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A4V0I7Z5_9BACT)

HSP 1 Score: 119 bits (297), Expect = 1.330e-29
Identity = 65/108 (60.19%), Postives = 73/108 (67.59%), Query Frame = 1
Query:    1 YRAATALWFSSTHRSEAFGLVQVEAMANGCPVINTDIPGSGVPEVSVDQESGLTVPNENPRALADAASALLNDNGLRADLSGRARERAIREYDRSTMINRLCSIYDSI 324
            YRAATALWF S  RSE FGLVQVEAMA+GCPVINT IPGSGVP V   ++ GLTVP  +P ALA AA  LL + GLR  LS   R RA  E+D   M  R  +IY  +
Sbjct:  298 YRAATALWFPSIARSEGFGLVQVEAMASGCPVINTAIPGSGVPWVCRHEQEGLTVPPNDPGALAAAADRLLREPGLRGALSLDGRRRAAAEFDHGAMAERSLAIYGGV 405          
BLAST of mRNA_M-pyrifera_M_contig101705.358.1 vs. uniprot
Match: A0A7M2WYP9_9BACT (Glycosyltransferase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7M2WYP9_9BACT)

HSP 1 Score: 116 bits (291), Expect = 1.660e-28
Identity = 62/112 (55.36%), Postives = 75/112 (66.96%), Query Frame = 1
Query:    1 YRAATALWFSSTHRSEAFGLVQVEAMANGCPVINTDIPGSGVPEVSVDQESGLTVPNENPRALADAASALLNDNGLRADLSGRARERAIREYDRSTMINRLCSIYDSIATMR 336
            Y AATA WF S  RSEAFGLVQVEAMA+GCPVINT IP SGVP VS ++ +GLTVP +NP+A A AA  LL + GL   L+   R RAI ++  + M  R   +YD +   R
Sbjct:  285 YHAATAFWFPSNARSEAFGLVQVEAMASGCPVINTAIPDSGVPWVSENEATGLTVPVDNPQAFAAAARRLLENPGLHGRLTSTGRARAIEKFGDAAMAERTIELYDDVFRRR 396          
BLAST of mRNA_M-pyrifera_M_contig101705.358.1 vs. uniprot
Match: A0A538S5U9_9BACT (Glycosyltransferase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A538S5U9_9BACT)

HSP 1 Score: 114 bits (286), Expect = 6.390e-28
Identity = 64/110 (58.18%), Postives = 76/110 (69.09%), Query Frame = 1
Query:    1 YRAATALWFSSTHRSEAFGLVQVEAMANGCPVINTDIPGSGVPEVSVDQESGLTVPNENPRALADAASALLNDNGLRADLSGRARERAIREYDRSTMINRLCSIYDSIAT 330
            Y+AATALWF S  RSE FGLVQVEAMA+GCPVINT I  SGV  VS  +E+GLTV  ++P  LA AA  L+ + GLR  L+  ARERA RE+D+  M  R  +IY  I T
Sbjct:  302 YQAATALWFPSNARSEGFGLVQVEAMASGCPVINTAIEDSGVSWVSRHEETGLTVAVDDPAELARAAHRLITERGLRQRLAAGARERACREFDQRLMAERCLNIYRCILT 411          
BLAST of mRNA_M-pyrifera_M_contig101705.358.1 vs. uniprot
Match: A0A1M3N6U0_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium 68-20 TaxID=1895795 RepID=A0A1M3N6U0_9DELT)

HSP 1 Score: 111 bits (277), Expect = 1.080e-26
Identity = 60/105 (57.14%), Postives = 72/105 (68.57%), Query Frame = 1
Query:    1 YRAATALWFSSTHRSEAFGLVQVEAMANGCPVINTDIPGSGVPEVSVDQESGLTVPNENPRALADAASALLNDNGLRADLSGRARERAIREYDRSTMINRLCSIY 315
            Y AATALWF S  RSEAFGLVQVEAMA+GCPVIN  +P SGV  VS  +++GLTVP ++P ALA AA  LL+D  L A L   ARERA+R++    M      +Y
Sbjct:  293 YHAATALWFPSNARSEAFGLVQVEAMASGCPVINCSVPDSGVAWVSQHEKTGLTVPRDDPGALAAAARRLLDDPRLAARLRAGARERAVRKFGHDRMARESLDLY 397          
BLAST of mRNA_M-pyrifera_M_contig101705.358.1 vs. uniprot
Match: UPI001D138697 (glycosyltransferase n=1 Tax=Dolichospermum sp. LEGE 00246 TaxID=1828605 RepID=UPI001D138697)

HSP 1 Score: 106 bits (265), Expect = 1.550e-26
Identity = 61/108 (56.48%), Postives = 75/108 (69.44%), Query Frame = 1
Query:    1 YRAATALWFSSTHRSEAFGLVQVEAMANGCPVINTDIPGSGVPEVSVDQESGLTVPNENPRALADAASALLNDNGLRADLSGRARERAIREYDRSTMINRLCSIYDSI 324
            Y AATALWF S  RSE FGLVQVEAMA+GCPVIN +IP SGVP VS  ++ GLTVP  N +ALA+AA+ LL   GLR  L   +++RA   ++  +M  R  +IYD I
Sbjct:   82 YHAATALWFPSNVRSEGFGLVQVEAMASGCPVINANIPCSGVPWVSRHEQEGLTVPINNSKALAEAANRLLRQPGLRNRLVKASQDRA-EYFNHISMGERSLNIYDKI 188          
BLAST of mRNA_M-pyrifera_M_contig101705.358.1 vs. uniprot
Match: A0A433NCD9_CHLFR (Glycosyl transferase n=2 Tax=Chlorogloeopsis fritschii TaxID=1124 RepID=A0A433NCD9_CHLFR)

HSP 1 Score: 110 bits (274), Expect = 2.620e-26
Identity = 62/114 (54.39%), Postives = 76/114 (66.67%), Query Frame = 1
Query:    1 YRAATALWFSSTHRSEAFGLVQVEAMANGCPVINTDIPGSGVPEVSVDQESGLTVPNENPRALADAASALLNDNGLRADLSGRARERAIREYDRSTMINRLCSIYDSIATMRPS 342
            Y AATALWF S  RSE FGLVQVEAMA+GCPVIN +IPGSGVP VS D++ GLTVP  +P ALA AA  LL++  LR  L   +R+RA   ++   M  R   +YD + +   S
Sbjct:  281 YHAATALWFPSNLRSEGFGLVQVEAMASGCPVINANIPGSGVPWVSRDEKEGLTVPINDPFALARAAKRLLSEPNLRDRLVKASRKRA-EYFNHMNMAQRSFEVYDKVLSQERS 393          
BLAST of mRNA_M-pyrifera_M_contig101705.358.1 vs. uniprot
Match: UPI0019B59682 (Glycosyltransferase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=UPI0019B59682)

HSP 1 Score: 110 bits (275), Expect = 3.580e-26
Identity = 59/112 (52.68%), Postives = 74/112 (66.07%), Query Frame = 1
Query:    1 YRAATALWFSSTHRSEAFGLVQVEAMANGCPVINTDIPGSGVPEVSVDQESGLTVPNENPRALADAASALLNDNGLRADLSGRARERAIREYDRSTMINRLCSIYDSIATMR 336
            Y AATA WF S  R+EAFG+VQ+EAMA+GCPVINT IP SGV  VS   E+GLTV  ++P ALA AA  L ND+ LR  LS   R RA  ++   TM  R  ++Y+ + + R
Sbjct:  288 YHAATAFWFPSNARTEAFGIVQLEAMASGCPVINTAIPDSGVAWVSKHDETGLTVAMDDPEALAAAACRLANDSALRDRLSDACRARARHDFSHRTMAERSVAVYERVLSRR 399          
BLAST of mRNA_M-pyrifera_M_contig101705.358.1 vs. uniprot
Match: A0A3S5K323_ANAVA (Glycosyl transferase family 1 n=4 Tax=Nostocaceae TaxID=1162 RepID=A0A3S5K323_ANAVA)

HSP 1 Score: 108 bits (270), Expect = 9.840e-26
Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 1
Query:    1 YRAATALWFSSTHRSEAFGLVQVEAMANGCPVINTDIPGSGVPEVSVDQESGLTVPNENPRALADAASALLNDNGLRADLSGRARERAIREYDRSTMINRLCSIYDSI 324
            Y AAT+LWF S  RSE FGLVQVEAMA+GCPVIN +IP SGVP VS  ++ GLTVP  NP ALA+A+  LL + GLR  L+  +R+RA   ++ +TM  R    Y+ +
Sbjct:  280 YHAATSLWFPSNVRSEGFGLVQVEAMASGCPVINANIPCSGVPWVSRHEQEGLTVPINNPVALAEASQRLLREPGLRNRLAAASRKRA-EYFNHTTMAQRSFKFYEEV 386          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101705.358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C6DLQ7_9BACT3.250e-3261.90Glycosyltransferase n=1 Tax=Phycisphaerae bacteriu... [more]
A0A517P7X7_9PLAN1.100e-3058.88D-inositol 3-phosphate glycosyltransferase n=1 Tax... [more]
A0A4V0I7Z5_9BACT1.330e-2960.19Uncharacterized protein n=1 Tax=Gemmataceae bacter... [more]
A0A7M2WYP9_9BACT1.660e-2855.36Glycosyltransferase n=1 Tax=Phycisphaerales bacter... [more]
A0A538S5U9_9BACT6.390e-2858.18Glycosyltransferase n=1 Tax=Planctomycetes bacteri... [more]
A0A1M3N6U0_9DELT1.080e-2657.14Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
UPI001D1386971.550e-2656.48glycosyltransferase n=1 Tax=Dolichospermum sp. LEG... [more]
A0A433NCD9_CHLFR2.620e-2654.39Glycosyl transferase n=2 Tax=Chlorogloeopsis frits... [more]
UPI0019B596823.580e-2652.68Glycosyltransferase n=1 Tax=Anaerolineae bacterium... [more]
A0A3S5K323_ANAVA9.840e-2654.63Glycosyl transferase family 1 n=4 Tax=Nostocaceae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101705contigM-pyrifera_M_contig101705:3..344 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score111.3
Seed ortholog evalue3e-22
Seed eggNOG ortholog211165.AJLN01000051_gene4912
KEGG koko:K00743,ko:K12995
KEGG ReactionR05978,R06169
KEGG Pathwayko00601,map00601
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Glycosyl transferase 4-like
EggNOG OGs1G4HF@1117,COG0438@1,COG0438@2
EC2.4.1.348,2.4.1.87
COG Functional cat.M
CAZyGT4,GT6
Best tax levelCyanobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003,ko01005
Exons1
Model size342
Cds size342
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815515.740542-CDS-M-pyrifera_M_contig101705:2..3441622815515.740542-CDS-M-pyrifera_M_contig101705:2..344Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101705 3..344 +
1692277446.0817661-CDS-M-pyrifera_M_contig101705:2..3441692277446.0817661-CDS-M-pyrifera_M_contig101705:2..344Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101705 3..344 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101705.358.1prot_M-pyrifera_M_contig101705.358.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101705 3..344 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101705.358.1

>prot_M-pyrifera_M_contig101705.358.1 ID=prot_M-pyrifera_M_contig101705.358.1|Name=mRNA_M-pyrifera_M_contig101705.358.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp
YRAATALWFSSTHRSEAFGLVQVEAMANGCPVINTDIPGSGVPEVSVDQE
SGLTVPNENPRALADAASALLNDNGLRADLSGRARERAIREYDRSTMINR
LCSIYDSIATMRPS
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mRNA from alignment at M-pyrifera_M_contig101705:3..344+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101705.358.1 ID=mRNA_M-pyrifera_M_contig101705.358.1|Name=mRNA_M-pyrifera_M_contig101705.358.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=342bp|location=Sequence derived from alignment at M-pyrifera_M_contig101705:3..344+ (Macrocystis pyrifera P11B4 male)
TATCGGGCAGCGACAGCGCTTTGGTTTTCCAGCACACATCGGAGCGAAGC CTTTGGGCTGGTCCAAGTCGAAGCGATGGCCAATGGATGCCCAGTGATCA ATACAGACATTCCCGGGTCCGGAGTCCCCGAGGTGAGTGTCGACCAAGAA TCGGGGCTCACTGTCCCCAATGAAAACCCAAGAGCCCTCGCTGATGCCGC ATCAGCGTTGCTGAACGACAACGGTCTTCGCGCCGATCTGTCCGGGCGTG CCCGTGAACGTGCGATTCGTGAGTACGATCGGTCAACAATGATCAATCGA CTCTGTTCGATCTATGATTCCATTGCCACAATGCGACCGTCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101705:3..344+

>mRNA_M-pyrifera_M_contig101705.358.1 ID=mRNA_M-pyrifera_M_contig101705.358.1|Name=mRNA_M-pyrifera_M_contig101705.358.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig101705:3..344+ (Macrocystis pyrifera P11B4 male)
TATCGGGCAGCGACAGCGCTTTGGTTTTCCAGCACACATCGGAGCGAAGC
CTTTGGGCTGGTCCAAGTCGAAGCGATGGCCAATGGATGCCCAGTGATCA
ATACAGACATTCCCGGGTCCGGAGTCCCCGAGGTGAGTGTCGACCAAGAA
TCGGGGCTCACTGTCCCCAATGAAAACCCAAGAGCCCTCGCTGATGCCGC
ATCAGCGTTGCTGAACGACAACGGTCTTCGCGCCGATCTGTCCGGGCGTG
CCCGTGAACGTGCGATTCGTGAGTACGATCGGTCAACAATGATCAATCGA
CTCTGTTCGATCTATGATTCCATTGCCACAATGCGACCGTCGTATCGGGC
AGCGACAGCGCTTTGGTTTTCCAGCACACATCGGAGCGAAGCCTTTGGGC
TGGTCCAAGTCGAAGCGATGGCCAATGGATGCCCAGTGATCAATACAGAC
ATTCCCGGGTCCGGAGTCCCCGAGGTGAGTGTCGACCAAGAATCGGGGCT
CACTGTCCCCAATGAAAACCCAAGAGCCCTCGCTGATGCCGCATCAGCGT
TGCTGAACGACAACGGTCTTCGCGCCGATCTGTCCGGGCGTGCCCGTGAA
CGTGCGATTCGTGAGTACGATCGGTCAACAATGATCAATCGACTCTGTTC
GATCTATGATTCCATTGCCACAATGCGACCGTCG
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