mRNA_M-pyrifera_M_contig101684.348.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101684.348.1
Unique NamemRNA_M-pyrifera_M_contig101684.348.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig101684.348.1 vs. uniprot
Match: A0A1Y2D987_9FUNG (SET domain-containing protein (Fragment) n=4 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y2D987_9FUNG)

HSP 1 Score: 97.4 bits (241), Expect = 9.700e-23
Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 1 
Query:    1 YIGEVVRQKVADIREKAYEAMGIGSSYLFRIDDDTIIDATMCGNLARFINHHCD 162
            YIGE++RQK+ADIREK YE MGIGSSYLFRIDDDT+IDAT  GNLARFINH CD
Sbjct:  109 YIGEIIRQKIADIREKQYERMGIGSSYLFRIDDDTVIDATKKGNLARFINHCCD 162
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BLAST of mRNA_M-pyrifera_M_contig101684.348.1 vs. uniprot
Match: A0A1Y1XK86_9FUNG (Histone methyltransferase (Fragment) n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XK86_9FUNG)

HSP 1 Score: 95.1 bits (235), Expect = 1.450e-22
Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 1 
Query:    1 YIGEVVRQKVADIREKAYEAMGIGSSYLFRIDDDTIIDATMCGNLARFINHHCD 162
            YIGE++RQK+AD REK YE MGIGSSYLFRIDDDTIIDAT  GNLARFINH CD
Sbjct:   40 YIGEIIRQKIADHREKQYERMGIGSSYLFRIDDDTIIDATKKGNLARFINHCCD 93
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BLAST of mRNA_M-pyrifera_M_contig101684.348.1 vs. uniprot
Match: A0A7S4IK64_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IK64_9EUKA)

HSP 1 Score: 97.4 bits (241), Expect = 6.000e-22
Identity = 47/54 (87.04%), Postives = 48/54 (88.89%), Query Frame = 1 
Query:    1 YIGEVVRQKVADIREKAYEAMGIGSSYLFRIDDDTIIDATMCGNLARFINHHCD 162
            YIGE+VRQKVAD REK YE MGIGSSYLFRIDDDTIIDAT  GNLARFINH CD
Sbjct:  209 YIGEIVRQKVADNREKIYEQMGIGSSYLFRIDDDTIIDATKTGNLARFINHSCD 262
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BLAST of mRNA_M-pyrifera_M_contig101684.348.1 vs. uniprot
Match: A0A197JIA0_9FUNG (SET domain-containing 1Bb n=2 Tax=Mortierellaceae TaxID=4854 RepID=A0A197JIA0_9FUNG)

HSP 1 Score: 92.4 bits (228), Expect = 2.660e-21
Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 1 
Query:    1 YIGEVVRQKVADIREKAYEAMGIGSSYLFRIDDDTIIDATMCGNLARFINHHC 159
            YIGEV+RQKVAD REK YE MGIGSSYLFR+DDDT+IDAT  GN+ARFINH C
Sbjct:   59 YIGEVIRQKVADHREKRYERMGIGSSYLFRVDDDTVIDATKMGNIARFINHCC 111
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BLAST of mRNA_M-pyrifera_M_contig101684.348.1 vs. uniprot
Match: A0A8C3ZWQ1_9TELE (Histone-lysine N-methyltransferase SETD1B-A-like n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZWQ1_9TELE)

HSP 1 Score: 90.5 bits (223), Expect = 3.680e-21
Identity = 39/54 (72.22%), Postives = 48/54 (88.89%), Query Frame = 1 
Query:    1 YIGEVVRQKVADIREKAYEAMGIGSSYLFRIDDDTIIDATMCGNLARFINHHCD 162
            Y+G+V+RQ++AD+RE+ YE  GIGSSYLFR+D DTIIDAT CGNLARFINH C+
Sbjct:    5 YVGQVIRQEIADMRERRYEDEGIGSSYLFRVDQDTIIDATKCGNLARFINHSCN 58
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BLAST of mRNA_M-pyrifera_M_contig101684.348.1 vs. uniprot
Match: A0A3B4BFN7_9GOBI (Uncharacterized protein n=2 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4BFN7_9GOBI)

HSP 1 Score: 90.5 bits (223), Expect = 3.680e-21
Identity = 40/54 (74.07%), Postives = 47/54 (87.04%), Query Frame = 1 
Query:    1 YIGEVVRQKVADIREKAYEAMGIGSSYLFRIDDDTIIDATMCGNLARFINHHCD 162
            Y+GEV+RQ +AD+RE+ YE  GIGSSYLFR+D DTIIDAT CGNLARFINH C+
Sbjct:    5 YVGEVIRQVIADMREQRYEEEGIGSSYLFRVDQDTIIDATKCGNLARFINHSCN 58
[Close]
BLAST of mRNA_M-pyrifera_M_contig101684.348.1 vs. uniprot
Match: A0A672YKS9_9TELE (Uncharacterized protein n=2 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A672YKS9_9TELE)

HSP 1 Score: 89.7 bits (221), Expect = 7.390e-21
Identity = 40/54 (74.07%), Postives = 47/54 (87.04%), Query Frame = 1 
Query:    1 YIGEVVRQKVADIREKAYEAMGIGSSYLFRIDDDTIIDATMCGNLARFINHHCD 162
            Y+G+V+RQ +AD+RE+ YE  GIGSSYLFRID DTIIDAT CGNLARFINH C+
Sbjct:    5 YVGQVIRQVIADMREQRYEEEGIGSSYLFRIDQDTIIDATKCGNLARFINHSCN 58
[Close]
BLAST of mRNA_M-pyrifera_M_contig101684.348.1 vs. uniprot
Match: A0A1Y2CSH6_9FUNG (SET domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CSH6_9FUNG)

HSP 1 Score: 90.5 bits (223), Expect = 8.200e-21
Identity = 44/54 (81.48%), Postives = 45/54 (83.33%), Query Frame = 1 
Query:    1 YIGEVVRQKVADIREKAYEAMGIGSSYLFRIDDDTIIDATMCGNLARFINHHCD 162
            YIGE +RQKVAD REK YE  GIGSSYLFRIDDD IIDAT  GNLARFINH CD
Sbjct:   35 YIGEQIRQKVADHREKIYEKSGIGSSYLFRIDDDNIIDATKAGNLARFINHCCD 88
[Close]
BLAST of mRNA_M-pyrifera_M_contig101684.348.1 vs. uniprot
Match: A0A1S8VV53_9FUNG (Histone-lysine N-methyltransferase SETD1B n=2 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VV53_9FUNG)

HSP 1 Score: 96.3 bits (238), Expect = 9.040e-21
Identity = 44/54 (81.48%), Postives = 49/54 (90.74%), Query Frame = 1 
Query:    1 YIGEVVRQKVADIREKAYEAMGIGSSYLFRIDDDTIIDATMCGNLARFINHHCD 162
            YIGE++RQK+AD REK YEA GIGSSYLFRID+DTIIDAT CGNLARFINH C+
Sbjct: 1333 YIGEIIRQKIADHREKLYEASGIGSSYLFRIDEDTIIDATKCGNLARFINHCCE 1386
[Close]
BLAST of mRNA_M-pyrifera_M_contig101684.348.1 vs. uniprot
Match: A0A3Q3N8G9_9LABR (Uncharacterized protein n=2 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3N8G9_9LABR)

HSP 1 Score: 89.4 bits (220), Expect = 1.050e-20
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 1 
Query:    1 YIGEVVRQKVADIREKAYEAMGIGSSYLFRIDDDTIIDATMCGNLARFINHHCD 162
            Y+G++VRQ +AD+RE+ YE  GIGSSYLFR+D DTIIDAT CGNLARFINH C+
Sbjct:    5 YVGQIVRQVIADMREQRYEEEGIGSSYLFRVDQDTIIDATKCGNLARFINHSCN 58
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101684.348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y2D987_9FUNG9.700e-2383.33SET domain-containing protein (Fragment) n=4 Tax=N... [more]
A0A1Y1XK86_9FUNG1.450e-2283.33Histone methyltransferase (Fragment) n=1 Tax=Anaer... [more]
A0A7S4IK64_9EUKA6.000e-2287.04Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A197JIA0_9FUNG2.660e-2181.13SET domain-containing 1Bb n=2 Tax=Mortierellaceae ... [more]
A0A8C3ZWQ1_9TELE3.680e-2172.22Histone-lysine N-methyltransferase SETD1B-A-like n... [more]
A0A3B4BFN7_9GOBI3.680e-2174.07Uncharacterized protein n=2 Tax=Periophthalmus mag... [more]
A0A672YKS9_9TELE7.390e-2174.07Uncharacterized protein n=2 Tax=Sphaeramia orbicul... [more]
A0A1Y2CSH6_9FUNG8.200e-2181.48SET domain-containing protein n=1 Tax=Rhizoclosmat... [more]
A0A1S8VV53_9FUNG9.040e-2181.48Histone-lysine N-methyltransferase SETD1B n=2 Tax=... [more]
A0A3Q3N8G9_9LABR1.050e-2072.22Uncharacterized protein n=2 Tax=Labrus bergylta Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101684contigM-pyrifera_M_contig101684:3..452 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score66.6
Seed ortholog evalue5.8e-09
Seed eggNOG ortholog7994.ENSAMXP00000009797
Preferred nameSETD1A
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K11422
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,map00310
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000785,GO:0000790,GO:0000791,GO:0002682,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0006325,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0008013,GO:0008134,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016043,GO:0016278,GO:0016279,GO:0016569,GO:0016570,GO:0016571,GO:0016604,GO:0016607,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018024,GO:0018027,GO:0018193,GO:0018205,GO:0019538,GO:0031974,GO:0031981,GO:0032259,GO:0032991,GO:0033043,GO:0033044,GO:0034708,GO:0034968,GO:0035097,GO:0035327,GO:0036211,GO:0042054,GO:0042800,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044648,GO:0045595,GO:0045637,GO:0045652,GO:0048188,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051239,GO:0051276,GO:0051568,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080182,GO:0140096,GO:1901532,GO:1901564,GO:1902036,GO:1902275,GO:1902494,GO:1903706,GO:1990234,GO:2000026,GO:2000736
EggNOG free text desc.SET domain containing 1A
EggNOG OGs38F3T@33154,3BEIA@33208,3CUGA@33213,480CU@7711,494DN@7742,4A0UR@7898,COG2940@1,KOG1080@2759
EC2.1.1.43
COG Functional cat.BK
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Exons2
Model size354
Cds size237
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101684.348.1prot_M-pyrifera_M_contig101684.348.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101684 63..395 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815515.2151613-UTR-M-pyrifera_M_contig101684:2..621622815515.2151613-UTR-M-pyrifera_M_contig101684:2..62Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig101684 3..62 +
1692277445.9095833-UTR-M-pyrifera_M_contig101684:2..621692277445.9095833-UTR-M-pyrifera_M_contig101684:2..62Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig101684 3..62 +
1622815515.2520826-UTR-M-pyrifera_M_contig101684:395..4521622815515.2520826-UTR-M-pyrifera_M_contig101684:395..452Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig101684 396..452 +
1692277445.9419925-UTR-M-pyrifera_M_contig101684:395..4521692277445.9419925-UTR-M-pyrifera_M_contig101684:395..452Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig101684 396..452 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815515.2279475-CDS-M-pyrifera_M_contig101684:62..2151622815515.2279475-CDS-M-pyrifera_M_contig101684:62..215Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101684 63..215 +
1692277445.9244833-CDS-M-pyrifera_M_contig101684:62..2151692277445.9244833-CDS-M-pyrifera_M_contig101684:62..215Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101684 63..215 +
1622815515.2401595-CDS-M-pyrifera_M_contig101684:311..3951622815515.2401595-CDS-M-pyrifera_M_contig101684:311..395Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101684 312..395 +
1692277445.933488-CDS-M-pyrifera_M_contig101684:311..3951692277445.933488-CDS-M-pyrifera_M_contig101684:311..395Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101684 312..395 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101684.348.1

>prot_M-pyrifera_M_contig101684.348.1 ID=prot_M-pyrifera_M_contig101684.348.1|Name=mRNA_M-pyrifera_M_contig101684.348.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=79bp
MGIGSSYLFRIDDDTIIDATMCGNLARFINHHCDVCLLLLCLTLSISHLL
ASLPDNRTAQLLRQGYHGGGGKEDCDLL*
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mRNA from alignment at M-pyrifera_M_contig101684:3..452+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101684.348.1 ID=mRNA_M-pyrifera_M_contig101684.348.1|Name=mRNA_M-pyrifera_M_contig101684.348.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig101684:3..452+ (Macrocystis pyrifera P11B4 male)
TACATTGGAGAAGTAGTCCGCCAGAAGGTGGCGGATATCAGGGAGAAGGC
CTACGAGGCCATGGGCATCGGCAGCAGCTACCTCTTCCGCATCGATGACG
ACACCATCATCGACGCCACCATGTGCGGCAACCTCGCCCGCTTCATCAAC
CACCACTGTGACGTATGTCTCCTTCTTCTCTGCCTAACTCTGTCTATTTC
GCACTTGCTCGCTGTCTCTTTCTCTCACCTCTCTCCCTCTCTCCCTCTCT
CACTCACTCACTCTCTCGCTCACTCTCCTGGCTACATTTCTCTATCCCCC
TCTGTCGAGTCCCTGCCTGACAATAGGACAGCCCAACTGCTACGCCAAGG
TTATCACGGTGGAGGCGGAAAAGAAGATTGTGATTTACTCTAAGCGCGAG
ATCCGCAAGAACGAAGAGATCACCTACGACTACAAGTTCCCCATCGAGGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101684:3..452+

>mRNA_M-pyrifera_M_contig101684.348.1 ID=mRNA_M-pyrifera_M_contig101684.348.1|Name=mRNA_M-pyrifera_M_contig101684.348.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=474bp|location=Sequence derived from alignment at M-pyrifera_M_contig101684:3..452+ (Macrocystis pyrifera P11B4 male)
ATGGGCATCGGCAGCAGCTACCTCTTCCGCATCGATGACGACACCATCAT
CGACGCCACCATGTGCGGCAACCTCGCCCGCTTCATCAACCACCACTGTG
ACGTATGTCTCCTTCTTCTCTGCCTAACTCTGTCTATTTCGCACTTGCTC
GCTATGGGCATCGGCAGCAGCTACCTCTTCCGCATCGATGACGACACCAT
CATCGACGCCACCATGTGCGGCAACCTCGCCCGCTTCATCAACCACCACT
GTGACGTATGTCTCCTTCTTCTCTGCCTAACTCTGTCTATTTCGCACTTG
CTCGCTTCCCTGCCTGACAATAGGACAGCCCAACTGCTACGCCAAGGTTA
TCACGGTGGAGGCGGAAAAGAAGATTGTGATTTACTCTAATCCCTGCCTG
ACAATAGGACAGCCCAACTGCTACGCCAAGGTTATCACGGTGGAGGCGGA
AAAGAAGATTGTGATTTACTCTAA
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