mRNA_M-pyrifera_M_contig101659.340.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101659.340.1 vs. uniprot
Match: A0A3C1KRL3_9GAMM (Ion-translocating oxidoreductase complex subunit C n=11 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KRL3_9GAMM) HSP 1 Score: 429 bits (1103), Expect = 1.400e-146 Identity = 217/222 (97.75%), Postives = 219/222 (98.65%), Query Frame = 1 Query: 1 RVLKGQLIAEPGGHVSVPLHAPTSGMVSAIEDRPIPHPSGFPAPCIVIDCDQEDRWAPLQGVANYRDCEATELLELIRAAGIAGMGGAGFPTAVKLAGKPGRAGKTLIINGTECEPYITADDSLMRERATDIVEGIAILQHIVQPQEVLLGLEDNKPEAIAALRAATAGSAIEVVTFPTKYPSGGEKQLIEILTGQQVPSGGLPGDIGIVCQNVGTAVAVRD 666 +VLKGQLIAEPGGHVSVPLHAPTSGMVSAIEDRPIPHPSGFPAPCIVIDCDQEDRWAPLQGVANYRDCEATELLELIRA GIAGMGGAGFPTAVKLAGKPGRA KTLIINGTECEPYITADDSLMRERATDIVEGIAILQHI+QPQEVLLGLEDNKPEAIAALRAATAGS IEVVTFPTKYPSGGEKQLIEILTGQQVPSGGLPGDIGIVCQNVGTAVAVRD Sbjct: 55 QVLKGQLIAEPGGHVSVPLHAPTSGMVSAIEDRPIPHPSGFPAPCIVIDCDQEDRWAPLQGVANYRDCEATELLELIRAGGIAGMGGAGFPTAVKLAGKPGRAVKTLIINGTECEPYITADDSLMRERATDIVEGIAILQHILQPQEVLLGLEDNKPEAIAALRAATAGSTIEVVTFPTKYPSGGEKQLIEILTGQQVPSGGLPGDIGIVCQNVGTAVAVRD 276
BLAST of mRNA_M-pyrifera_M_contig101659.340.1 vs. uniprot
Match: A0A2E7C3E6_9GAMM (Ion-translocating oxidoreductase complex subunit C n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C3E6_9GAMM) HSP 1 Score: 395 bits (1014), Expect = 4.460e-133 Identity = 199/222 (89.64%), Postives = 210/222 (94.59%), Query Frame = 1 Query: 1 RVLKGQLIAEPGGHVSVPLHAPTSGMVSAIEDRPIPHPSGFPAPCIVIDCDQEDRWAPLQGVANYRDCEATELLELIRAAGIAGMGGAGFPTAVKLAGKPGRAGKTLIINGTECEPYITADDSLMRERATDIVEGIAILQHIVQPQEVLLGLEDNKPEAIAALRAATAGSAIEVVTFPTKYPSGGEKQLIEILTGQQVPSGGLPGDIGIVCQNVGTAVAVRD 666 RVLKGQ+IAEP GHVSVPLHAP+SG +SAIE+RPIPHPSGFPAPCIVIDCD ED WAPLQGVANYRDCEATELLELIR+AGIAGMGGAGFPTAVKLAGK G++ KTLIINGTECEPYITADD LMRERA DIV GIAILQHI+QPQE LLG+EDNKPEAIAAL+AA AGSAIEVVTFPTKYPSGGEKQLIEILTG QVPSGGLPGD+GIVCQNVGTAVAVRD Sbjct: 55 RVLKGQMIAEPVGHVSVPLHAPSSGHISAIEERPIPHPSGFPAPCIVIDCDGEDAWAPLQGVANYRDCEATELLELIRSAGIAGMGGAGFPTAVKLAGKSGQSVKTLIINGTECEPYITADDILMRERADDIVAGIAILQHILQPQETLLGVEDNKPEAIAALQAAAAGSAIEVVTFPTKYPSGGEKQLIEILTGLQVPSGGLPGDLGIVCQNVGTAVAVRD 276
BLAST of mRNA_M-pyrifera_M_contig101659.340.1 vs. uniprot
Match: A0A6C0U3G2_9GAMM (Ion-translocating oxidoreductase complex subunit C n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0U3G2_9GAMM) HSP 1 Score: 344 bits (883), Expect = 2.830e-113 Identity = 173/224 (77.23%), Postives = 198/224 (88.39%), Query Frame = 1 Query: 1 RVLKGQLIAEPGGHVSVPLHAPTSGMVSAIEDRPIPHPSGFPAPCIVIDCDQEDRWAPLQGVANYRDCEATELLELIRAAGIAGMGGAGFPTAVKLAGKPGRAGKTLIINGTECEPYITADDSLMRERATDIVEGIAILQHIVQPQEVLLGLEDNKPEAIAALRAATAGS--AIEVVTFPTKYPSGGEKQLIEILTGQQVPSGGLPGDIGIVCQNVGTAVAVRD 666 +VLKGQLIAE GHVSVPLHAP+SG+V+AI +RPIPHPSG+ A CIVIDCD D+WAPL GVA+YRD E T+LLE IRAAGIAG+GGAGFPTA+KLAGKPG + +TLIINGTECEPYITADD LMRERA DI+ GIAIL+HI+ P++VL+G+EDNKPEAIAALR+A A + +EV+ FPTKYPSGGEKQLIEILTG QVPSGGLP DIGIVCQN+GT VAVRD Sbjct: 55 QVLKGQLIAEARGHVSVPLHAPSSGVVAAIAERPIPHPSGYSAKCIVIDCDGRDQWAPLHGVADYRDHEPTQLLERIRAAGIAGLGGAGFPTAIKLAGKPGASIRTLIINGTECEPYITADDILMRERAGDILAGIAILRHILHPEQVLIGVEDNKPEAIAALRSAAADAEPGLEVIAFPTKYPSGGEKQLIEILTGLQVPSGGLPADIGIVCQNIGTVVAVRD 278
BLAST of mRNA_M-pyrifera_M_contig101659.340.1 vs. uniprot
Match: A0A2N5Y0I1_9GAMM (Ion-translocating oxidoreductase complex subunit C n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y0I1_9GAMM) HSP 1 Score: 337 bits (863), Expect = 2.740e-110 Identity = 164/223 (73.54%), Postives = 190/223 (85.20%), Query Frame = 1 Query: 1 RVLKGQLIAEPGGHVSVPLHAPTSGMVSAIEDRPIPHPSGFPAPCIVIDCDQEDRWAPL-QGVANYRDCEATELLELIRAAGIAGMGGAGFPTAVKLAGKPGRAGKTLIINGTECEPYITADDSLMRERATDIVEGIAILQHIVQPQEVLLGLEDNKPEAIAALRAATAGSAIEVVTFPTKYPSGGEKQLIEILTGQQVPSGGLPGDIGIVCQNVGTAVAVRD 666 RVLKGQLIA GHVSVPLHAP+SG + AIEDRP+PHPSG+ APC+VI+CD D W G+ NYR CE + LLE IR+AGIAGMGGAGFPTAVKLAGKPG TLIINGTECEPYITADD LM+ERA DI+ G+ I++HI++PQE+L G+EDNKP AIAAL+ A AGS +E++TFPTKYPSGGEKQLIEILTG+QVPSGGLP DIG++CQNVGTAVAVR+ Sbjct: 55 RVLKGQLIASAAGHVSVPLHAPSSGQILAIEDRPVPHPSGYSAPCVVIECDGRDEWVEEPSGIRNYRACEPSALLEKIRSAGIAGMGGAGFPTAVKLAGKPGAGITTLIINGTECEPYITADDILMQERAADILAGVDIMRHILKPQEILFGIEDNKPAAIAALKTAAAGSDVEIITFPTKYPSGGEKQLIEILTGKQVPSGGLPADIGVICQNVGTAVAVRN 277
BLAST of mRNA_M-pyrifera_M_contig101659.340.1 vs. uniprot
Match: A0A7W2TVN4_9GAMM (Ion-translocating oxidoreductase complex subunit C n=1 Tax=Sediminihaliea albiluteola TaxID=2758564 RepID=A0A7W2TVN4_9GAMM) HSP 1 Score: 331 bits (848), Expect = 6.690e-107 Identity = 168/221 (76.02%), Postives = 185/221 (83.71%), Query Frame = 1 Query: 1 RVLKGQLIAEPGGHVSVPLHAPTSGMVSAIEDRPIPHPSGFPAPCIVIDCDQEDRWAPLQGVANYRDCEATELLELIRAAGIAGMGGAGFPTAVKLAGKPGRAGKTLIINGTECEPYITADDSLMRERATDIVEGIAILQHIVQPQEVLLGLEDNKPEAIAALRAATAGSAIEVVTFPTKYPSGGEKQLIEILTGQQVPSGGLPGDIGIVCQNVGTAVAVR 663 RVLKGQ+IAE GG VSVP HAP+SG V AIEDR IPHPSGF APCIVI+CD +D W PLQG+ANY + ELL+LIR AGIAGMGGAGFP AVKL GKP +TLIINGTECEPYITADD+LMRERA DI+ G+ ILQHIV+P E L+G+EDNKPE I ALR A GS IEVV FPTKYPSGGEKQLIEILTG+QVPSGGLP DIGIVCQN+GT VAV+ Sbjct: 55 RVLKGQVIAEAGGFVSVPQHAPSSGTVIAIEDRAIPHPSGFHAPCIVIECDGKDEWLPLQGLANYSERSPEELLDLIREAGIAGMGGAGFPAAVKLKGKPESQIQTLIINGTECEPYITADDALMRERAEDIITGVKILQHIVKPTETLIGVEDNKPEGIVALREAAQGSDIEVVEFPTKYPSGGEKQLIEILTGKQVPSGGLPADIGIVCQNLGTTVAVQ 275
BLAST of mRNA_M-pyrifera_M_contig101659.340.1 vs. uniprot
Match: UPI0019D39549 (electron transport complex subunit RsxC n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D39549) HSP 1 Score: 325 bits (833), Expect = 1.290e-104 Identity = 165/222 (74.32%), Postives = 180/222 (81.08%), Query Frame = 1 Query: 1 RVLKGQLIAEPGGHVSVPLHAPTSGMVSAIEDRPIPHPSGFPAPCIVIDCDQEDRWAPLQGVANYRDCEATELLELIRAAGIAGMGGAGFPTAVKLAGKPGRAGKTLIINGTECEPYITADDSLMRERATDIVEGIAILQHIVQPQEVLLGLEDNKPEAIAALRAATAGSAIEVVTFPTKYPSGGEKQLIEILTGQQVPSGGLPGDIGIVCQNVGTAVAVRD 666 RVLKGQ+IAE GG VSVP HAP+SG V AIE+RPIPHPSGF APC+VI+CD D W P G+ NY +ELLE IR AGIAGMGGAGFP AVKL KPG TLIINGTECEPYITADD+LMRERA DI+ G IL+HIV P E L+G+EDNKPE IAALRAA S IEVV FPTKYPSGGEKQLIEILTG+QVPSGGLP DIG+VCQN+GT VAVRD Sbjct: 55 RVLKGQVIAEAGGFVSVPQHAPSSGTVIAIEERPIPHPSGFRAPCVVIECDGRDEWLPHTGIDNYPGVSPSELLEHIREAGIAGMGGAGFPAAVKLRQKPGATVDTLIINGTECEPYITADDALMRERAADIIAGAEILRHIVGPAETLIGVEDNKPEGIAALRAAAGDSGIEVVEFPTKYPSGGEKQLIEILTGKQVPSGGLPADIGVVCQNLGTTVAVRD 276
BLAST of mRNA_M-pyrifera_M_contig101659.340.1 vs. uniprot
Match: A0A2D8IVU2_9GAMM (Ion-translocating oxidoreductase complex subunit C n=2 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D8IVU2_9GAMM) HSP 1 Score: 313 bits (803), Expect = 2.500e-101 Identity = 162/223 (72.65%), Postives = 181/223 (81.17%), Query Frame = 1 Query: 1 RVLKGQLIAEPGGHVSVPLHAPTSGMVSAIEDRPIPHPSGFPAPCIVIDCDQEDRWAPLQGV-ANYRDCEATELLELIRAAGIAGMGGAGFPTAVKLAGKPGRAGKTLIINGTECEPYITADDSLMRERATDIVEGIAILQHIVQPQEVLLGLEDNKPEAIAALRAATAGSAIEVVTFPTKYPSGGEKQLIEILTGQQVPSGGLPGDIGIVCQNVGTAVAVRD 666 +VLKGQL+A VS P+HAPTSG VSAIE+RP+PHPSG APCIV++CD EDRW L A+YR+ E LLE IR AGIAGMGGAGFPTAVKL TLIING ECEPYITADDSLMRERA DI+EG+A+L+HI++P+EVL+GLEDNKPEAI ALR A +EVV FPTKYPSGGEKQLIEILTG+QVPSGGLP DIGIVCQNVGTAVAVRD Sbjct: 55 QVLKGQLLAAASSLVSAPVHAPTSGTVSAIEERPVPHPSGLSAPCIVLECDGEDRWVELPAPPADYRELEIPALLERIRDAGIAGMGGAGFPTAVKLTSGTHHHIDTLIINGPECEPYITADDSLMRERAADILEGVAVLRHILRPREVLIGLEDNKPEAIEALRHAIGDQPVEVVVFPTKYPSGGEKQLIEILTGRQVPSGGLPADIGIVCQNVGTAVAVRD 277
BLAST of mRNA_M-pyrifera_M_contig101659.340.1 vs. uniprot
Match: A0A5C8ZNI9_9GAMM (Ion-translocating oxidoreductase complex subunit C n=1 Tax=Parahaliea aestuarii TaxID=1852021 RepID=A0A5C8ZNI9_9GAMM) HSP 1 Score: 316 bits (810), Expect = 3.700e-101 Identity = 160/222 (72.07%), Postives = 182/222 (81.98%), Query Frame = 1 Query: 1 RVLKGQLIAEPGGHVSVPLHAPTSGMVSAIEDRPIPHPSGFPAPCIVIDCDQEDRWAPLQGVANYRDCEATELLELIRAAGIAGMGGAGFPTAVKLAGKPGRAGKTLIINGTECEPYITADDSLMRERATDIVEGIAILQHIVQPQEVLLGLEDNKPEAIAALRAATAGSAIEVVTFPTKYPSGGEKQLIEILTGQQVPSGGLPGDIGIVCQNVGTAVAVRD 666 RVLKGQ+IAE G VSVP HAP+SG V+AIE+RPIPHPSGF A CIVIDCD D W P +G+ NY ++LLE IR AGIAGMGGAGFP+AVKL KPG + TLIINGTECEPYITADD+LMRE A +IV G IL+HIV P+ L+G+EDNKPE IAAL+AA G+ IE+V FPTKYPSGGEKQLIEILTG+QVPSGGLP D+G+VCQNVGTAVAV D Sbjct: 55 RVLKGQVIAEAAGFVSVPQHAPSSGTVAAIEERPIPHPSGFHALCIVIDCDGRDEWLPHRGLENYEGESPSDLLEHIREAGIAGMGGAGFPSAVKLKEKPGASIDTLIINGTECEPYITADDALMREHAAEIVAGAEILRHIVGPKNTLIGVEDNKPEGIAALQAAAEGTGIEIVVFPTKYPSGGEKQLIEILTGRQVPSGGLPADVGVVCQNVGTAVAVYD 276
BLAST of mRNA_M-pyrifera_M_contig101659.340.1 vs. uniprot
Match: A0A5C8ZX36_9GAMM (Ion-translocating oxidoreductase complex subunit C n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C8ZX36_9GAMM) HSP 1 Score: 315 bits (808), Expect = 7.180e-101 Identity = 161/222 (72.52%), Postives = 181/222 (81.53%), Query Frame = 1 Query: 1 RVLKGQLIAEPGGHVSVPLHAPTSGMVSAIEDRPIPHPSGFPAPCIVIDCDQEDRWAPLQGVANYRDCEATELLELIRAAGIAGMGGAGFPTAVKLAGKPGRAGKTLIINGTECEPYITADDSLMRERATDIVEGIAILQHIVQPQEVLLGLEDNKPEAIAALRAATAGSAIEVVTFPTKYPSGGEKQLIEILTGQQVPSGGLPGDIGIVCQNVGTAVAVRD 666 RVLKGQ+IA+ G VSV HAP+SG V+AIE+R IPHPSGF APCIVIDCD +D W P +GV N+ +LLELIR AGIAGMGGAGFP+AVKL KPG TLIINGTECEPYITADD+LMRERA DIV G IL+HIV PQ L+G+EDNKPE I AL+AA G+ IE+V FPTKYPSGGEKQLIEILTG+QVPSGGLP D+GIVCQNVGTAVAV + Sbjct: 55 RVLKGQVIADANGFVSVSQHAPSSGTVAAIEERAIPHPSGFYAPCIVIDCDGQDEWLPHRGVENFEGESPGDLLELIREAGIAGMGGAGFPSAVKLREKPGATVDTLIINGTECEPYITADDALMRERAADIVAGADILRHIVGPQATLIGVEDNKPEGILALQAAAEGTGIEIVVFPTKYPSGGEKQLIEILTGRQVPSGGLPADVGIVCQNVGTAVAVYE 276
BLAST of mRNA_M-pyrifera_M_contig101659.340.1 vs. uniprot
Match: UPI000E2EB143 (electron transport complex subunit RsxC n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI000E2EB143) HSP 1 Score: 315 bits (808), Expect = 7.540e-101 Identity = 162/222 (72.97%), Postives = 180/222 (81.08%), Query Frame = 1 Query: 1 RVLKGQLIAEPGGHVSVPLHAPTSGMVSAIEDRPIPHPSGFPAPCIVIDCDQEDRWAPLQGVANYRDCEATELLELIRAAGIAGMGGAGFPTAVKLAGKPGRAGKTLIINGTECEPYITADDSLMRERATDIVEGIAILQHIVQPQEVLLGLEDNKPEAIAALRAATAGSAIEVVTFPTKYPSGGEKQLIEILTGQQVPSGGLPGDIGIVCQNVGTAVAVRD 666 RVLKGQ+IAE G VSVP HAPTSG V AIE R IPHPSGF APCIVIDCD D W P +G+ NY ++LLE IR AGIAGMGGAGFP+AVKL KPG + TLIINGTECEPYITADD+LMRE A DIV G IL+HIV P++ L+G+EDNKPE I AL+AA G+ IEVV FPTKYPSGGEKQLIEILTG+QVPSGGLP D+G+VCQNVGTAVAV D Sbjct: 55 RVLKGQVIAEAAGFVSVPQHAPTSGTVVAIEARAIPHPSGFHAPCIVIDCDGLDEWLPHRGLENYEGESPSDLLEHIREAGIAGMGGAGFPSAVKLKEKPGASIDTLIINGTECEPYITADDALMREHAADIVAGAEILRHIVGPKDTLIGVEDNKPEGIRALKAAAEGTGIEVVVFPTKYPSGGEKQLIEILTGRQVPSGGLPADVGVVCQNVGTAVAVVD 276 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101659.340.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101659.340.1 >prot_M-pyrifera_M_contig101659.340.1 ID=prot_M-pyrifera_M_contig101659.340.1|Name=mRNA_M-pyrifera_M_contig101659.340.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=222bp RVLKGQLIAEPGGHVSVPLHAPTSGMVSAIEDRPIPHPSGFPAPCIVIDCback to top mRNA from alignment at M-pyrifera_M_contig101659:1..666- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101659.340.1 ID=mRNA_M-pyrifera_M_contig101659.340.1|Name=mRNA_M-pyrifera_M_contig101659.340.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig101659:1..666- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101659:1..666- >mRNA_M-pyrifera_M_contig101659.340.1 ID=mRNA_M-pyrifera_M_contig101659.340.1|Name=mRNA_M-pyrifera_M_contig101659.340.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1332bp|location=Sequence derived from alignment at M-pyrifera_M_contig101659:1..666- (Macrocystis pyrifera P11B4 male)back to top |