mRNA_M-pyrifera_M_contig10161.336.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10161.336.1
Unique NamemRNA_M-pyrifera_M_contig10161.336.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig10161.336.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI)

HSP 1 Score: 345 bits (885), Expect = 5.320e-105
Identity = 179/462 (38.74%), Postives = 280/462 (60.61%), Query Frame = 1
Query:    1 CFNVPENTQSGGGVSTIKDIEVNPGFWRSSESGSIVLQCHNEDACTGGT--DTGSCDAGYDGVYCATCSDGYSMSPGFVCTKCGDWGNVVISLFILCVLIFLTGCVVYLVRGLPYCQGNRR---------------MNLYSLRIVIVVWQIVSQFSLVTNTTYPDIYERFIDIVGSIGFNLDWIMGLSCDLDTDFHSKLFVVTVCPMLLSFLAAVTYL---FSDKSSDS-----FRRHVSFLLLVSFYVFSPVSTTLFQMFSCETLEDGREFLRADYSIQCTSDKHKALQGYSVFMLIMYVIGIPAAYSVIIYKNRLSFDDDN---------VASSLWNSYRPGARYFEIIELLRRVMMTGVIVFIYPDSAPQVAVTLIFAVVFIVISMTINPYAEKSSNVLSTVGHLIVFFTVYISLLYKVDLSDENSDSQDAFAYVIVIVHLLLFFSIFIEL---WCSIR 1275
            C    ENT+S G  ++I+DI ++PG+WR++ + + VL C+N DAC GG   + G C  GY G YCA C++ Y  +  F CTKC     V +       +IF++   V     + Y   N R               ++  SL+IV+VVWQI++QFS V N TYP IY+RF+D++  + F++ W++   C +D DFH  L   T+ P+++  +   TY    + ++ SD      FR+HVS +LLV+F V+S VS+T+F+MF C+ L D   +LRADYSIQC+S KH+ALQ ++VFM+++Y +GIP  Y +++Y  R +  D +           S+LW  Y P   Y E++E  RR+++TGV+VFIYP+SA Q+A++L+    F+VIS  + P+A      +S  GH+++F T++++LL KVD+SDE   SQ  FA ++V+ +L+LF +   E+   WC+++
Sbjct:  569 CTETLENTRSDGANTSIEDIRIDPGYWRATTTTTTVLACYNADACLGGITGEAGYCREGYYGPYCAICTENYGRTMAFECTKCSSGEGVAVG------VIFVSALAVGGAALVAYLVSNEREGXXXXXLIVLVKDKVSFRSLKIVVVVWQILTQFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSDEAIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREALKDGSCRQAHPQAKTISALWEPYTPKRYYNEVVECGRRMLLTGVVVFIYPNSAAQIAISLLMTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILVVTNLVLFGAAVAEMVWMWCAVK 1024          
BLAST of mRNA_M-pyrifera_M_contig10161.336.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 3.800e-104
Identity = 185/452 (40.93%), Postives = 281/452 (62.17%), Query Frame = 1
Query:    1 CFNVPENTQSGGGVSTIKDIEVNPGFWRSSESGSIVLQCHNEDACTGG--TDTGSCDAGYDGVYCATCSDGYSMSPGFVCTKC-GDWGNVVISLFILCVLIFLTGCVVYLVRGLPY--CQGNRR---------MNLYSLRIVIVVWQIVSQFSLVTNTTYPDIYERFIDIVGSIGFNLDWIMGLSCDLDTDFHSKLFVVTVCPMLLSFLAAVTYLFSDKSSDSFR--------RHVSFLLLVSFYVFSPVSTTLFQMFSCETLEDGREFLRADYSIQCTSDKHKALQGYSVFMLIMYVIGIPAAYSVIIYKNRLSFDDDNVA-----------SSLWNSYRPGARYFEIIELLRRVMMTGVIVFIYPDSAPQVAVTLIFAVVFIVISMTINPYAEKSSNVLSTVGHLIVFFTVYISLLYKVDLSDENSDSQDAFAYVIVIVHLLLFFSIFIE 1257
            C    ++T+S GG +TI+ +E++ G+WR++   + VL C+NEDAC GG   D   C  GY+G YC+ CS+GYSMS  F CT+C  D G + I +    V +F+ G  + L   L     +G RR         + L S++IV+VVWQI++QFS V N TYPD+Y+RF+D V  + F++ WI    C ++ DFH +L V T+ P++   L A+TY  + + S            +H+S +LL++F V+S VS T+FQ F+CE L+D +++LRADY I+C S +H+A Q ++  M+++Y +GIP  Y  ++YK+R     ++             S LW  Y+PG  Y+E+IE +RR+ +TGV+VFIYP++A QVAVTL+ A  F+V S+ + PY  K    +S VGH+IVF ++Y +LL KVD+SDE +DSQ+ FA V+V  H  +  ++ +E
Sbjct: 1300 CVVQLDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVV---VGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVE 1748          
BLAST of mRNA_M-pyrifera_M_contig10161.336.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 346 bits (887), Expect = 4.230e-103
Identity = 172/450 (38.22%), Postives = 282/450 (62.67%), Query Frame = 1
Query:    1 CFNVPENTQSGGGVSTIKDIEVNPGFWRSSESGSIVLQCHNEDACTGGTD--TGSCDAGYDGVYCATCSDGYSMSPGFVCTKCGD--WGNVVISLFILCVLIFLTGCVVYLVRGLPYCQGN---------RRMNLYSLRIVIVVWQIVSQFSLVTNTTYPDIYERFIDIVGSIGFNLDWIMGLSCDLDTDFHSKLFVVTVCPMLLSFLAAVTYLFS--------DKSSDSFRRHVSFLLLVSFYVFSPVSTTLFQMFSCETLEDGREFLRADYSIQCTSDKHKALQGYSVFMLIMYVIGIPAAYSVIIYKNRLSFDDDNV----------ASSLWNSYRPGARYFEIIELLRRVMMTGVIVFIYPDSAPQVAVTLIFAVVFIVISMTINPYAEKSSNVLSTVGHLIVFFTVYISLLYKVDLSDENSDSQDAFAYVIVIVHLLLFFSIFIE 1257
            C  V +++ S GG  T++ + ++ GFWR+S S + VL C++ DAC GG    +G C+ GY+G YC  CSDGY+    F C+KC +   G + +++ +  +++FL   VV  V       G          R + L SL+IVIV WQI++QF+ V N TYPD+Y+  +D++    F+L W++   C +D +FH +L V T+ P++   L A TY  +        +K +  + +HV+ +LL++F+V+S VS+TLF+ F+C+ L+  +++LRADYSI+C S +H+ +Q Y+ FM+++Y +GIPA Y+ +++K+R    D++            S+LW  Y+P   Y+E+IE  RRV++ GV+VFIYP++A Q+AVTL+ A  F ++S  + PYA +    +S VGH++VF ++Y++LL KVD+SDE + SQ+ F  V+V VH+ +   + +E
Sbjct: 1035 CTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVE 1484          
BLAST of mRNA_M-pyrifera_M_contig10161.336.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 1.180e-100
Identity = 183/468 (39.10%), Postives = 284/468 (60.68%), Query Frame = 1
Query:    1 CFNVPENTQSGGGVSTIKDIEVNPGFWRSSESGSIVLQCHNEDACTGGTDTGS---CDAGYDGVYCATCSDGYSMSPGFVCTKCGDW-GNVVISLFILCVLIFLTGCVV-YLVRGLPYCQG-------NRRMNLYSLRIVIVVWQIVSQFSLVTNTTYPDIYERFIDIVGSIGFNLDWIMGLSCDLDTDFHSKLFVVTVCPMLLSFLAAVTYLFSDKSSDS--------FRRHVSFLLLVSFYVFSPVSTTLFQMFSCETLEDGREFLRADYSIQCTSDKHKALQGYSVFMLIMYVIGIPAAYSVIIYKNR--LSFDDDN------VAS--SLWNSYRPGARYFEIIELLRRVMMTGVIVFIYPDSAPQVAVTLIFAVVFIVISMTINPYAEKSSNVLSTVGHLIVFFTVYISLLYKVDLSDENSDSQDAFAYVIVIVHLLLFFSIFIE---LWCSIRGVKELLDPCP 1305
            C +V  +++S GG+ T++ + ++PG+WR++ S + VL C+N DAC GG  TG+   C  GY+G YCA CSD YS   GF C+KC +  G ++++  +  + +F    VV Y+   +    G        R + L +L+I++V WQIV+QF+   N TYPD+Y+RF++ +    F++ W++   C +D DFH +L + T+ P++     A TY    + +          + RHVS +LL+ F V+S VS+ +FQ F+C+ LE G E+LRADY I+C S KH+  + Y+ FM+++Y +GIPA Y  ++ ++R  L  D D       VAS  +LW  YRP   Y+E+IE  RR+++TG++VFIYP++A Q+A+TLI  VVF V+S  + PYA+     +S V H +VF +VY++LL KVD+S+E   SQ  F  V+V  H  +  ++ +E   L C  R VKE  +P P
Sbjct:  542 CSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGI-TGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSR-VKEQDEPAP 1007          
BLAST of mRNA_M-pyrifera_M_contig10161.336.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 2.450e-99
Identity = 180/448 (40.18%), Postives = 269/448 (60.04%), Query Frame = 1
Query:    1 CFNVPENTQSGGGVSTIKDIEVNPGFWRSSESGSIVLQCHNEDACTGGTD--TGSCDAGYDGVYCATCSDGYSMSPGFVCTKC-GDWGNV----VISLFILCVLIFLTGCV----VYLVRGLPYCQGNRRMNLYSLRIVIVVWQIVSQFSLVTNTTYPDIYERFIDIVGSIGFNLDWIMGLSCDLDTDFHSKLFVVTVCPML-LSFLA---AVTYLFSDKSSDSFR----RHVSFLLLVSFYVFSPVSTTLFQMFSCETLEDGREFLRADYSIQCTSDKHKALQGYSVFMLIMYVIGIPAAYSVIIYKNRLSFDDDNV----------ASSLWNSYRPGARYFEIIELLRRVMMTGVIVFIYPDSAPQVAVTLIFAVVFIVISMTINPYAEKSSNVLSTVGHLIVFFTVYISLLYKVDLSDENSDSQDAFAYVIVIVHLLLFFSIFIE 1257
            C +V E+  S GG  T++D+ V  G+WR+S S   V  C+N DAC GG     G C  GY+G YCA CSDGY+    F CT+C G  G +    V+++ +LCV   +        V  VR     +  + + L S++IVIV WQI++QF+ V N TYPD+Y+RF+D +    F+L W++   C  D DFH +L   TV P++ L FLA   A     +   ++S +    +HVS +LL++F ++S VS TLF+ F CE LEDG  +LRADY+I C S KHKA Q Y+ FM+++YV+GIPA Y+ +++++R    D +            S LW  Y+P   Y+E+IE  RRV++ GV+VFI+P++A Q+A+TL+ A  F+++S  + P+A K    L+  GH +VF ++YI+LL KVD+S E + SQ  +  V+V  H  +  ++  E
Sbjct:  781 CTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTE 1228          
BLAST of mRNA_M-pyrifera_M_contig10161.336.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 335 bits (860), Expect = 6.620e-99
Identity = 179/448 (39.96%), Postives = 271/448 (60.49%), Query Frame = 1
Query:    1 CFNVPENTQSGGGVSTIKDIEVNPGFWRSSESGSIVLQCHNEDACTGGT--DTGSCDAGYDGVYCATCSDGYSMSPGFVCTKCGDW-GNVVISLFILCVLIFLTGCVVYLVRGLPYCQGNR----RMNLY----SLRIVIVVWQIVSQFSLVTNTTYPDIYERFIDIVGSIGFNLDWIMGLSCDLDTDFHSKLFVVTVCPMLLSFLAAVTYLFSDKSSDS--------FRRHVSFLLLVSFYVFSPVSTTLFQMFSCETLEDGREFLRADYSIQCTSDKHKALQGYSVFMLIMYVIGIPAAYSVIIYKNR-----LSFDDDNVA-----SSLWNSYRPGARYFEIIELLRRVMMTGVIVFIYPDSAPQVAVTLIFAVVFIVISMTINPYAEKSSNVLSTVGHLIVFFTVYISLLYKVDLSDENSDSQDAFAYVIVIVHLLLFFSIFIE 1257
            C    E+T S GG + I  + V+ GFWR++     VL C+N +AC  G    +GSC  GY+G YC+ CSDGY+    F C++C D  G ++++ F+  V + +   VV  V      +G+R    R+  Y    S +IV+V WQI++QF+ V N TYPD+Y+RF+D +G   F+L W++   C +  DFH +L + T+ P++       TY  + + +          + RHVS +LL++ +V+S VS+TLFQ F+CE+L DG  +LRADY I C S KHKALQ Y+  M+++Y +GIPA Y V+++++R        D +  A     S LW  Y+P   Y+E+IE  RRV++ GV+VFIYP++APQ+A+TL+ A  F+V+S  + PYA +    LS +GH +VF ++Y++LL KVD+S+E  +SQ  F  V+V  H  +   I IE
Sbjct: 1592 CALAMEHTGSAGGTNNITLLRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIE 2039          
BLAST of mRNA_M-pyrifera_M_contig10161.336.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 2.410e-98
Identity = 185/465 (39.78%), Postives = 276/465 (59.35%), Query Frame = 1
Query:    1 CFNVPENTQSGGGVSTIKDIEVNPGFWRSSESGSIVLQCHNEDACTGGTDTGS---CDAGYDGVYCATCSDGYSMSPGFVCTKCGDW-GNVVISLFI-LCVLIFLTGCVVYLVRGLPYCQGNRR---------MNLYSLRIVIVVWQIVSQFSLVTNTTYPDIYERFIDIVGSIGFNLDWIMGLSCDLDTDFHSKLFVVTVCPML-LSFLAAVTYLF---SDKSSDSFRR----HVSFLLLVSFYVFSPVSTTLFQMFSCETLEDGREFLRADYSIQCTSDKHKALQGYSVFMLIMYVIGIPAAYSVIIYKN-----RLSFDDDNVA-----SSLWNSYRPGARYFEIIELLRRVMMTGVIVFIYPDSAPQVAVTLIFAVVFIVISMTINPYAEKSSNVLSTVGHLIVFFTVYISLLYKVDLSDENSDSQDAFAYVIVIVHLLLFFSIFIE-------LWCSIRG 1278
            C +  E++ S GG  T+  + + PG+WR++ S   VL+C+N DAC GG  TGS   C  GY+G YCA CS GY+   G  C+KC D  G++ + + + +  L+F    V Y V G    +G  R         + L S++IVIV WQI++QF+ V N  +P +Y+RF+D +    F+L W++   C  D DFH +L V T+ P++ L FLAAV       S +SS+  +R    HVS +LL++F V++ VS  LFQ F+CE L+D + +LRADY I+C S KH A Q Y+ FM+++Y +GIPA Y   ++++     R   D + +A     + LW  YRP   Y+E+IE  RRV++ GV+VFIYP++A Q+AV L+ AVVF +IS  + PYA +    L  +GH +V  ++Y++LL KVD+SDE + SQ  F  ++V  H+ +   + +E       LW   RG
Sbjct:  502 CSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGV-TGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSG--ESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRG 963          
BLAST of mRNA_M-pyrifera_M_contig10161.336.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 3.010e-97
Identity = 171/451 (37.92%), Postives = 274/451 (60.75%), Query Frame = 1
Query:    1 CFNVPENTQSGGGVSTIKDIEVNPGFWRSSESGSIVLQCHNEDACTGGTD--TGSCDAGYDGVYCATCSDGYSMSPGFVCTKC-GDWGNVVISLFILCVLIFLTGCVV-YLVRGLPYCQGNRRMN----------LYSLRIVIVVWQIVSQFSLVTNTTYPDIYERFIDIVGSIGFNLDWIMGLSCDLDTDFHSKLFVVTVCPMLLSFLAAVTYLFSDK----SSDSFR----RHVSFLLLVSFYVFSPVSTTLFQMFSCETLEDGREFLRADYSIQCTSDKHKALQGYSVFMLIMYVIGIPAAYSVIIYKNRLSFDDDNV----------ASSLWNSYRPGARYFEIIELLRRVMMTGVIVFIYPDSAPQVAVTLIFAVVFIVISMTINPYAEKSSNVLSTVGHLIVFFTVYISLLYKVDLSDENSDSQDAFAYVIVIVHLLLFFSIFIE 1257
            C +V ++  S GG  T++ + ++PG+WR++ S   +L C+N DAC GG     G C   Y+G YC+ CSDGY+ + G+ C+KC    G +V ++ +  + +F+   V+ Y++ G     G RRM           L S++IVIV WQI++QF+   N  YP +Y++F+D +   GF+L W+M   C LD  FH +L   T+ P+    L A TY  + +    +++  R    +HV   LL++F V+S VS+TLF+ F+C+ LEDG+ +LR DY I+C S KHK  Q Y+ FM+++Y +GIP  YS++++K+R     D             S LW  Y+P   Y+E+IE  RR+++TG++VFIYP++A Q+A+TL+ A  F ++S  I+PY+ +    ++ +GH++V  ++Y++LL KVD+SDE +DSQ  F  V+V VH  +  S+ +E
Sbjct:  952 CSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEA---GERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVE 1399          
BLAST of mRNA_M-pyrifera_M_contig10161.336.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 325 bits (834), Expect = 7.580e-96
Identity = 171/451 (37.92%), Postives = 276/451 (61.20%), Query Frame = 1
Query:    1 CFNVPENTQSGGGVSTIKDIEVNPGFWRSSESGSIVLQCHNEDACTGGTD--TGSCDAGYDGVYCATCSDGYSMSPGFVCTKC-GDWGNVVISLFILCVLIFLTGCVV-YLVRGLPYCQGNRRMNLY----------SLRIVIVVWQIVSQFSLVTNTTYPDIYERFIDIVGSIGFNLDWIMGLSCDLDTDFHSKLFVVTVCPMLLSFLAAVTYLFSDK----SSDSFR----RHVSFLLLVSFYVFSPVSTTLFQMFSCETLEDGREFLRADYSIQCTSDKHKALQGYSVFMLIMYVIGIPAAYSVIIYKNRLSFDDDNV----------ASSLWNSYRPGARYFEIIELLRRVMMTGVIVFIYPDSAPQVAVTLIFAVVFIVISMTINPYAEKSSNVLSTVGHLIVFFTVYISLLYKVDLSDENSDSQDAFAYVIVIVHLLLFFSIFIE 1257
            C +V +++ S GG  T++ + ++PG+WR++ S   +L C+N DAC GG     G C   Y+G YC+ CS+GY+ + G+ C+KC    G +  ++ +  V +F+   V+ Y++ G     G RR+ ++          S++IVIV WQIV+QF+   N  YP +Y++FID +   GF+L W++ + C LD DFH +L   T+ P+    L A TY  + +    +++  R    +HV   LL++F V+S VS+TLF+ F+C+ LEDG  +LR DY I+C S KHK  Q Y+ FM+++Y +GIP  YS++++++R     D             S LW  Y+P   Y+E+IE  RRV++TG+IVFIYP++A Q+A+TL+ A  F ++S  ++PY+ +    ++ +GH++V  +VY++LL KVD+SDE +DSQ  F  V+V VH  +  S+ +E
Sbjct: 1012 CSDVMDHSTSPGGNVTLETLLIDPGYWRATSSSKKILPCYNADACLGGVTGTAGYCLESYEGPYCSICSNGYASNLGYSCSKCFSRSGGIAFAVGLAVVAVFVAVVVIRYIMSGEA---GERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGN-YLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVE 1458          
BLAST of mRNA_M-pyrifera_M_contig10161.336.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 322 bits (824), Expect = 2.910e-94
Identity = 171/450 (38.00%), Postives = 266/450 (59.11%), Query Frame = 1
Query:    1 CFNVPENTQSGGGVSTIKDIEVNPGFWRSSESGSIVLQCHNEDACTGGTD--TGSCDAGYDGVYCATCSDGYSMSPGFVCTKCGD---WGNVVISLFILCVLIFLTGCVVYLVRGLPY----CQGNRRMNLY----SLRIVIVVWQIVSQFSLVTNTTYPDIYERFIDIVGSIGFNLDWIMGLSCDLDTDFHSKLFVVTVCPMLLSFLAAVTYLFS--------DKSSDSFRRHVSFLLLVSFYVFSPVSTTLFQMFSCETLEDGREFLRADYSIQCTSDKHKALQGYSVFMLIMYVIGIPAAYSVIIYKNRLSFDDDNVA----------SSLWNSYRPGARYFEIIELLRRVMMTGVIVFIYPDSAPQVAVTLIFAVVFIVISMTINPYAEKSSNVLSTVGHLIVFFTVYISLLYKVDLSDENSDSQDAFAYVIVIVHLLLFFSIFIE 1257
            C  V E+  S GG  T++ + ++ G+WR++ES   VL C++ +AC GG    +G C  GY+G YC+ CS+GYS   GFVC+KC +    G V++ +  +   I L     Y+  G       C    R+  Y    S++IVI  WQI++QF+ + N TYPD+YE F+ ++    F+L W + +SC +D DFH +L V T+ P+      A TY  +        D       +H S +LL++F+V+S VS+ LF+ F+CE L D + +LR+DY I+C S KHK  Q Y+VFM+++Y +GIPA Y+ +++++R     D             + LW  Y   A Y+E+IE  RRV++ GV+VFIYP++A Q+AVTL+ A  F+V+S  +NPY       ++ +GH++VF ++++ LL KV++SDE+  SQ  F  V+V VH L+  +I +E
Sbjct: 1146 CTEVMEHATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTLGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVE 1595          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10161.336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRV1_ECTSI5.320e-10538.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JY65_9PHAE3.800e-10440.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0E9_9PHAE4.230e-10338.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FHH1_ECTSI1.180e-10039.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G301_ECTSI2.450e-9940.18Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G5Y7_ECTSI6.620e-9939.96Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2Z8_ECTSI2.410e-9839.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2X5_ECTSI3.010e-9737.92Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5K7Z1_9PHAE7.580e-9637.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTI5_ECTSI2.910e-9438.00Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10161contigM-pyrifera_M_contig10161:6766..8151 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score341.7
Seed ortholog evalue5.5e-91
Seed eggNOG ortholog2880.D8LHQ8
Hectar predicted targeting categoryother localisation
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1386
Cds size1386
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815514.7081113-CDS-M-pyrifera_M_contig10161:6765..81511622815514.7081113-CDS-M-pyrifera_M_contig10161:6765..8151Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10161 6766..8151 +
1692277445.6717312-CDS-M-pyrifera_M_contig10161:6765..81511692277445.6717312-CDS-M-pyrifera_M_contig10161:6765..8151Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10161 6766..8151 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10161.336.1prot_M-pyrifera_M_contig10161.336.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10161 6766..8151 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10161.336.1

>prot_M-pyrifera_M_contig10161.336.1 ID=prot_M-pyrifera_M_contig10161.336.1|Name=mRNA_M-pyrifera_M_contig10161.336.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=462bp
CFNVPENTQSGGGVSTIKDIEVNPGFWRSSESGSIVLQCHNEDACTGGTD
TGSCDAGYDGVYCATCSDGYSMSPGFVCTKCGDWGNVVISLFILCVLIFL
TGCVVYLVRGLPYCQGNRRMNLYSLRIVIVVWQIVSQFSLVTNTTYPDIY
ERFIDIVGSIGFNLDWIMGLSCDLDTDFHSKLFVVTVCPMLLSFLAAVTY
LFSDKSSDSFRRHVSFLLLVSFYVFSPVSTTLFQMFSCETLEDGREFLRA
DYSIQCTSDKHKALQGYSVFMLIMYVIGIPAAYSVIIYKNRLSFDDDNVA
SSLWNSYRPGARYFEIIELLRRVMMTGVIVFIYPDSAPQVAVTLIFAVVF
IVISMTINPYAEKSSNVLSTVGHLIVFFTVYISLLYKVDLSDENSDSQDA
FAYVIVIVHLLLFFSIFIELWCSIRGVKELLDPCPCESSGSSENVGMDEV
LEGQKFSRCAE*
back to top

mRNA from alignment at M-pyrifera_M_contig10161:6766..8151+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10161.336.1 ID=mRNA_M-pyrifera_M_contig10161.336.1|Name=mRNA_M-pyrifera_M_contig10161.336.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1386bp|location=Sequence derived from alignment at M-pyrifera_M_contig10161:6766..8151+ (Macrocystis pyrifera P11B4 male)
TGTTTCAACGTCCCAGAGAACACACAGAGTGGAGGTGGTGTATCTACGAT TAAGGACATTGAGGTGAATCCTGGATTTTGGAGGTCAAGTGAATCAGGTT CCATAGTTTTACAGTGTCACAACGAAGATGCGTGCACAGGGGGTACTGAT ACCGGTTCGTGTGATGCTGGGTATGATGGAGTATATTGCGCTACTTGTTC TGACGGTTACAGCATGTCGCCTGGATTCGTGTGCACGAAGTGTGGTGACT GGGGTAATGTTGTCATTTCTTTGTTCATTCTCTGCGTATTGATATTTTTG ACAGGATGTGTTGTGTATCTTGTGAGAGGTCTTCCCTATTGTCAAGGAAA CAGACGTATGAATCTATACTCTCTAAGAATAGTCATCGTTGTATGGCAGA TTGTGTCACAATTCAGTTTGGTGACAAATACAACGTATCCGGACATTTAT GAGAGGTTTATAGACATAGTAGGTTCTATTGGGTTCAATTTGGACTGGAT AATGGGATTAAGTTGTGACTTAGACACCGATTTCCACTCCAAGTTGTTCG TGGTGACTGTGTGTCCTATGTTACTTTCTTTTTTAGCAGCTGTTACTTAT TTGTTTTCGGATAAGAGTAGTGATTCGTTTCGCAGGCATGTGTCGTTTTT ACTCTTAGTCTCTTTTTACGTATTCTCCCCTGTGTCAACGACATTGTTTC AAATGTTTTCTTGTGAGACACTGGAGGACGGTAGAGAGTTTTTGAGGGCT GATTATTCTATCCAGTGTACCAGCGACAAACATAAAGCCCTACAGGGGTA TTCTGTTTTCATGTTGATCATGTACGTCATTGGTATACCTGCGGCATATT CGGTAATTATATACAAGAACAGGTTGAGTTTTGACGACGATAATGTTGCC TCTTCGTTGTGGAATTCTTATCGCCCAGGCGCCCGTTATTTTGAGATTAT CGAATTGTTGCGTCGTGTCATGATGACTGGTGTAATTGTATTCATATATC CCGACTCGGCCCCCCAGGTAGCTGTTACATTAATATTTGCAGTTGTGTTT ATAGTTATTTCTATGACTATTAACCCTTATGCTGAGAAGAGTTCGAATGT CCTATCGACTGTAGGTCATCTTATTGTTTTCTTTACGGTCTACATTTCTT TATTGTACAAGGTTGACTTGTCCGATGAGAATTCCGACAGTCAGGATGCT TTTGCATATGTTATTGTCATTGTACACCTGCTGTTGTTTTTTAGCATATT TATTGAACTGTGGTGTTCCATTAGGGGAGTCAAAGAGTTATTAGATCCAT GTCCATGCGAGAGTTCGGGGAGTAGTGAAAATGTTGGTATGGACGAGGTT CTAGAAGGTCAGAAATTTAGTCGTTGCGCGGAATAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig10161:6766..8151+

>mRNA_M-pyrifera_M_contig10161.336.1 ID=mRNA_M-pyrifera_M_contig10161.336.1|Name=mRNA_M-pyrifera_M_contig10161.336.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2772bp|location=Sequence derived from alignment at M-pyrifera_M_contig10161:6766..8151+ (Macrocystis pyrifera P11B4 male)
TGTTTCAACGTCCCAGAGAACACACAGAGTGGAGGTGGTGTATCTACGAT
TAAGGACATTGAGGTGAATCCTGGATTTTGGAGGTCAAGTGAATCAGGTT
CCATAGTTTTACAGTGTCACAACGAAGATGCGTGCACAGGGGGTACTGAT
ACCGGTTCGTGTGATGCTGGGTATGATGGAGTATATTGCGCTACTTGTTC
TGACGGTTACAGCATGTCGCCTGGATTCGTGTGCACGAAGTGTGGTGACT
GGGGTAATGTTGTCATTTCTTTGTTCATTCTCTGCGTATTGATATTTTTG
ACAGGATGTGTTGTGTATCTTGTGAGAGGTCTTCCCTATTGTCAAGGAAA
CAGACGTATGAATCTATACTCTCTAAGAATAGTCATCGTTGTATGGCAGA
TTGTGTCACAATTCAGTTTGGTGACAAATACAACGTATCCGGACATTTAT
GAGAGGTTTATAGACATAGTAGGTTCTATTGGGTTCAATTTGGACTGGAT
AATGGGATTAAGTTGTGACTTAGACACCGATTTCCACTCCAAGTTGTTCG
TGGTGACTGTGTGTCCTATGTTACTTTCTTTTTTAGCAGCTGTTACTTAT
TTGTTTTCGGATAAGAGTAGTGATTCGTTTCGCAGGCATGTGTCGTTTTT
ACTCTTAGTCTCTTTTTACGTATTCTCCCCTGTGTCAACGACATTGTTTC
AAATGTTTTCTTGTGAGACACTGGAGGACGGTAGAGAGTTTTTGAGGGCT
GATTATTCTATCCAGTGTACCAGCGACAAACATAAAGCCCTACAGGGGTA
TTCTGTTTTCATGTTGATCATGTACGTCATTGGTATACCTGCGGCATATT
CGGTAATTATATACAAGAACAGGTTGAGTTTTGACGACGATAATGTTGCC
TCTTCGTTGTGGAATTCTTATCGCCCAGGCGCCCGTTATTTTGAGATTAT
CGAATTGTTGCGTCGTGTCATGATGACTGGTGTAATTGTATTCATATATC
CCGACTCGGCCCCCCAGGTAGCTGTTACATTAATATTTGCAGTTGTGTTT
ATAGTTATTTCTATGACTATTAACCCTTATGCTGAGAAGAGTTCGAATGT
CCTATCGACTGTAGGTCATCTTATTGTTTTCTTTACGGTCTACATTTCTT
TATTGTACAAGGTTGACTTGTCCGATGAGAATTCCGACAGTCAGGATGCT
TTTGCATATGTTATTGTCATTGTACACCTGCTGTTGTTTTTTAGCATATT
TATTGAACTGTGGTGTTCCATTAGGGGAGTCAAAGAGTTATTAGATCCAT
GTCCATGCGAGAGTTCGGGGAGTAGTGAAAATGTTGGTATGGACGAGGTT
CTAGAAGGTCAGAAATTTAGTCGTTGCGCGGAATAATGTTTCAACGTCCC
AGAGAACACACAGAGTGGAGGTGGTGTATCTACGATTAAGGACATTGAGG
TGAATCCTGGATTTTGGAGGTCAAGTGAATCAGGTTCCATAGTTTTACAG
TGTCACAACGAAGATGCGTGCACAGGGGGTACTGATACCGGTTCGTGTGA
TGCTGGGTATGATGGAGTATATTGCGCTACTTGTTCTGACGGTTACAGCA
TGTCGCCTGGATTCGTGTGCACGAAGTGTGGTGACTGGGGTAATGTTGTC
ATTTCTTTGTTCATTCTCTGCGTATTGATATTTTTGACAGGATGTGTTGT
GTATCTTGTGAGAGGTCTTCCCTATTGTCAAGGAAACAGACGTATGAATC
TATACTCTCTAAGAATAGTCATCGTTGTATGGCAGATTGTGTCACAATTC
AGTTTGGTGACAAATACAACGTATCCGGACATTTATGAGAGGTTTATAGA
CATAGTAGGTTCTATTGGGTTCAATTTGGACTGGATAATGGGATTAAGTT
GTGACTTAGACACCGATTTCCACTCCAAGTTGTTCGTGGTGACTGTGTGT
CCTATGTTACTTTCTTTTTTAGCAGCTGTTACTTATTTGTTTTCGGATAA
GAGTAGTGATTCGTTTCGCAGGCATGTGTCGTTTTTACTCTTAGTCTCTT
TTTACGTATTCTCCCCTGTGTCAACGACATTGTTTCAAATGTTTTCTTGT
GAGACACTGGAGGACGGTAGAGAGTTTTTGAGGGCTGATTATTCTATCCA
GTGTACCAGCGACAAACATAAAGCCCTACAGGGGTATTCTGTTTTCATGT
TGATCATGTACGTCATTGGTATACCTGCGGCATATTCGGTAATTATATAC
AAGAACAGGTTGAGTTTTGACGACGATAATGTTGCCTCTTCGTTGTGGAA
TTCTTATCGCCCAGGCGCCCGTTATTTTGAGATTATCGAATTGTTGCGTC
GTGTCATGATGACTGGTGTAATTGTATTCATATATCCCGACTCGGCCCCC
CAGGTAGCTGTTACATTAATATTTGCAGTTGTGTTTATAGTTATTTCTAT
GACTATTAACCCTTATGCTGAGAAGAGTTCGAATGTCCTATCGACTGTAG
GTCATCTTATTGTTTTCTTTACGGTCTACATTTCTTTATTGTACAAGGTT
GACTTGTCCGATGAGAATTCCGACAGTCAGGATGCTTTTGCATATGTTAT
TGTCATTGTACACCTGCTGTTGTTTTTTAGCATATTTATTGAACTGTGGT
GTTCCATTAGGGGAGTCAAAGAGTTATTAGATCCATGTCCATGCGAGAGT
TCGGGGAGTAGTGAAAATGTTGGTATGGACGAGGTTCTAGAAGGTCAGAA
ATTTAGTCGTTGCGCGGAATAA
back to top