mRNA_M-pyrifera_M_contig101589.332.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101589.332.1
Unique NamemRNA_M-pyrifera_M_contig101589.332.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig101589.332.1 vs. uniprot
Match: A0A7V3JL39_9BACT (Holo-[acyl-carrier-protein] synthase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V3JL39_9BACT)

HSP 1 Score: 192 bits (488), Expect = 5.700e-61
Identity = 90/123 (73.17%), Postives = 106/123 (86.18%), Query Frame = 1
Query:    7 IIGIGTDITECLRIAQMIERHAELFINRVFTPQETQFCQSRKHATQHFAGRWAAKEAVLKALGTGWRRGIRWRDVEVISEGKGAPTVELHGEALSVAKQLGVDRVMLSIAHCRSHATAYAIAV 375
            I+G+G DITECLRIA+MIERHA+LFINRV+TP E  +CQ RK ATQHFAGRWAAKEAVLKALGTGWR+GI WRDVEV +E  G PT+ LHG A   A+QLG D+V++SI+HCR+HATAYA+AV
Sbjct:    3 ILGVGVDITECLRIAKMIERHADLFINRVYTPGEIAYCQRRKQATQHFAGRWAAKEAVLKALGTGWRQGISWRDVEVCNEAGGRPTIVLHGGAKRAAEQLGADQVLISISHCRTHATAYALAV 125          
BLAST of mRNA_M-pyrifera_M_contig101589.332.1 vs. uniprot
Match: A0A832C656_9BACT (Holo-[acyl-carrier-protein] synthase n=1 Tax=Planctomycetales bacterium TaxID=2053591 RepID=A0A832C656_9BACT)

HSP 1 Score: 184 bits (466), Expect = 1.160e-57
Identity = 85/124 (68.55%), Postives = 103/124 (83.06%), Query Frame = 1
Query:    4 RIIGIGTDITECLRIAQMIERHAELFINRVFTPQETQFCQSRKHATQHFAGRWAAKEAVLKALGTGWRRGIRWRDVEVISEGKGAPTVELHGEALSVAKQLGVDRVMLSIAHCRSHATAYAIAV 375
            RI+GIGTDI ECLRIAQMI+RH ELF+NRV+TP E ++CQSRK ATQHFAGRWAAKEA+LKALGTGWRRGI WRD+EV ++  G P V L G    + +QLGV  +++SI+HCRSHA AYA+A+
Sbjct:    2 RIVGIGTDIVECLRIAQMIDRHGELFVNRVYTPAEIRYCQSRKQATQHFAGRWAAKEAILKALGTGWRRGISWRDMEVRNDELGRPQVALRGAVRDLVEQLGVKEILVSISHCRSHAMAYALAL 125          
BLAST of mRNA_M-pyrifera_M_contig101589.332.1 vs. uniprot
Match: A0A518ATD6_9BACT (Holo-[acyl-carrier-protein] synthase n=1 Tax=Aeoliella mucimassa TaxID=2527972 RepID=A0A518ATD6_9BACT)

HSP 1 Score: 183 bits (465), Expect = 1.320e-57
Identity = 89/125 (71.20%), Postives = 102/125 (81.60%), Query Frame = 1
Query:    7 IIGIGTDITECLRIAQMIERHAELFINRVFTPQETQFCQSRKHATQHFAGRWAAKEAVLKALGTGWRRGIRWRDVEVISEGKGAPTVELHGEALSVAKQLGVDRVMLSIAHCRSHATAYAIAVAE 381
            IIGIGTDITECLRIA MIERH ELFI RV+TPQE ++C +RK ATQH+AGRWAAKEAVLKA+GTGW+RGI WRDVEV++   GAPT+ELH  A  VA   G+ RV +SI+H RSHA AYAIA  E
Sbjct:    3 IIGIGTDITECLRIANMIERHGELFICRVYTPQEIEYCSTRKAATQHYAGRWAAKEAVLKAIGTGWQRGISWRDVEVVNLSSGAPTIELHAGAREVADSQGIARVHISISHARSHAIAYAIAEGE 127          
BLAST of mRNA_M-pyrifera_M_contig101589.332.1 vs. uniprot
Match: A0A3L7RYT4_9BACT (Holo-[acyl-carrier-protein] synthase n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7RYT4_9BACT)

HSP 1 Score: 184 bits (466), Expect = 1.500e-57
Identity = 86/123 (69.92%), Postives = 103/123 (83.74%), Query Frame = 1
Query:    7 IIGIGTDITECLRIAQMIERHAELFINRVFTPQETQFCQSRKHATQHFAGRWAAKEAVLKALGTGWRRGIRWRDVEVISEGKGAPTVELHGEALSVAKQLGVDRVMLSIAHCRSHATAYAIAV 375
            ++GIGTDITECLRIAQMIERH ELF+ RV+TP E ++C+SRK ATQHFAGRWAAKEA+LKALGTGWRRGI WRD+EVI+   G P   L G A  VA+ LG+  V++SI+HCRSHATAYA+A+
Sbjct:    3 VLGIGTDITECLRIAQMIERHGELFVGRVYTPAEIEYCRSRKQATQHFAGRWAAKEAILKALGTGWRRGISWRDIEVINAPGGRPRATLFGGAADVAEHLGIACVLVSISHCRSHATAYAMAL 125          
BLAST of mRNA_M-pyrifera_M_contig101589.332.1 vs. uniprot
Match: A0A1G2ZZ52_9BACT (Holo-[acyl-carrier-protein] synthase n=1 Tax=Planctomycetes bacterium RBG_16_64_10 TaxID=1801970 RepID=A0A1G2ZZ52_9BACT)

HSP 1 Score: 183 bits (464), Expect = 2.500e-57
Identity = 84/126 (66.67%), Postives = 105/126 (83.33%), Query Frame = 1
Query:    7 IIGIGTDITECLRIAQMIERHAELFINRVFTPQETQFCQSRKHATQHFAGRWAAKEAVLKALGTGWRRGIRWRDVEVISEGKGAPTVELHGEALSVAKQLGVDRVMLSIAHCRSHATAYAIAVAEK 384
            ++GIGTDI ECLRIAQ+IERH ELFINRVFT  E ++C+SRK ATQHFAGRWAAKEAVLKA+GTGWRRGIRWRDVEV + G G P + L G   ++ +Q G+  +++SI+HCRSHATA+A+AV ++
Sbjct:    3 VLGIGTDIVECLRIAQIIERHGELFINRVFTDHEIRYCRSRKAATQHFAGRWAAKEAVLKAMGTGWRRGIRWRDVEVRNAGSGRPVIALRGGVRTLVEQSGIREMLISISHCRSHATAFAVAVGDE 128          
BLAST of mRNA_M-pyrifera_M_contig101589.332.1 vs. uniprot
Match: A0A3L7UA15_9BACT (Holo-[acyl-carrier-protein] synthase n=3 Tax=Planctomycetes TaxID=203682 RepID=A0A3L7UA15_9BACT)

HSP 1 Score: 182 bits (462), Expect = 5.550e-57
Identity = 85/125 (68.00%), Postives = 103/125 (82.40%), Query Frame = 1
Query:    7 IIGIGTDITECLRIAQMIERHAELFINRVFTPQETQFCQSRKHATQHFAGRWAAKEAVLKALGTGWRRGIRWRDVEVISEGKGAPTVELHGEALSVAKQLGVDRVMLSIAHCRSHATAYAIAVAE 381
            ++GIGTDITECLRIAQMIERH ELF+ RV+TP E ++C+SR+ ATQHFAGRWAAKEAVLKALGTGWRRGI WRD+EV +   G P   L G    VAK +G++ V++SI+HCRSHATAYA+A+ E
Sbjct:    3 VLGIGTDITECLRIAQMIERHGELFVGRVYTPLEIEYCRSRRMATQHFAGRWAAKEAVLKALGTGWRRGISWRDIEVRNAAGGRPQAFLKGGTQEVAKAMGIECVLISISHCRSHATAYAVAIDE 127          
BLAST of mRNA_M-pyrifera_M_contig101589.332.1 vs. uniprot
Match: A0A257UFS7_9BACT (Holo-[acyl-carrier-protein] synthase n=1 Tax=Planctomycetia bacterium 21-64-5 TaxID=1970542 RepID=A0A257UFS7_9BACT)

HSP 1 Score: 181 bits (460), Expect = 9.840e-57
Identity = 84/124 (67.74%), Postives = 102/124 (82.26%), Query Frame = 1
Query:    4 RIIGIGTDITECLRIAQMIERHAELFINRVFTPQETQFCQSRKHATQHFAGRWAAKEAVLKALGTGWRRGIRWRDVEVISEGKGAPTVELHGEALSVAKQLGVDRVMLSIAHCRSHATAYAIAV 375
            R+IGIGTDI ECLRIAQMIERH ELFINRV+TP E ++C SRK ATQHFAGRWAAKEA+LKALGTGWR+GI WRD+E+ ++  G P V L G A  + +QLG+  + +SI+HCRSHA AYA+A+
Sbjct:    2 RVIGIGTDIIECLRIAQMIERHGELFINRVYTPLEIRYCNSRKQATQHFAGRWAAKEAILKALGTGWRKGISWRDIEIRNDPLGKPVVGLRGGAADLVEQLGITEMQVSISHCRSHALAYALAL 125          
BLAST of mRNA_M-pyrifera_M_contig101589.332.1 vs. uniprot
Match: A0A1G2ZDC8_9BACT (Holo-[acyl-carrier-protein] synthase n=1 Tax=Planctomycetes bacterium RBG_13_63_9 TaxID=1801965 RepID=A0A1G2ZDC8_9BACT)

HSP 1 Score: 180 bits (456), Expect = 3.410e-56
Identity = 84/126 (66.67%), Postives = 104/126 (82.54%), Query Frame = 1
Query:    7 IIGIGTDITECLRIAQMIERHAELFINRVFTPQETQFCQSRKHATQHFAGRWAAKEAVLKALGTGWRRGIRWRDVEVISEGKGAPTVELHGEALSVAKQLGVDRVMLSIAHCRSHATAYAIAVAEK 384
            IIGIGTDI ECLRIA+MIERH ELFINRV+TP+E ++CQ+R  ATQHF GRWAAKEAV KALGTGWR+GI WRD+EV ++  G PT  L G A  VA QLG+ ++++SI+H R+HA A+A+A+AEK
Sbjct:    4 IIGIGTDIAECLRIARMIERHGELFINRVYTPEEIEYCQARAQATQHFTGRWAAKEAVFKALGTGWRQGITWRDIEVRNQASGKPTALLRGGAKEVAVQLGITKLLVSISHSRTHAIAFAVALAEK 129          
BLAST of mRNA_M-pyrifera_M_contig101589.332.1 vs. uniprot
Match: A0A3L7NL76_9BACT (Holo-[acyl-carrier-protein] synthase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7NL76_9BACT)

HSP 1 Score: 179 bits (455), Expect = 6.460e-56
Identity = 84/125 (67.20%), Postives = 103/125 (82.40%), Query Frame = 1
Query:    7 IIGIGTDITECLRIAQMIERHAELFINRVFTPQETQFCQSRKHATQHFAGRWAAKEAVLKALGTGWRRGIRWRDVEVISEGKGAPTVELHGEALSVAKQLGVDRVMLSIAHCRSHATAYAIAVAE 381
            ++G+GTDITECLRIAQMIERH ELF+ RV+TP E ++C+SRK ATQHFAGRWAAKEAVLKALGTGWRRGI WRD+E+ +   G P   L G A  VA++LG+  V++SI+HCRSHATAY +A+ E
Sbjct:    3 VLGVGTDITECLRIAQMIERHGELFVGRVYTPVEIEYCRSRKMATQHFAGRWAAKEAVLKALGTGWRRGISWRDIEIRNAPGGRPQAALSGGAAEVAEKLGIRCVLVSISHCRSHATAYCMALDE 127          
BLAST of mRNA_M-pyrifera_M_contig101589.332.1 vs. uniprot
Match: A0A7V4M7J2_9BACT (Holo-[acyl-carrier-protein] synthase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V4M7J2_9BACT)

HSP 1 Score: 179 bits (454), Expect = 7.330e-56
Identity = 80/125 (64.00%), Postives = 105/125 (84.00%), Query Frame = 1
Query:    7 IIGIGTDITECLRIAQMIERHAELFINRVFTPQETQFCQSRKHATQHFAGRWAAKEAVLKALGTGWRRGIRWRDVEVISEGKGAPTVELHGEALSVAKQLGVDRVMLSIAHCRSHATAYAIAVAE 381
            ++GIGTDITECLRIAQMIERH ELF++RV+TP+E ++C+ RK ATQHF GRWAAKEAVLKA+GTGWR+GI WRD+E+ +E  G PT+ L G A   A+Q G+  V++SI+HCR+HATA+A+A+ +
Sbjct:    3 VLGIGTDITECLRIAQMIERHGELFVDRVYTPEEIRYCRQRKQATQHFTGRWAAKEAVLKAIGTGWRQGISWRDIEIQNEPGGRPTICLRGGAKEAAQQRGIAEVLVSISHCRTHATAFAVALGK 127          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101589.332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V3JL39_9BACT5.700e-6173.17Holo-[acyl-carrier-protein] synthase n=1 Tax=Planc... [more]
A0A832C656_9BACT1.160e-5768.55Holo-[acyl-carrier-protein] synthase n=1 Tax=Planc... [more]
A0A518ATD6_9BACT1.320e-5771.20Holo-[acyl-carrier-protein] synthase n=1 Tax=Aeoli... [more]
A0A3L7RYT4_9BACT1.500e-5769.92Holo-[acyl-carrier-protein] synthase n=2 Tax=Planc... [more]
A0A1G2ZZ52_9BACT2.500e-5766.67Holo-[acyl-carrier-protein] synthase n=1 Tax=Planc... [more]
A0A3L7UA15_9BACT5.550e-5768.00Holo-[acyl-carrier-protein] synthase n=3 Tax=Planc... [more]
A0A257UFS7_9BACT9.840e-5767.74Holo-[acyl-carrier-protein] synthase n=1 Tax=Planc... [more]
A0A1G2ZDC8_9BACT3.410e-5666.67Holo-[acyl-carrier-protein] synthase n=1 Tax=Planc... [more]
A0A3L7NL76_9BACT6.460e-5667.20Holo-[acyl-carrier-protein] synthase n=1 Tax=Planc... [more]
A0A7V4M7J2_9BACT7.330e-5664.00Holo-[acyl-carrier-protein] synthase n=1 Tax=Planc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101589contigM-pyrifera_M_contig101589:2..388 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score173.7
Seed ortholog evalue5.5e-41
Seed eggNOG ortholog314230.DSM3645_01716
Preferred nameacpS
KEGG rclassRC00002,RC00833
KEGG koko:K00997,ko:K06925,ko:K18014
KEGG ReactionR01625,R03030
KEGG Pathwayko00310,ko00770,map00310,map00770
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
EggNOG OGs2IZSD@203682,COG0736@1,COG0736@2
EC2.7.8.7,4.3.1.14
COG Functional cat.I
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03016
Exons1
Model size387
Cds size387
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815514.5471683-CDS-M-pyrifera_M_contig101589:1..3881622815514.5471683-CDS-M-pyrifera_M_contig101589:1..388Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101589 2..388 +
1692277445.589836-CDS-M-pyrifera_M_contig101589:1..3881692277445.589836-CDS-M-pyrifera_M_contig101589:1..388Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101589 2..388 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101589.332.1prot_M-pyrifera_M_contig101589.332.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101589 2..388 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101589.332.1

>prot_M-pyrifera_M_contig101589.332.1 ID=prot_M-pyrifera_M_contig101589.332.1|Name=mRNA_M-pyrifera_M_contig101589.332.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp
QRIIGIGTDITECLRIAQMIERHAELFINRVFTPQETQFCQSRKHATQHF
AGRWAAKEAVLKALGTGWRRGIRWRDVEVISEGKGAPTVELHGEALSVAK
QLGVDRVMLSIAHCRSHATAYAIAVAEK*
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mRNA from alignment at M-pyrifera_M_contig101589:2..388+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101589.332.1 ID=mRNA_M-pyrifera_M_contig101589.332.1|Name=mRNA_M-pyrifera_M_contig101589.332.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig101589:2..388+ (Macrocystis pyrifera P11B4 male)
CAACGCATCATCGGAATCGGAACCGACATCACCGAGTGTTTGCGAATCGC GCAGATGATTGAGCGGCATGCGGAGCTATTTATCAACCGGGTATTCACCC CCCAGGAAACTCAATTCTGCCAAAGCCGGAAGCACGCCACACAGCACTTT GCCGGAAGATGGGCCGCCAAGGAAGCCGTACTCAAAGCACTCGGTACAGG GTGGCGGCGGGGGATTCGCTGGCGCGATGTTGAAGTAATCAGCGAAGGGA AGGGGGCCCCAACCGTGGAACTTCACGGGGAGGCTCTGAGTGTAGCCAAG CAATTGGGCGTCGACCGTGTGATGCTCAGCATTGCACACTGTAGAAGTCA CGCCACGGCGTACGCCATTGCAGTGGCGGAGAAATAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101589:2..388+

>mRNA_M-pyrifera_M_contig101589.332.1 ID=mRNA_M-pyrifera_M_contig101589.332.1|Name=mRNA_M-pyrifera_M_contig101589.332.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig101589:2..388+ (Macrocystis pyrifera P11B4 male)
CAACGCATCATCGGAATCGGAACCGACATCACCGAGTGTTTGCGAATCGC
GCAGATGATTGAGCGGCATGCGGAGCTATTTATCAACCGGGTATTCACCC
CCCAGGAAACTCAATTCTGCCAAAGCCGGAAGCACGCCACACAGCACTTT
GCCGGAAGATGGGCCGCCAAGGAAGCCGTACTCAAAGCACTCGGTACAGG
GTGGCGGCGGGGGATTCGCTGGCGCGATGTTGAAGTAATCAGCGAAGGGA
AGGGGGCCCCAACCGTGGAACTTCACGGGGAGGCTCTGAGTGTAGCCAAG
CAATTGGGCGTCGACCGTGTGATGCTCAGCATTGCACACTGTAGAAGTCA
CGCCACGGCGTACGCCATTGCAGTGGCGGAGAAATAGCAACGCATCATCG
GAATCGGAACCGACATCACCGAGTGTTTGCGAATCGCGCAGATGATTGAG
CGGCATGCGGAGCTATTTATCAACCGGGTATTCACCCCCCAGGAAACTCA
ATTCTGCCAAAGCCGGAAGCACGCCACACAGCACTTTGCCGGAAGATGGG
CCGCCAAGGAAGCCGTACTCAAAGCACTCGGTACAGGGTGGCGGCGGGGG
ATTCGCTGGCGCGATGTTGAAGTAATCAGCGAAGGGAAGGGGGCCCCAAC
CGTGGAACTTCACGGGGAGGCTCTGAGTGTAGCCAAGCAATTGGGCGTCG
ACCGTGTGATGCTCAGCATTGCACACTGTAGAAGTCACGCCACGGCGTAC
GCCATTGCAGTGGCGGAGAAATAG
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