mRNA_M-pyrifera_M_contig101585.330.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101585.330.1 vs. uniprot
Match: A0A5A8AYT8_9PLAN (Type-4 uracil-DNA glycosylase n=6 Tax=Gimesia TaxID=1649453 RepID=A0A5A8AYT8_9PLAN) HSP 1 Score: 338 bits (867), Expect = 1.020e-115 Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 1 Query: 1 GVGNPSAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNPSDQEAANCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHSELPIGKMRGQFYEYGRARVVCTYHPSYLLRNPSAKKNVWEDMILLFKDMGIDLKTTQN 483 GVGNPSAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNPSDQEAANCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHSELPIGKMRGQFYEYGRARVVCTYHPSYLLRNPSAKKNVWEDMILLFKDMGIDLK TQN Sbjct: 140 GVGNPSAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNPSDQEAANCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHSELPIGKMRGQFYEYGRARVVCTYHPSYLLRNPSAKKNVWEDMILLFKDMGIDLKATQN 300
BLAST of mRNA_M-pyrifera_M_contig101585.330.1 vs. uniprot
Match: UPI001E4FF441 (uracil-DNA glycosylase n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=UPI001E4FF441) HSP 1 Score: 328 bits (841), Expect = 3.370e-113 Identity = 152/161 (94.41%), Postives = 158/161 (98.14%), Query Frame = 1 Query: 1 GVGNPSAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNPSDQEAANCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHSELPIGKMRGQFYEYGRARVVCTYHPSYLLRNPSAKKNVWEDMILLFKDMGIDLKTTQN 483 GVGNP AKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNP+DQEAANCRGFLD+QIEIVDPDYIVCWGSVAAKNLLHSE+PIGKMRGQFYEYGRA+VVCTYHPSYLLRNPSAKKNVW+DMI LF+DMGIDLK TQN Sbjct: 44 GVGNPKAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNPTDQEAANCRGFLDSQIEIVDPDYIVCWGSVAAKNLLHSEMPIGKMRGQFYEYGRAKVVCTYHPSYLLRNPSAKKNVWDDMIFLFQDMGIDLKATQN 204
BLAST of mRNA_M-pyrifera_M_contig101585.330.1 vs. uniprot
Match: A0A518A8E7_9PLAN (Type-4 uracil-DNA glycosylase n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A8E7_9PLAN) HSP 1 Score: 328 bits (841), Expect = 8.350e-112 Identity = 152/161 (94.41%), Postives = 158/161 (98.14%), Query Frame = 1 Query: 1 GVGNPSAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNPSDQEAANCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHSELPIGKMRGQFYEYGRARVVCTYHPSYLLRNPSAKKNVWEDMILLFKDMGIDLKTTQN 483 GVGNP AKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNP+DQEAANCRGFLD+QIEIVDPDYIVCWGSVAAKNLLHSE+PIGKMRGQFYEYGRA+VVCTYHPSYLLRNPSAKKNVW+DMI LF+DMGIDLK TQN Sbjct: 137 GVGNPKAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNPTDQEAANCRGFLDSQIEIVDPDYIVCWGSVAAKNLLHSEMPIGKMRGQFYEYGRAKVVCTYHPSYLLRNPSAKKNVWDDMIFLFQDMGIDLKATQN 297
BLAST of mRNA_M-pyrifera_M_contig101585.330.1 vs. uniprot
Match: A0A517VG47_9PLAN (Type-4 uracil-DNA glycosylase n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VG47_9PLAN) HSP 1 Score: 317 bits (812), Expect = 2.010e-107 Identity = 148/158 (93.67%), Postives = 153/158 (96.84%), Query Frame = 1 Query: 1 GVGNPSAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNPSDQEAANCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHSELPIGKMRGQFYEYGRARVVCTYHPSYLLRNPSAKKNVWEDMILLFKDMGIDLKT 474 GVGNP AKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQ+KRS+IYIANILRCRPPGNRNPSD EA+NCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHS+LPIGKMRG FYEYGRA+VVCTYHPSYLLRNPSAKKNVWEDMI LF DMGIDLKT Sbjct: 136 GVGNPRAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQLKRSDIYIANILRCRPPGNRNPSDLEASNCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHSDLPIGKMRGDFYEYGRAKVVCTYHPSYLLRNPSAKKNVWEDMIYLFADMGIDLKT 293
BLAST of mRNA_M-pyrifera_M_contig101585.330.1 vs. uniprot
Match: A0A517VVK7_9PLAN (Type-4 uracil-DNA glycosylase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VVK7_9PLAN) HSP 1 Score: 314 bits (805), Expect = 2.500e-106 Identity = 147/157 (93.63%), Postives = 154/157 (98.09%), Query Frame = 1 Query: 1 GVGNPSAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNPSDQEAANCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHSELPIGKMRGQFYEYGRARVVCTYHPSYLLRNPSAKKNVWEDMILLFKDMGIDLK 471 GVGNP+AKIMFIGEAPGADED+QGEPFVGRAGKLLDKIIEACQ+KRS+IYIANILRCRPPGNRNPSD EAANCRGFLDAQIEIVDPDYIVCWGSVAAKNLL SELPIGKMRG+FYEYGRARVVCTYHPSYLLRNPSAKKNVW+DMI LF+DMGIDLK Sbjct: 138 GVGNPAAKIMFIGEAPGADEDRQGEPFVGRAGKLLDKIIEACQLKRSDIYIANILRCRPPGNRNPSDTEAANCRGFLDAQIEIVDPDYIVCWGSVAAKNLLRSELPIGKMRGRFYEYGRARVVCTYHPSYLLRNPSAKKNVWDDMIDLFQDMGIDLK 294
BLAST of mRNA_M-pyrifera_M_contig101585.330.1 vs. uniprot
Match: A0A518IEF9_9PLAN (Type-4 uracil-DNA glycosylase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IEF9_9PLAN) HSP 1 Score: 314 bits (805), Expect = 2.960e-106 Identity = 145/157 (92.36%), Postives = 153/157 (97.45%), Query Frame = 1 Query: 1 GVGNPSAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNPSDQEAANCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHSELPIGKMRGQFYEYGRARVVCTYHPSYLLRNPSAKKNVWEDMILLFKDMGIDLK 471 GVGNP AKIMFIGEAPGADEDKQGEPFVGRAGKL+DKIIEACQ+KRS+IYIANILRCRPPGNRNP+++EA NCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHSELPIGKMRGQFYEYGRARVVCTYHPSYLLRNPSAKKNVW+DMI LF DMG+DLK Sbjct: 143 GVGNPKAKIMFIGEAPGADEDKQGEPFVGRAGKLMDKIIEACQIKRSDIYIANILRCRPPGNRNPTNEEADNCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHSELPIGKMRGQFYEYGRARVVCTYHPSYLLRNPSAKKNVWDDMIYLFADMGVDLK 299
BLAST of mRNA_M-pyrifera_M_contig101585.330.1 vs. uniprot
Match: A0A355G9B0_9PLAN (Type-4 uracil-DNA glycosylase n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355G9B0_9PLAN) HSP 1 Score: 314 bits (804), Expect = 3.100e-106 Identity = 146/157 (92.99%), Postives = 152/157 (96.82%), Query Frame = 1 Query: 1 GVGNPSAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNPSDQEAANCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHSELPIGKMRGQFYEYGRARVVCTYHPSYLLRNPSAKKNVWEDMILLFKDMGIDLK 471 GVGNP AKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRS+IYIANILRCRPPGNRNP+D EA+NCRG+LDAQIEIVDPDYIVCWGSVAAKNLLHS+LPIGKMRG FYEYGRA+VVCTYHPSYLLRNPSAKKNVWEDMI LF DMGIDLK Sbjct: 134 GVGNPRAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSDIYIANILRCRPPGNRNPTDLEASNCRGYLDAQIEIVDPDYIVCWGSVAAKNLLHSDLPIGKMRGDFYEYGRAKVVCTYHPSYLLRNPSAKKNVWEDMIYLFADMGIDLK 290
BLAST of mRNA_M-pyrifera_M_contig101585.330.1 vs. uniprot
Match: A6C3D4_9PLAN (Type-4 uracil-DNA glycosylase n=5 Tax=Planctomycetaceae TaxID=126 RepID=A6C3D4_9PLAN) HSP 1 Score: 312 bits (799), Expect = 1.910e-105 Identity = 145/157 (92.36%), Postives = 152/157 (96.82%), Query Frame = 1 Query: 1 GVGNPSAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNPSDQEAANCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHSELPIGKMRGQFYEYGRARVVCTYHPSYLLRNPSAKKNVWEDMILLFKDMGIDLK 471 GVGNP AKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRS+IYIANILRCRPPGNRNP+D EA+NCRG+LDAQIEIVDPDYIVCWGSVAAKNLLHS+LPIGKMRG FYEYGRA+VVCTYHPSYLLRNPSAKKNVWEDMI LF DMGI+LK Sbjct: 136 GVGNPRAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSDIYIANILRCRPPGNRNPTDLEASNCRGYLDAQIEIVDPDYIVCWGSVAAKNLLHSDLPIGKMRGDFYEYGRAKVVCTYHPSYLLRNPSAKKNVWEDMIYLFADMGINLK 292
BLAST of mRNA_M-pyrifera_M_contig101585.330.1 vs. uniprot
Match: A0A517QYQ0_9BACT (Type-4 uracil-DNA glycosylase n=1 Tax=Planctomycetes bacterium Pan189 TaxID=2527980 RepID=A0A517QYQ0_9BACT) HSP 1 Score: 267 bits (682), Expect = 5.830e-88 Identity = 123/156 (78.85%), Postives = 138/156 (88.46%), Query Frame = 1 Query: 1 GVGNPSAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNPSDQEAANCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHSELPIGKMRGQFYEYGRARVVCTYHPSYLLRNPSAKKNVWEDMILLFKDMGIDL 468 GVG+P A IMFIGEAPGADED++GEPFVGRAG+LL+KII AC+MKR EIYI NILRCRPPGNRNPS+ EAANCR +LDAQI +V PDYIVCWGSVAAK+LL + PIGKMR QF+EYG A+V CTYHPSYLLRNP AKK+VWEDM LFKDMG+DL Sbjct: 117 GVGDPEAAIMFIGEAPGADEDREGEPFVGRAGQLLNKIIGACRMKREEIYICNILRCRPPGNRNPSETEAANCREYLDAQIALVRPDYIVCWGSVAAKSLLGASQPIGKMRRQFFEYGEAKVACTYHPSYLLRNPPAKKDVWEDMKWLFKDMGVDL 272
BLAST of mRNA_M-pyrifera_M_contig101585.330.1 vs. uniprot
Match: A0A517Z374_9PLAN (Type-4 uracil-DNA glycosylase n=2 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z374_9PLAN) HSP 1 Score: 262 bits (669), Expect = 5.210e-87 Identity = 118/155 (76.13%), Postives = 137/155 (88.39%), Query Frame = 1 Query: 1 GVGNPSAKIMFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPPGNRNPSDQEAANCRGFLDAQIEIVDPDYIVCWGSVAAKNLLHSELPIGKMRGQFYEYGRARVVCTYHPSYLLRNPSAKKNVWEDMILLFKDMGID 465 GVGNP A++MF+GEAPGADEDKQGEPFVGRAG+LL+KIIEAC KR +IYI NILRCRPPGNRNPS +EAANCR +LD QI VDPDYIVCWG++AA+NLL + IGK+RG+F EYGRA+V+CTYHPSYLLRNPSAKK VWEDM LL K+MG++ Sbjct: 44 GVGNPQAQVMFVGEAPGADEDKQGEPFVGRAGQLLNKIIEACGWKREDIYICNILRCRPPGNRNPSPKEAANCREYLDGQISTVDPDYIVCWGTIAAQNLLDTTETIGKLRGRFMEYGRAKVLCTYHPSYLLRNPSAKKPVWEDMQLLLKEMGLE 198 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101585.330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101585.330.1 >prot_M-pyrifera_M_contig101585.330.1 ID=prot_M-pyrifera_M_contig101585.330.1|Name=mRNA_M-pyrifera_M_contig101585.330.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp MFIGEAPGADEDKQGEPFVGRAGKLLDKIIEACQMKRSEIYIANILRCRPback to top mRNA from alignment at M-pyrifera_M_contig101585:3..488+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101585.330.1 ID=mRNA_M-pyrifera_M_contig101585.330.1|Name=mRNA_M-pyrifera_M_contig101585.330.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig101585:3..488+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101585:3..488+ >mRNA_M-pyrifera_M_contig101585.330.1 ID=mRNA_M-pyrifera_M_contig101585.330.1|Name=mRNA_M-pyrifera_M_contig101585.330.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig101585:3..488+ (Macrocystis pyrifera P11B4 male)back to top |