Homology
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match:
A0A482RDA3_9ARCH (DNA-directed RNA polymerase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RDA3_9ARCH)
HSP 1 Score: 321 bits (823), Expect = 2.620e-107
Identity = 155/219 (70.78%), Postives = 181/219 (82.65%), Query Frame = 1
Query: 1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
R+D S+ RP E GVVDRVMLTTN GQR VK+RVR+VR+P++GDKFASRHGQKGTVGMLYR+EDMPFT++ +TPDII+NPHA+PSRMTVG LIEC+ K G EGD TPF T +V K L GYQR GNEVMY GHTGRRLE Q+F GPTYYQRLKHMV DK+H+RSRGPT++L RQPMEGR++ GGLRFGEMERDCI+AHGTA+LL+ R+
Sbjct: 58 RRDVSLCSRPAETGVVDRVMLTTNVKGQRMVKLRVRSVRLPQVGDKFASRHGQKGTVGMLYRQEDMPFTQQGMTPDIIVNPHAIPSRMTVGHLIECLFGKVATFVGIEGDGTPF-TDVTVHKLAVRLHALGYQRHGNEVMYNGHTGRRLEAQVFFGPTYYQRLKHMVDDKIHSRSRGPTTMLTRQPMEGRARDGGLRFGEMERDCIIAHGTANLLQERL 275
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match:
A0A7S3SQ47_EMIHU (DNA-directed RNA polymerase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SQ47_EMIHU)
HSP 1 Score: 308 bits (789), Expect = 1.020e-101
Identity = 143/219 (65.30%), Postives = 185/219 (84.47%), Query Frame = 1
Query: 1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
++D+S +R +E G VD+V+LTTN++G++ VKVR+R+VR+P+IGDKFASRHGQKGT+G+ YR+EDMPF E ITPDII+NPHA+PSRMT+G L+EC+LSK + G EGDATPF + +VD K LQ+ GYQ+ G EVMY GHTGRRLE+ IFLGPTYYQRLKHMV DK+H+R+RGP +LL RQPMEGR++ GGLRFGEMERDC+++HG AS+++ R+
Sbjct: 98 KRDASTPLRSSEAGYVDQVLLTTNQEGRKFVKVRIRSVRVPQIGDKFASRHGQKGTIGITYRQEDMPFNCEGITPDIIVNPHAIPSRMTIGHLVECLLSKVSSLTGDEGDATPFASV-TVDDISKLLQNFGYQKRGFEVMYNGHTGRRLESSIFLGPTYYQRLKHMVDDKIHSRARGPVTLLTRQPMEGRARDGGLRFGEMERDCMISHGVASIMKERL 315
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match:
A0A5A8DDD1_CAFRO (DNA-directed RNA polymerase subunit beta n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DDD1_CAFRO)
HSP 1 Score: 326 bits (836), Expect = 2.520e-100
Identity = 156/219 (71.23%), Postives = 184/219 (84.02%), Query Frame = 1
Query: 1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
++ +S+ R TE GVVDRV+L++++DGQR KVRVRN+R P+IGDKFASRHGQKGTVGM +R EDMPFTRE I PDIIMNPHAVPSRMTVG LIEC+L K + +G EGD TPF+ +F+V+ +LQ GYQR+GNEVMY GHTGR++E+QIFLGP YYQRLKHMV DKVHARSRGP LL RQPMEGR K GGLRFGEMERDCI++HGTA+LL+ RM
Sbjct: 955 KRSTSIKARVTEAGVVDRVLLSSDRDGQRFTKVRVRNIRYPQIGDKFASRHGQKGTVGMTFRMEDMPFTREGIVPDIIMNPHAVPSRMTVGHLIECLLGKVMTHHGTEGDGTPFIESFNVETVSGYLQQIGYQRSGNEVMYNGHTGRQMESQIFLGPVYYQRLKHMVDDKVHARSRGPMQLLTRQPMEGRGKDGGLRFGEMERDCIISHGTAALLQERM 1173
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match:
A0A077RC16_9BASI (DNA-directed RNA polymerase n=1 Tax=Melanopsichium pennsylvanicum 4 TaxID=1398559 RepID=A0A077RC16_9BASI)
HSP 1 Score: 305 bits (781), Expect = 3.850e-100
Identity = 138/219 (63.01%), Postives = 179/219 (81.74%), Query Frame = 1
Query: 1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
+KD+S+ ++ TE+G++D+V++TTN G + VKVRVRN R+P+ GDKFASRHGQKGT+G+ YR+EDMPF+ E +TPDII+NPHA+PSRMT+G L+EC+LSK + G EGDATPF T +V+ L+ GYQ G EVMY GHTGR+L+ Q++LGPTYYQRLKHMV DK+H+R+RGP +L RQP+EGRS+GGGLRFGEMERDC++AHG A L+ RM
Sbjct: 126 KKDASISLKSTENGIIDQVLVTTNSHGNKFVKVRVRNTRVPQTGDKFASRHGQKGTIGITYRQEDMPFSAEGVTPDIIINPHAIPSRMTIGHLVECLLSKVAALSGQEGDATPF-TELTVEAVSSILRGLGYQSRGLEVMYHGHTGRKLQAQVYLGPTYYQRLKHMVDDKIHSRARGPVQILTRQPVEGRSRGGGLRFGEMERDCMIAHGIAGFLKERM 343
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match:
A0A8A0XYQ8_9PEZI (DNA-directed RNA polymerase (Fragment) n=1 Tax=Watsoniomyces obsoletus TaxID=2796175 RepID=A0A8A0XYQ8_9PEZI)
HSP 1 Score: 304 bits (779), Expect = 1.560e-99
Identity = 141/219 (64.38%), Postives = 178/219 (81.28%), Query Frame = 1
Query: 1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
++D S +R TE G+VD+V++TTN +G R VKVR+R +IP+IGDKFASRHGQKGT+G+ YR+EDMPFTR+ I PD+I+NPHA+PSRMT+ LIEC LSK + GFEGDATPF T +VD + L+DHGYQ G EVMY GHTG++L QIFLGPTYYQRL+HMV DK+HAR+RGP +L RQP+EGR++ GGLRFGEMERDC+VAHG ++ L+ R+
Sbjct: 196 KRDMSTPLRTTESGIVDKVLVTTNSEGLRFVKVRMRTTKIPQIGDKFASRHGQKGTIGITYRQEDMPFTRQGIVPDLIINPHAIPSRMTIAHLIECQLSKVSALKGFEGDATPF-TDVTVDSVSQLLRDHGYQSRGFEVMYNGHTGKKLVAQIFLGPTYYQRLRHMVDDKIHARARGPVQILTRQPVEGRARDGGLRFGEMERDCMVAHGASAFLKERL 413
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match:
A0A7S0NSX2_9EUKA (DNA-directed RNA polymerase subunit beta n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NSX2_9EUKA)
HSP 1 Score: 310 bits (795), Expect = 3.860e-99
Identity = 144/219 (65.75%), Postives = 187/219 (85.39%), Query Frame = 1
Query: 1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
R+D+S +R +E G VD+V+LTTN++G++ VKVRVR+VR+P+IGDKFASRHGQKGT+G+ YR+EDMPF+ E ITPDII+NPHA+PSRMT+G L+EC+LSK + G EGDATPF T+ +VD+ K LQ+ GYQ+ G EVM+ GHTGRR+E +FLGPTYYQRLKHMV DK+H+R+RGP +LL RQPMEGR++ GGLRFGEMERDC+++HG AS+L+ R+
Sbjct: 383 RRDASTPLRSSEAGYVDQVLLTTNQEGRKFVKVRVRSVRVPQIGDKFASRHGQKGTIGITYRQEDMPFSCEGITPDIIVNPHAIPSRMTIGHLVECLLSKVSSLTGDEGDATPF-TSVNVDEISKLLQNFGYQKRGFEVMFNGHTGRRMEANVFLGPTYYQRLKHMVDDKIHSRARGPVTLLTRQPMEGRARDGGLRFGEMERDCMISHGVASILKERL 600
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match:
A0A7S1C2I4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2I4_9STRA)
HSP 1 Score: 321 bits (822), Expect = 6.750e-99
Identity = 150/218 (68.81%), Postives = 184/218 (84.40%), Query Frame = 1
Query: 1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSR 654
++D+SV +R E GV+DRVMLTTN+DG+R KVR+R+VR+P+IGDKFASRHGQKGT+GM YR EDMP++RE + PDII+NPHA+PSRMT+G LIEC++ K + GF GDATPF ++ +V+ L +HGYQR GNEVM+ GHTGR+LE Q+FLGPTYYQRLKHMV DKVHAR+RGP +LL RQPMEGRS+ GGLRFGEMERDCI+AHGTA LL+ R
Sbjct: 922 KRDTSVVVRHNETGVIDRVMLTTNRDGERFTKVRIRSVRVPQIGDKFASRHGQKGTIGMTYRMEDMPWSREGVVPDIIVNPHAIPSRMTIGHLIECLMGKVMTQLGFLGDATPF-SSVTVEYVAGLLHEHGYQRNGNEVMFNGHTGRKLEAQVFLGPTYYQRLKHMVGDKVHARARGPVALLTRQPMEGRSRDGGLRFGEMERDCIIAHGTAQLLQER 1138
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match:
A0A0V0XVX8_TRIPS (DNA-directed RNA polymerase n=1 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V0XVX8_TRIPS)
HSP 1 Score: 307 bits (786), Expect = 1.010e-98
Identity = 143/219 (65.30%), Postives = 176/219 (80.37%), Query Frame = 1
Query: 1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
+KD+S F+R +E G+VD+VML+ N DG + VKVRVR++RIP+IGDKFASRHGQKGT+GM+YR+EDMPFT E ITPDII+NPHA+PSRMT+G LIEC+ K G GDATPF + +V K LQD+GY GNEVMY G TGR+L TQ+F+GPTYYQRLKHMV DK+H+R+RGP ++ RQPMEGRS+ GGLRFGEMERDC +AHG A L+ R+
Sbjct: 298 KKDASTFLRASETGIVDQVMLSVNADGNKFVKVRVRSIRIPQIGDKFASRHGQKGTIGMVYRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANRGEIGDATPFNDSVNVQKVSSLLQDYGYHLRGNEVMYSGFTGRKLNTQVFIGPTYYQRLKHMVDDKIHSRARGPLQMMARQPMEGRSRDGGLRFGEMERDCQIAHGAAHFLKERL 516
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match:
Q70Q07_VICSA (DNA-directed RNA polymerase (Fragment) n=7 Tax=Pentapetalae TaxID=1437201 RepID=Q70Q07_VICSA)
HSP 1 Score: 301 bits (770), Expect = 1.430e-98
Identity = 145/219 (66.21%), Postives = 173/219 (79.00%), Query Frame = 1
Query: 1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
++D S+ +R +E+G+VD+V+LTTN DG R VKVRVR+VRIP+IGDKF+SRHGQKGTVGM Y +EDMP+T E ITPDII+NPHA+PSRMT+GQLIEC++ K G EGDATPF T +VD K L GYQ G E MY GHTGRRL IFLGPTYYQRLKHMV DK+H+R RGP +L RQP EGRS+ GGLRFGEMERDC++AHG A L+ R+
Sbjct: 160 KRDHSISLRHSENGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPF-TDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERL 377
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Match:
A0A146IHK4_MYCCL (DNA-directed RNA polymerase n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146IHK4_MYCCL)
HSP 1 Score: 303 bits (776), Expect = 2.010e-98
Identity = 140/219 (63.93%), Postives = 177/219 (80.82%), Query Frame = 1
Query: 1 RKDSSVFMRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTVGMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGFEGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGPTYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIVAHGTASLLRSRM 657
R+D S ++ TE G+VD+V++TTN DGQ+ VKVRVR RIP+IGDKFASRHGQKGT+G+ YR+EDMPFT E I PDII+NPHA+PSRMT+G L+EC+LSK + G EGDATPF T +V+ FL++ GYQ G EVMY GHT R+L+ Q++LGPTYYQRLKHMV DK+H+R+RGP +L RQP+EGRS+ GGLRFGEMERDC+++HG A L+ R+
Sbjct: 200 RRDVSTPLKSTESGIVDQVLITTNSDGQKFVKVRVRATRIPQIGDKFASRHGQKGTIGITYRQEDMPFTAEGIVPDIIINPHAIPSRMTIGHLVECLLSKVATLIGNEGDATPF-TELTVESVSTFLREKGYQSRGLEVMYHGHTARKLQAQVYLGPTYYQRLKHMVDDKIHSRARGPVQILTRQPVEGRSRDGGLRFGEMERDCMISHGIAGFLKERL 417
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101033.225.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90 )
Total hits: 25
0 1 Expect = 2.62e-107 / Id = 70.78 Expect = 1.02e-101 / Id = 65.30 Expect = 2.52e-100 / Id = 71.23 Expect = 3.85e-100 / Id = 63.01 Expect = 1.56e-99 / Id = 64.38 Expect = 3.86e-99 / Id = 65.75 Expect = 6.75e-99 / Id = 68.81 Expect = 1.01e-98 / Id = 65.30 Expect = 1.43e-98 / Id = 66.21 Expect = 2.01e-98 / Id = 63.93 Sequence A0A482RDA3_9ARCH A0A7S3SQ47_EMIHU A0A5A8DDD1_CAFRO A0A077RC16_9BASI A0A8A0XYQ8_9PEZI A0A7S0NSX2_9EUKA A0A7S1C2I4_9STRA A0A0V0XVX8_TRIPS Q70Q07_VICSA A0A146IHK4_MYCCL
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Fungi
Seed ortholog score 309.3
Seed ortholog evalue 1.4e-81
Seed eggNOG ortholog 5217.XP_007002088.1
Preferred name RPB2
KEGG rclass RC02795
KEGG ko ko:K03010
KEGG Reaction R00435,R00441,R00442,R00443
KEGG Pathway ko00230,ko00240,ko01100,ko03020,ko05016,ko05169,map00230,map00240,map01100,map03020,map05016,map05169
KEGG Module M00180
Hectar predicted targeting category other localisation
GOs GO:0000228,GO:0000428,GO:0000775,GO:0000785,GO:0000790,GO:0000792,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005694,GO:0005720,GO:0005721,GO:0005737,GO:0005739,GO:0006139,GO:0006325,GO:0006342,GO:0006351,GO:0006355,GO:0006366,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016458,GO:0016591,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030880,GO:0031047,GO:0031048,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031618,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0040029,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0098687,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1990234,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc. DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
EggNOG OGs 38F5S@33154,3NW78@4751,3UYSF@5204,3VE8R@5234,COG0085@1,KOG0214@2759
EC 2.7.7.6
COG Functional cat. K
Best tax level Tremellales
Best eggNOG OG NA|NA|NA
BRITE br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400
Exons 1
Model size 657
Cds size 636
Stop 0
Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815507.8238122-UTR-M-pyrifera_M_contig101033:5..26 1622815507.8238122-UTR-M-pyrifera_M_contig101033:5..26 Macrocystis pyrifera P11B4 male UTR M-pyrifera_M_contig101033 6..26 +
1692277442.7952263-UTR-M-pyrifera_M_contig101033:5..26 1692277442.7952263-UTR-M-pyrifera_M_contig101033:5..26 Macrocystis pyrifera P11B4 male UTR M-pyrifera_M_contig101033 6..26 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815507.8369327-CDS-M-pyrifera_M_contig101033:26..662 1622815507.8369327-CDS-M-pyrifera_M_contig101033:26..662 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig101033 27..662 +
1692277442.8143451-CDS-M-pyrifera_M_contig101033:26..662 1692277442.8143451-CDS-M-pyrifera_M_contig101033:26..662 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig101033 27..662 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101033.225.1
>prot_M-pyrifera_M_contig101033.225.1 ID=prot_M-pyrifera_M_contig101033.225.1|Name=mRNA_M-pyrifera_M_contig101033.225.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=212bp
MRPTEHGVVDRVMLTTNKDGQRAVKVRVRNVRIPEIGDKFASRHGQKGTV GMLYREEDMPFTREAITPDIIMNPHAVPSRMTVGQLIECVLSKAVIIYGF EGDATPFLTTFSVDKPYKFLQDHGYQRAGNEVMYCGHTGRRLETQIFLGP TYYQRLKHMVADKVHARSRGPTSLLVRQPMEGRSKGGGLRFGEMERDCIV AHGTASLLRSRM back to top mRNA from alignment at M-pyrifera_M_contig101033:6..662+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101033.225.1 ID=mRNA_M-pyrifera_M_contig101033.225.1|Name=mRNA_M-pyrifera_M_contig101033.225.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=657bp|location=Sequence derived from alignment at M-pyrifera_M_contig101033:6..662+ (Macrocystis pyrifera P11B4 male)CGCAAAGATTCATCTGTTTTC ATGCGTCCAACTGAACATGGTGTAGTTGA
TCGTGTCATGTTGACAACCAACAAGGATGGACAACGTGCAGTCAAAGTGA
GAGTGCGAAACGTGCGTATTCCTGAAATTGGTGACAAGTTTGCCAGTCGT
CACGGACAGAAAGGAACAGTGGGGATGTTGTATCGTGAAGAAGATATGCC
ATTTACTCGTGAGGCAATCACTCCTGACATTATCATGAACCCTCATGCTG
TTCCATCTCGAATGACAGTTGGTCAGTTGATTGAATGCGTGCTTTCGAAA
GCAGTGATTATCTATGGATTTGAAGGAGATGCAACTCCATTCTTGACAAC
TTTCTCCGTTGACAAGCCATACAAATTCTTACAAGACCATGGCTACCAAC
GAGCTGGCAACGAAGTGATGTATTGTGGCCACACTGGCCGTCGACTTGAA
ACGCAAATCTTCCTCGGACCCACCTACTACCAACGTCTCAAGCATATGGT
TGCAGACAAAGTCCATGCACGTTCACGAGGTCCAACATCTCTCCTTGTCC
GCCAACCAATGGAAGGGCGAAGCAAAGGTGGAGGATTGCGATTTGGAGAA
ATGGAACGAGATTGCATTGTTGCTCATGGCACAGCATCTCTCCTTCGCTC
TCGCATG back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101033:6..662+
>mRNA_M-pyrifera_M_contig101033.225.1 ID=mRNA_M-pyrifera_M_contig101033.225.1|Name=mRNA_M-pyrifera_M_contig101033.225.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1272bp|location=Sequence derived from alignment at M-pyrifera_M_contig101033:6..662+ (Macrocystis pyrifera P11B4 male) ATGCGTCCAACTGAACATGGTGTAGTTGATCGTGTCATGTTGACAACCAA CAAGGATGGACAACGTGCAGTCAAAGTGAGAGTGCGAAACGTGCGTATTC CTGAAATTGGTGACAAGTTTGCCAGTCGTCACGGACAGAAAGGAACAGTG GGGATGTTGTATCGTGAAGAAGATATGCCATTTACTCGTGAGGCAATCAC TCCTGACATTATCATGAACCCTCATGCTGTTCCATCTCGAATGACAGTTG GTCAGTTGATTGAATGCGTGCTTTCGAAAGCAGTGATTATCTATGGATTT GAAGGAGATGCAACTCCATTCTTGACAACTTTCTCCGTTGACAAGCCATA CAAATTCTTACAAGACCATGGCTACCAACGAGCTGGCAACGAAGTGATGT ATTGTGGCCACACTGGCCGTCGACTTGAAACGCAAATCTTCCTCGGACCC ACCTACTACCAACGTCTCAAGCATATGGTTGCAGACAAAGTCCATGCACG TTCACGAGGTCCAACATCTCTCCTTGTCCGCCAACCAATGGAAGGGCGAA GCAAAGGTGGAGGATTGCGATTTGGAGAAATGGAACGAGATTGCATTGTT GCTCATGGCACAGCATCTCTCCTTCGCTCTCGCATGATGCGTCCAACTGA ACATGGTGTAGTTGATCGTGTCATGTTGACAACCAACAAGGATGGACAAC GTGCAGTCAAAGTGAGAGTGCGAAACGTGCGTATTCCTGAAATTGGTGAC AAGTTTGCCAGTCGTCACGGACAGAAAGGAACAGTGGGGATGTTGTATCG TGAAGAAGATATGCCATTTACTCGTGAGGCAATCACTCCTGACATTATCA TGAACCCTCATGCTGTTCCATCTCGAATGACAGTTGGTCAGTTGATTGAA TGCGTGCTTTCGAAAGCAGTGATTATCTATGGATTTGAAGGAGATGCAAC TCCATTCTTGACAACTTTCTCCGTTGACAAGCCATACAAATTCTTACAAG ACCATGGCTACCAACGAGCTGGCAACGAAGTGATGTATTGTGGCCACACT GGCCGTCGACTTGAAACGCAAATCTTCCTCGGACCCACCTACTACCAACG TCTCAAGCATATGGTTGCAGACAAAGTCCATGCACGTTCACGAGGTCCAA CATCTCTCCTTGTCCGCCAACCAATGGAAGGGCGAAGCAAAGGTGGAGGA TTGCGATTTGGAGAAATGGAACGAGATTGCATTGTTGCTCATGGCACAGC ATCTCTCCTTCGCTCTCGCATG back to top