mRNA_M-pyrifera_M_contig1009.195.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1009.195.1
Unique NamemRNA_M-pyrifera_M_contig1009.195.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1009.195.1 vs. uniprot
Match: D7G851_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G851_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 2.180e-141
Identity = 221/261 (84.67%), Postives = 238/261 (91.19%), Query Frame = 1
Query:    1 VDNLFVFLMTFDYFRVPLEHQRRVLTWGIVGAVLMRGIMIAFGVAVVKRFQWITLVFAAILLLSSYKLLVESEDEDHDLSQNTLVRISKRLVGAVDAYDGDRFFTKIGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFVVFSSNLFAIMALRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEFVHIKVSTGASLLVVLCLIGGGVGLSLLARR-HQAPAGRHKRRKSGEVLSPPC-SGGVGGSSGSF 777
            VDNLFVFLMTFDYF+VPLEHQ RVLTWGIVGA+LMRG+MIAFGVA VKRFQWIT+VFAAILL+SSYKLLVESE+EDHDLSQNTLVR+SKRLVGAVD YDGDRFFT++GGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLG+SQDPFVVF+SNLFAIM LRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLE+VHI +STG SL VVL LI GGVGLSLLARR  +AP  RHKRRKSG+V   P  +G   G +G F
Sbjct:  157 VDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSKRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARRCRRAPVVRHKRRKSGDVPPLPARNGNEEGGAGDF 417          
BLAST of mRNA_M-pyrifera_M_contig1009.195.1 vs. uniprot
Match: A0A6H5LI88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI88_9PHAE)

HSP 1 Score: 396 bits (1018), Expect = 2.500e-136
Identity = 220/287 (76.66%), Postives = 237/287 (82.58%), Query Frame = 1
Query:    1 VDNLFVFLMTFDYFRVPLEHQRRVLTWGIVGAVLMRGIMIAFGVAVVKRFQWITLVFAAILLLSSYKLLVESEDEDHDLSQNTLVRISKRLVGAVDAYDGDRFFTKIGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQ--------------------------DPFVVFSSNLFAIMALRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEFVHIKVSTGASLLVVLCLIGGGVGLSLLARR-HQAPAGRHKRRKSGEVLSPPCSGGVG-GSSGSF 777
            VDNLFVFLMTFDYF+VPLEHQ RVLTWGIVGA+LMRG+MIAFGVA VKRFQWIT+VFAAILL+SSYKLLVESE+EDHDLSQNTLVR+S+RLVGAVD YDGDRFFT++GGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLG+SQ                          DPFVVF+SNLFAIM LRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLE+VHI +STG SL VVL LI GGVGLSLLARR  +AP  RHKRRKSG+    P   G G G +G F
Sbjct:   52 VDNLFVFLMTFDYFQVPLEHQGRVLTWGIVGAILMRGVMIAFGVAAVKRFQWITVVFAAILLVSSYKLLVESEEEDHDLSQNTLVRMSRRLVGAVDEYDGDRFFTRLGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGISQARHIDLLPANFSWQMWLRMSHNTPSRDPFVVFTSNLFAIMGLRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEYVHINISTGWSLFVVLSLILGGVGLSLLARRCRRAPVVRHKRRKSGDAPPLPARNGDGEGVAGDF 338          
BLAST of mRNA_M-pyrifera_M_contig1009.195.1 vs. uniprot
Match: A0A835ZA94_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA94_9STRA)

HSP 1 Score: 278 bits (711), Expect = 1.020e-90
Identity = 148/239 (61.92%), Postives = 185/239 (77.41%), Query Frame = 1
Query:    1 VDNLFVFLMTFDYFRVPLEHQRRVLTWGIVGAVLMRGIMIAFGVAVVKRFQWITLVFAAILLLSSYKLLVESEDEDHDLSQNTLVRISKRLVGAVDAYDGDRFFTKIGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFVVFSSNLFAIMALRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEFVHIKVSTGASLLVVLCLIGGGVGLSLLARRHQAP---AGRHK 708
            VDNLFVF+M F+YF+VP  +Q RVLTWGI+GAV MR +MI  GVA ++RF+ + L FAAILL SS KLL E EDED DLS N ++RISK  V + D Y+G++FFT + G  K +ATPLLLCLVCIELSDFVFAVDSIPAVLGVS+D F+V+SSN+FAI+ALRS+Y +++ A++ LPYLKP+VALVLGFVG KM  E+ H ++  G SL VV  L+ GGVG S+   R +A    +GRHK
Sbjct:   36 VDNLFVFIMLFEYFKVPAAYQGRVLTWGIIGAVSMRAVMIVVGVAAIQRFRGVILAFAAILLASSVKLLTEKEDEDGDLSNNIVLRISKFFVRSTDKYEGEKFFTVVDG--KKMATPLLLCLVCIELSDFVFAVDSIPAVLGVSKDTFIVYSSNVFAILALRSLYTLVSHAITDLPYLKPSVALVLGFVGLKMCAEYFHYEIGIGVSLSVVAVLLSGGVGASIWDNRRRARLGLSGRHK 272          
BLAST of mRNA_M-pyrifera_M_contig1009.195.1 vs. uniprot
Match: A0A7R9UD78_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UD78_9STRA)

HSP 1 Score: 277 bits (708), Expect = 7.060e-89
Identity = 150/227 (66.08%), Postives = 185/227 (81.50%), Query Frame = 1
Query:    1 VDNLFVFLMTFDYFRVPLEHQRRVLTWGIVGAVLMRGIMIAFGVAVVKRFQWITLVFAAILLLSSYKLLVESEDEDHDLSQNTLVRISKRLVGAV-DAYDGDRFFTKIGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFVVFSSNLFAIMALRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEFVHIKVSTGASLLVVLCLIGGGVGLSLLAR 678
            VDNLFVFLM F YF+VPL HQ RVLTWGIVGAVLMRG MIA GVA V+ F+W+ LVFAA+L+ SS K+L   E+E  DLS N ++++SK+L+G V D YDG++FFT+ GG    VATPLLLCLVCIE+SDFVFAVDSIPAVLGVS DPF+V++SN+FAI+ALRS+Y ++A+AV+ LPYLK AVALVL F+G KM+LEF  + +  G SL VVL L+ GGV LS++AR
Sbjct:  129 VDNLFVFLMLFAYFKVPLLHQGRVLTWGIVGAVLMRGFMIAVGVAAVQHFRWMILVFAAVLVFSSVKML-SGEEEQEDLSDNYIIKMSKKLLGTVTDRYDGEKFFTEQGG--AKVATPLLLCLVCIEISDFVFAVDSIPAVLGVSHDPFIVYTSNIFAIIALRSLYTLVARAVNDLPYLKHAVALVLFFIGVKMVLEFFGVDIGIGTSLTVVLLLLVGGVVLSMIAR 352          
BLAST of mRNA_M-pyrifera_M_contig1009.195.1 vs. uniprot
Match: A0A7S2RH37_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH37_9STRA)

HSP 1 Score: 272 bits (696), Expect = 9.990e-88
Identity = 145/227 (63.88%), Postives = 185/227 (81.50%), Query Frame = 1
Query:    1 VDNLFVFLMTFDYFRVPLEHQRRVLTWGIVGAVLMRGIMIAFGVAVVKRFQWITLVFAAILLLSSYKLLVESEDEDHDLSQNTLVRISKRLVGAVDAYDGDRFFTKIGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFVVFSSNLFAIMALRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEFVHIKVSTGASLLVVLCLIGGGVGLSLLARR 681
            VDNLFVFLM F+YF+VPL +Q RVLTWGI+GAV+MRGIMI  GVA V++F+ + L+FAAIL+LS+ KL  ES DE  DLS NT++R+SK  VGAV+ YDGD+FFT + G+ +  ATPLLLCLVCIELSDFVFAVDSIPAV+GVSQD  +V+SSN+FAIM LRS+Y ++A+AV  LPYL+PAVALVL F+G KM++EF H ++S   SL VV+ L+  G+ LSL+ ++
Sbjct:   58 VDNLFVFLMLFNYFQVPLSYQGRVLTWGIIGAVVMRGIMIVAGVAAVQKFRMVILLFAAILMLSAVKLFFES-DEPEDLSNNTVMRLSKFAVGAVEEYDGDKFFTILDGQRR--ATPLLLCLVCIELSDFVFAVDSIPAVIGVSQDLLIVYSSNIFAIMGLRSLYTLVAKAVQDLPYLRPAVALVLAFIGLKMVMEFFHYEISISLSLGVVVTLLASGIVLSLIHKK 281          
BLAST of mRNA_M-pyrifera_M_contig1009.195.1 vs. uniprot
Match: W7THX1_9STRA (Integral membrane protein TerC n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7THX1_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.160e-87
Identity = 143/229 (62.45%), Postives = 182/229 (79.48%), Query Frame = 1
Query:    1 VDNLFVFLMTFDYFRVPLEHQRRVLTWGIVGAVLMRGIMIAFGVAVVKRFQWITLVFAAILLLSSYKLLVE--SEDEDHDLSQNTLVRISKRLVGAVDAYDGDRFFTKIGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFVVFSSNLFAIMALRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEFVHIKVSTGASLLVVLCLIGGGVGLSLLARR 681
            VDN+FVF+M F+YF+VP+E+Q R L+WGI+GAV MRGIMI  GVA ++RF+W+ L+FA +LL S++KLL E   E  + DLS N LV  +K+LV AVD YDGD FFT+    GK  ATPL +CL+CIELSDFVFAVDSIPAVLGVS+DP +V+SSN+FAIMALRS+Y ++A AV+ L Y+KP+VALVL FVG KM+ EF H++V    SL VV+ L+GGG+GLSLL +R
Sbjct:  150 VDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTR--RNGKRYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSLLKQR 376          
BLAST of mRNA_M-pyrifera_M_contig1009.195.1 vs. uniprot
Match: F0Y6P3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6P3_AURAN)

HSP 1 Score: 272 bits (695), Expect = 1.290e-87
Identity = 143/229 (62.45%), Postives = 179/229 (78.17%), Query Frame = 1
Query:    1 VDNLFVFLMTFDYFRVPLEHQRRVLTWGIVGAVLMRGIMIAFGVAVVKRFQWITLVFAAILLLSSYKLLVESEDEDHDLSQNTLVRISKRLVGAVDAYDGDRFFTKIGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFVVFSSNLFAIMALRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEFVHIKVSTGASLLVVLCLIGGGVGLSLLARRHQ 687
            VDNLFVF+M F+YFRVP   Q+RVL+WGIVGA+LMRG+MI  GVA VKRF+W +L+FA ILLLSS KLL+E  DED D+  N ++R+S++LVGA   YDGDRFFT + G  +  ATPLLLCLVC+ELSD VFAVDSIPAVLG+S DPFVV+SSN+FAI  LR++Y ++A+AV  + YLKPAV  VL F+  KM+LE+ H  + TGASL VV+CL+  G   SLLA + +
Sbjct:   55 VDNLFVFIMLFEYFRVPPAFQQRVLSWGIVGAILMRGVMIVAGVAAVKRFRWTSLLFAGILLLSSVKLLMEG-DEDEDVGDNLVMRLSRKLVGATTEYDGDRFFTVVDGAKR--ATPLLLCLVCVELSDVVFAVDSIPAVLGISTDPFVVYSSNVFAIAGLRALYALVAKAVDSMVYLKPAVCAVLVFISVKMILEYFHYAIGTGASLCVVVCLLALGAAASLLASKRK 280          
BLAST of mRNA_M-pyrifera_M_contig1009.195.1 vs. uniprot
Match: A0A7S2Y1S8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1S8_9STRA)

HSP 1 Score: 273 bits (698), Expect = 1.790e-87
Identity = 142/232 (61.21%), Postives = 186/232 (80.17%), Query Frame = 1
Query:    1 VDNLFVFLMTFDYFRVPLEHQRRVLTWGIVGAVLMRGIMIAFGVAVVKRFQWITLVFAAILLLSSYKLLVESEDEDHDLSQNTLVRISKRLVGAVDAYDGDRFFTKIGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFVVFSSNLFAIMALRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEFVHIKVSTGASLLVVLCLIGGGVGLSLLARRHQAPA 696
            VDNLFVFLM FDYF+VPL +Q R LTWGI+GA+ MR +MI  GVA +++F+ + L+FA ILL SS+KL  E E+ D DLS N +++IS ++  +VD YDG++FFTK+ G     ATPLL+CLVCIELSDFVFAVDSIPAV+GV++DPF+V+SSN+FAIMALRS+YV++AQAV+ LPYL+PAVALVL FVG KM+ EF H ++ST  SL VV  ++GGG+ LS++  + +A A
Sbjct:  128 VDNLFVFLMLFDYFKVPLAYQNRCLTWGIIGAMSMRLVMILLGVAAIQKFRVVILLFAGILLASSWKLFFE-EEGDEDLSDNVILKISNKMFKSVDHYDGEKFFTKVNGVRH--ATPLLMCLVCIELSDFVFAVDSIPAVIGVTKDPFIVYSSNMFAIMALRSLYVLVAQAVTDLPYLRPAVALVLAFVGAKMIAEFFHYELSTAISLAVVAAVLGGGIALSVVHNKAKAAA 356          
BLAST of mRNA_M-pyrifera_M_contig1009.195.1 vs. uniprot
Match: A0A7S3XZU5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZU5_HETAK)

HSP 1 Score: 269 bits (688), Expect = 1.390e-85
Identity = 138/230 (60.00%), Postives = 183/230 (79.57%), Query Frame = 1
Query:    1 VDNLFVFLMTFDYFRVPLEHQRRVLTWGIVGAVLMRGIMIAFGVAVVKRFQWITLVFAAILLLSSYKLLVESEDEDHDLSQNTLVRISKRLVGAVDAYDGDRFFTKIGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFVVFSSNLFAIMALRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEFVHIKVSTGASLLVVLCLIGGGVGLSLLARRHQA 690
            VDNLFVF+M FDYF+VP++ Q RVLTWGI+GA+ MR +MI  GVA +++F+ +TL+FA IL+ S YK++ ESE+E+ DL  N ++++S ++V +   YDG++FFTKI G     ATPLL+CL+CIELSDFVFAVDSIPAV+GV++DPF+V+SSNLFAI ALRS+Y ++A+AV  LPYLKPAVALVLGFVGCKM  E+ H +V  G SL VV  L+GGG+  S++A+   A
Sbjct:  142 VDNLFVFIMLFDYFKVPMQFQSRVLTWGIIGAMSMRLVMIVLGVAAIQKFRSVTLLFAGILIFSGYKMINESEEEE-DLEDNVIMKLSNKMVKSTTQYDGEKFFTKIDG--VKYATPLLMCLICIELSDFVFAVDSIPAVIGVTKDPFIVYSSNLFAIAALRSLYTLVAKAVDDLPYLKPAVALVLGFVGCKMAAEYFHYEVGIGISLGVVGILLGGGIVASVIAKNKAA 368          
BLAST of mRNA_M-pyrifera_M_contig1009.195.1 vs. uniprot
Match: A0A7S2E636_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E636_9STRA)

HSP 1 Score: 266 bits (681), Expect = 2.460e-85
Identity = 148/249 (59.44%), Postives = 186/249 (74.70%), Query Frame = 1
Query:    1 VDNLFVFLMTFDYFRVPLEHQRRVLTWGIVGAVLMRGIMIAFGVAVVKRFQWITLVFAAILLLSSYKLLVESEDEDHDLSQNTLVRISKRLVGAVDAYDGDRFFTKIGGKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFVVFSSNLFAIMALRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEFVHIKVSTGASLLVVLCLIGGGVGLSLLAR----RHQAPAGRHKRRKSGEVLS 735
            VDNLFVFLM F+YF+VPLE Q RVLTWGI+GAVLMRG+MI  GVA ++RF+ + L+FAAILL+S+ KL  ES DE  DLSQN +++ SK   GAVD YDG++F T +  + +  ATPLLLCLVCIELSDFVFAVDSIPAV+GVSQD  VV+SSNLFAIM LRS+Y ++A+AV  L YL+PAVALVL F+  KMLLEF H ++    SLLVV  L+ GG+ LSL  +    + + PA  +    S  +++
Sbjct:   60 VDNLFVFLMVFNYFQVPLECQGRVLTWGIIGAVLMRGVMITIGVAAIQRFRSVILIFAAILLVSAVKLFFES-DEPQDLSQNVVMKFSKFCTGAVDEYDGEKFITVVNNRRR--ATPLLLCLVCIELSDFVFAVDSIPAVIGVSQDALVVYSSNLFAIMGLRSLYTLVAKAVEDLAYLRPAVALVLCFISIKMLLEFFHYEIPIHLSLLVVALLLAGGIVLSLFFKNTDKKDREPADNNLSMSSSPIMA 305          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1009.195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G851_ECTSI2.180e-14184.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LI88_9PHAE2.500e-13676.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZA94_9STRA1.020e-9061.92Integral membrane protein TerC family-domain-conta... [more]
A0A7R9UD78_9STRA7.060e-8966.08Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2RH37_9STRA9.990e-8863.88Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7THX1_9STRA1.160e-8762.45Integral membrane protein TerC n=3 Tax=Monodopsida... [more]
F0Y6P3_AURAN1.290e-8762.45Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2Y1S8_9STRA1.790e-8761.21Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XZU5_HETAK1.390e-8560.00Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2E636_9STRA2.460e-8559.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1009contigM-pyrifera_M_contig1009:157..2975 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score397.1
Seed ortholog evalue6e-108
Seed eggNOG ortholog2880.D7G851
Hectar predicted targeting categorysignal anchor
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006996,GO:0007275,GO:0008150,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009657,GO:0009668,GO:0009791,GO:0009987,GO:0010027,GO:0016020,GO:0016043,GO:0031976,GO:0031984,GO:0032501,GO:0032502,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0048856,GO:0055035,GO:0061024,GO:0071840,GO:0090351
EggNOG free text desc.membrane protein TERC
EggNOG OGs2QQNF@2759,COG0861@1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size783
Cds size759
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1009.195.1prot_M-pyrifera_M_contig1009.195.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1009 181..2975 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815506.320996-UTR-M-pyrifera_M_contig1009:156..1801622815506.320996-UTR-M-pyrifera_M_contig1009:156..180Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1009 157..180 +
1692277442.0971353-UTR-M-pyrifera_M_contig1009:156..1801692277442.0971353-UTR-M-pyrifera_M_contig1009:156..180Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig1009 157..180 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815506.3327794-CDS-M-pyrifera_M_contig1009:180..4131622815506.3327794-CDS-M-pyrifera_M_contig1009:180..413Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1009 181..413 +
1692277442.1069167-CDS-M-pyrifera_M_contig1009:180..4131692277442.1069167-CDS-M-pyrifera_M_contig1009:180..413Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1009 181..413 +
1622815506.3451748-CDS-M-pyrifera_M_contig1009:1818..19961622815506.3451748-CDS-M-pyrifera_M_contig1009:1818..1996Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1009 1819..1996 +
1692277442.1153483-CDS-M-pyrifera_M_contig1009:1818..19961692277442.1153483-CDS-M-pyrifera_M_contig1009:1818..1996Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1009 1819..1996 +
1622815506.357638-CDS-M-pyrifera_M_contig1009:2627..29751622815506.357638-CDS-M-pyrifera_M_contig1009:2627..2975Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1009 2628..2975 +
1692277442.130559-CDS-M-pyrifera_M_contig1009:2627..29751692277442.130559-CDS-M-pyrifera_M_contig1009:2627..2975Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1009 2628..2975 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1009.195.1

>prot_M-pyrifera_M_contig1009.195.1 ID=prot_M-pyrifera_M_contig1009.195.1|Name=mRNA_M-pyrifera_M_contig1009.195.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=253bp
MTFDYFRVPLEHQRRVLTWGIVGAVLMRGIMIAFGVAVVKRFQWITLVFA
AILLLSSYKLLVESEDEDHDLSQNTLVRISKRLVGAVDAYDGDRFFTKIG
GKGKTVATPLLLCLVCIELSDFVFAVDSIPAVLGVSQDPFVVFSSNLFAI
MALRSIYVIIAQAVSQLPYLKPAVALVLGFVGCKMLLEFVHIKVSTGASL
LVVLCLIGGGVGLSLLARRHQAPAGRHKRRKSGEVLSPPCSGGVGGSSGS
FV*
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mRNA from alignment at M-pyrifera_M_contig1009:157..2975+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1009.195.1 ID=mRNA_M-pyrifera_M_contig1009.195.1|Name=mRNA_M-pyrifera_M_contig1009.195.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2819bp|location=Sequence derived from alignment at M-pyrifera_M_contig1009:157..2975+ (Macrocystis pyrifera P11B4 male)
GTGGACAACCTGTTCGTTTTCCTGATGACCTTCGACTACTTCCGAGTGCC CTTGGAGCACCAGCGGCGGGTGCTGACGTGGGGCATCGTGGGGGCAGTCC TCATGCGGGGCATTATGATAGCGTTCGGTGTGGCCGTGGTGAAGAGGTTT CAGTGGATAACGCTCGTTTTCGCCGCGATCCTGCTCTTGTCCTCCTACAA GCTGCTCGTCGAGTCCGAGGACGAAGACCACGACCTTAGCCAAAATACTT TAGTCAGGTATATATTTTTTTCGCGGCACGAAATAAAGCGGTCACGAGGA TGGATGCTACACGCGTGTGGTACCTTTCGCGTGTCTATTAAGATAGTGCA GTCGTAGCTCTGTCGCTAGGATGTCGCGCAGCAGAAGGAGCTAGTTGTAA GTTTTTGTCAACTTGTGTACCTTGGTTGATTTAAGGGGTGTGGAGAACAG TTGGTCGGCGGTCGTAGAACCGGCTTCAGGCGAGTTCGAACGATGCCCCT CTTACTTCGCTCGTTATTGATATACTGCTGTATATCGTAGTCTACTCGTG CGTACAAGTACTTTTCTGCGGCGGCTTTTTACGTATGCAGTATGTAGTAG AAGCACGAAACGAGAGGGAATTTTTCAGGGTGGAGTTGAAACGTTGTTTT AGGATGTGAAAGAGGCTTTTCAAGCAAACTAAGTATGAATTGTTGCGTTT TAATAATGGGGGTGCTTGCTGCTGCACGCCGCAAAATGCTGTCAACCTCA ACTTTCTGTAGTGAACCTTGCAGTTTGTACAACTGCGCGAAAAGGAGCGA CTACCGTCGACTTACTGTCAGCTCGCTGAATGATTCTTCTTACTTTCATT CGTCAGTCTGATCTATTTTCATTCGTCAGTCTGATCGCCCGCAAAGAAAC CAGCGGCATTAATTTGTAGAAAGGGACTATTTCTAGCATCGTAGCTTCCT GTCGCAACGGCTCGAGGTTCCGCTGAGCCTCCCAAGACAAGGACTGGTGC CCCGATCTAGTTTTGTTTTTGTTCATGCCTGTCTTTGTCCAAGCCAGCGC TTCCCCCCTGTAACAAGCCTCCGCCGCCGAAGAAAAGCAGGGCACGAAAT AAATGAAAAATCTGCTATTAATAATACGGGGGACCACAGTAAATAGCACC AAGTGTTGTGAGTAAAAATAGGGAAATGTATAGGTTTTTGTCTGTGTAGT AGTTCCTATTCACTATGGTTCCCCGTAATATTTGTAAGCAACAGTTACAT CATCTGAGGATCGCCTCGAACGCTCGGTCTCCCATGCCACCGAATGATTC TCTCTCGTCTCCCTTATACGCATGAAAAATAATCCCCACTCTATGAAGCA GATCAGAGCATGCAAAATTAATCCCCATTCTAGTTACAAGTAGATAGTAA GTGTCCCCAGAACAGTGGGTGTGGTTTTAAAGGACGTGTAACGTTTTTCC TACTACCAGGGTAGGGTGTATCCCGCTTTCATTCCAAGTAGTATGGCACA GAAACGAGGGCTAGGTGCGAGGAGTGCTTCTGTTTTATGTTAGCTTGTCG ATGTTCACGTCGTGAGATGTTGTCTCCCGCCGAACGAACGGCTATGAAGA CACCTCGTGCGTACATAGTATAGCACTTTTCCATAACTTTTTATTCCCTC GCGGGTCCACAGGATATCGAAGAGGCTTGTCGGGGCCGTGGATGCGTACG ATGGCGACCGTTTCTTCACCAAGATCGGGGGCAAAGGAAAGACGGTCGCG ACGCCCTTGTTACTCTGCTTGGTGTGCATTGAGCTCAGCGACTTCGTTTT CGCGGTAGATTCCATCCCGGCGGTGCTGGGAGTGAGCCAGGTGAGAAGAA AACAGAACGATGAGGCACCCATTTTTCCCAATGGGTCTGTAAGAAGAAGA GGCGGTGTGGATACCGTAACGCCTCCAATATGTCATGTATGCCAAGCACG TTGTATTCGAGGATAACCATAGGGTGAGTGGGGCGTATATCATGCCTTTT CTAGCCCCCCCCCCCCGCGCGCGCCCCTCGCCATGCGTTTTATCTTTTTA TCGGAGGCGTCTTTCGTCCCGAAGGAAATGAAATATCATTGTAGTGTTCG GAAGGAGATACTCCTGTTGGTTGCTGTGGGCATGGTGCCGCAGACTCCCA CCACGGCTTCTCCATAGGCGCACGAGCGGTCCGCAATCCCGAAGGCTTCA CCTGGCCGTTGACTCTGTTTATATATGCCCGCCGTCGGCAAACCTCATAC CTTGTATGTTCACAGCCGCTCGTTTTCGCGGCAGATTCGTGACATGTTGC GAGTGGGAGCAGTTTGCGTGCGCGCGCGCTGCTTGCTCAATGATGTCCAC GTTGACTGCTCGGTTCGCAACGTAACTAGCTGCGCTTCGCGAAACGTTCG AGAAGTTTTGTTTCTCTTGTTTGTGTCCGTTGTCCGGGCTGTCTGTCTGC ATCTGCGTCCCCGCCGCCCAGGATCCCTTCGTTGTGTTTTCGAGCAACCT GTTCGCCATCATGGCTTTGCGGAGCATTTACGTCATCATCGCGCAGGCGG TGAGCCAGCTGCCTTATCTCAAGCCTGCCGTGGCGCTCGTGCTCGGGTTC GTGGGCTGCAAGATGCTGCTCGAGTTCGTCCACATCAAGGTCAGCACCGG CGCGAGCTTGCTGGTCGTGCTGTGTCTCATCGGCGGGGGGGTCGGCTTGA GCTTGTTGGCTCGCCGACATCAGGCGCCGGCTGGGCGACATAAGAGAAGA AAGAGCGGGGAGGTACTGTCTCCCCCTTGTAGTGGAGGGGTAGGAGGGAG CTCTGGTTCGTTCGTTTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig1009:157..2975+

>mRNA_M-pyrifera_M_contig1009.195.1 ID=mRNA_M-pyrifera_M_contig1009.195.1|Name=mRNA_M-pyrifera_M_contig1009.195.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1518bp|location=Sequence derived from alignment at M-pyrifera_M_contig1009:157..2975+ (Macrocystis pyrifera P11B4 male)
ATGACCTTCGACTACTTCCGAGTGCCCTTGGAGCACCAGCGGCGGGTGCT
GACGTGGGGCATCGTGGGGGCAGTCCTCATGCGGGGCATTATGATAGCGT
TCGGTGTGGCCGTGGTGAAGAGGTTTCAGTGGATAACGCTCGTTTTCGCC
GCGATCCTGCTCTTGTCCTCCTACAAGCTGCTCGTCGAGTCCGAGGACGA
AGACCACGACCTTAGCCAAAATACTTTAGTCAGATGACCTTCGACTACTT
CCGAGTGCCCTTGGAGCACCAGCGGCGGGTGCTGACGTGGGGCATCGTGG
GGGCAGTCCTCATGCGGGGCATTATGATAGCGTTCGGTGTGGCCGTGGTG
AAGAGGTTTCAGTGGATAACGCTCGTTTTCGCCGCGATCCTGCTCTTGTC
CTCCTACAAGCTGCTCGTCGAGTCCGAGGACGAAGACCACGACCTTAGCC
AAAATACTTTAGTCAGGATATCGAAGAGGCTTGTCGGGGCCGTGGATGCG
TACGATGGCGACCGTTTCTTCACCAAGATCGGGGGCAAAGGAAAGACGGT
CGCGACGCCCTTGTTACTCTGCTTGGTGTGCATTGAGCTCAGCGACTTCG
TTTTCGCGGTAGATTCCATCCCGGCGGTGCTGGGAGTGAGCCAGGATATC
GAAGAGGCTTGTCGGGGCCGTGGATGCGTACGATGGCGACCGTTTCTTCA
CCAAGATCGGGGGCAAAGGAAAGACGGTCGCGACGCCCTTGTTACTCTGC
TTGGTGTGCATTGAGCTCAGCGACTTCGTTTTCGCGGTAGATTCCATCCC
GGCGGTGCTGGGAGTGAGCCAGGATCCCTTCGTTGTGTTTTCGAGCAACC
TGTTCGCCATCATGGCTTTGCGGAGCATTTACGTCATCATCGCGCAGGCG
GTGAGCCAGCTGCCTTATCTCAAGCCTGCCGTGGCGCTCGTGCTCGGGTT
CGTGGGCTGCAAGATGCTGCTCGAGTTCGTCCACATCAAGGTCAGCACCG
GCGCGAGCTTGCTGGTCGTGCTGTGTCTCATCGGCGGGGGGGTCGGCTTG
AGCTTGTTGGCTCGCCGACATCAGGCGCCGGCTGGGCGACATAAGAGAAG
AAAGAGCGGGGAGGTACTGTCTCCCCCTTGTAGTGGAGGGGTAGGAGGGA
GCTCTGGTTCGTTCGTTTGAGATCCCTTCGTTGTGTTTTCGAGCAACCTG
TTCGCCATCATGGCTTTGCGGAGCATTTACGTCATCATCGCGCAGGCGGT
GAGCCAGCTGCCTTATCTCAAGCCTGCCGTGGCGCTCGTGCTCGGGTTCG
TGGGCTGCAAGATGCTGCTCGAGTTCGTCCACATCAAGGTCAGCACCGGC
GCGAGCTTGCTGGTCGTGCTGTGTCTCATCGGCGGGGGGGTCGGCTTGAG
CTTGTTGGCTCGCCGACATCAGGCGCCGGCTGGGCGACATAAGAGAAGAA
AGAGCGGGGAGGTACTGTCTCCCCCTTGTAGTGGAGGGGTAGGAGGGAGC
TCTGGTTCGTTCGTTTGA
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