mRNA_M-pyrifera_M_contig10081.173.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: D7FXK3_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK3_ECTSI) HSP 1 Score: 190 bits (482), Expect = 4.900e-54 Identity = 96/127 (75.59%), Postives = 108/127 (85.04%), Query Frame = 1 Query: 1 KTATAESLADALNRAMRVEP---AAKEFLAMPYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAFLAKKPQPIAG 372 K TAE LA ALNRA+R E K FLAMPYHGKM D +R++AQA+FMSGEVDVI GSVAFGMG+DKSDVRFVVHWDLPKS+EGLYQELGRAGRDGS A SVVYHS+E+ LLAFLA+KP+P+AG Sbjct: 295 KRDTAEELAKALNRALREESLLDGGKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAG 421
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: A0A6H5KCP0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP0_9PHAE) HSP 1 Score: 187 bits (476), Expect = 5.510e-53 Identity = 98/129 (75.97%), Postives = 109/129 (84.50%), Query Frame = 1 Query: 1 KTATAESLADALNRAMRVEP---AAKEFLAMPYHGKMGDAERSDAQAR--FMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAFLAKKPQPIAG 372 K TAE LA ALNRA+R E K FLAMPYHGKM D +R++AQAR FMSGEVDVITGSVAFGMG+DKSDVRFVVHWDLPKS+EGLYQELGRAGRDGS A SVVYHS+E+ LLAFLA+KP+P+AG Sbjct: 133 KRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQARAKFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVELLAFLARKPRPLAG 261
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: B5YN30_THAPS (DNA helicase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YN30_THAPS) HSP 1 Score: 108 bits (271), Expect = 1.870e-26 Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = 1 Query: 73 FLAMPYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAFLAK 351 +A YH + DAER D Q ++ +G V V +VAFGMGID VR+VVHW L KS+EG YQE GRAGRDG P+ S++Y+S++ AS AFL K Sbjct: 199 LVAAAYHAGLKDAEREDTQQKWTAGSVHVAVATVAFGMGIDLPHVRYVVHWSLAKSLEGFYQESGRAGRDGKPSISILYYSKDDASKFAFLLK 291
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: UPI001985D810 (hypothetical protein n=1 Tax=Okeania sp. KiyG1 TaxID=2720165 RepID=UPI001985D810) HSP 1 Score: 103 bits (256), Expect = 5.140e-26 Identity = 45/77 (58.44%), Postives = 59/77 (76.62%), Query Frame = 1 Query: 79 AMPYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVY 309 A+PYH M D ER+ Q +F+ ++DVI +VAFGMGI+K DVRFV+H+DLPK++EG YQE GRAGRDG PA ++ Sbjct: 35 ALPYHAGMDDEERAINQTKFIRDDIDVIVATVAFGMGINKPDVRFVIHYDLPKNIEGYYQETGRAGRDGEPAKCTLF 111
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: A0A2T1CRB2_9CYAN (DNA helicase n=1 Tax=filamentous cyanobacterium CCP2 TaxID=2107700 RepID=A0A2T1CRB2_9CYAN) HSP 1 Score: 109 bits (272), Expect = 2.810e-25 Identity = 47/79 (59.49%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 79 AMPYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHS 315 A+PYH MGDA+R++ Q RF+ +V V+ ++AFGMGI+K DVRFVVH+DLP+++EG YQE GRAGRDG PA ++Y+S Sbjct: 268 ALPYHAGMGDAQRTENQTRFIRDDVQVMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAQCILYYS 346
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: A0A1Y1I869_KLENI (ATP-dependent DNA helicase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I869_KLENI) HSP 1 Score: 109 bits (272), Expect = 2.820e-25 Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 1 Query: 85 PYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAFLAKK 354 PYH + DAERS +++G + V+ ++AFGMGID++DVR VVH+++PKS+EG YQE GRAGRDG PA SV+Y+ E SL+ F+ +K Sbjct: 302 PYHAGLPDAERSRTLKDWVTGRIPVVAATIAFGMGIDRADVRLVVHFNMPKSIEGFYQESGRAGRDGQPAKSVLYYGSEDESLMQFILRK 391
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: A0A317T5X7_9CHLB (DNA helicase n=1 Tax=Prosthecochloris marina TaxID=2017681 RepID=A0A317T5X7_9CHLB) HSP 1 Score: 108 bits (271), Expect = 3.530e-25 Identity = 51/93 (54.84%), Postives = 63/93 (67.74%), Query Frame = 1 Query: 64 AKEFLAMPYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAF 342 AK F +PYH +GD ER Q F+ EVDVI ++AFGMGIDKS++RFV+H DLPKS+E YQE GRAGRDG PA ++ SQ + F Sbjct: 269 AKGFRVLPYHAGLGDEERKKNQEAFIRDEVDVIVATIAFGMGIDKSNIRFVIHADLPKSIENYYQETGRAGRDGEPAQCIMLFSQSDIPKVRF 361
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: UPI00168624A5 (DNA helicase RecQ n=1 Tax=Oscillatoria sp. FACHB-1407 TaxID=2692847 RepID=UPI00168624A5) HSP 1 Score: 108 bits (270), Expect = 3.790e-25 Identity = 51/99 (51.52%), Postives = 70/99 (70.71%), Query Frame = 1 Query: 79 AMPYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAFL-AKKPQPIAG 372 A+PYH + DAER+ Q RF+ GEV V+ ++AFGMGIDK D+RFV+H+DLP+++EG YQE GRAGRDG +A ++ S + +L A+K PI G Sbjct: 268 ALPYHAGLSDAERTLNQTRFIQGEVRVMVATIAFGMGIDKPDIRFVIHFDLPRNMEGYYQECGRAGRDGQSSACTLFFSYGDIKTIEYLIAQKVHPITG 366
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: A0A176VZW5_MARPO (ATP-dependent DNA helicase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VZW5_MARPO) HSP 1 Score: 108 bits (270), Expect = 5.260e-25 Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 1 Query: 88 YHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAFLAKKPQP 363 YH + RS+A + SG+V V+ +VAFGMGID+ DVR V H+++PKS+EG YQE GRAGRDG PA SV+Y+ E L+ FLA+KP P Sbjct: 327 YHAGLAAKARSEALEEWTSGKVPVVIATVAFGMGIDRKDVRMVCHYNVPKSLEGFYQESGRAGRDGKPARSVIYYGLEDKGLMEFLARKPDP 418
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Match: A0A7S2PHD3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PHD3_9STRA) HSP 1 Score: 105 bits (263), Expect = 5.510e-25 Identity = 54/118 (45.76%), Postives = 79/118 (66.95%), Query Frame = 1 Query: 1 KTATAESLADALNRAMRVEPAAKEFLAMPYHGKMGDAERSDAQARFMSGEVDVITGSVAFGMGIDKSDVRFVVHWDLPKSVEGLYQELGRAGRDGSPAASVVYHSQESASLLAFLAKK 354 K A A ++AD + RA ++ AA YH + D+ RS+ Q + G+V V+ +VAFGMGID + VR+V+HW L KSVEG YQE GRAGRDG + S++Y+S++ AS ++F+ +K Sbjct: 66 KRADAGNIADQITRATGIKAAA-------YHAGLKDSIRSETQQLWTKGDVQVVVATVAFGMGIDLAHVRYVIHWCLAKSVEGFYQESGRAGRDGLESISILYYSKDDASKISFIIRK 176 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10081.173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10081.173.1 >prot_M-pyrifera_M_contig10081.173.1 ID=prot_M-pyrifera_M_contig10081.173.1|Name=mRNA_M-pyrifera_M_contig10081.173.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp KTATAESLADALNRAMRVEPAAKEFLAMPYHGKMGDAERSDAQARFMSGEback to top mRNA from alignment at M-pyrifera_M_contig10081:500..4928- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10081.173.1 ID=mRNA_M-pyrifera_M_contig10081.173.1|Name=mRNA_M-pyrifera_M_contig10081.173.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4429bp|location=Sequence derived from alignment at M-pyrifera_M_contig10081:500..4928- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10081:500..4928- >mRNA_M-pyrifera_M_contig10081.173.1 ID=mRNA_M-pyrifera_M_contig10081.173.1|Name=mRNA_M-pyrifera_M_contig10081.173.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=744bp|location=Sequence derived from alignment at M-pyrifera_M_contig10081:500..4928- (Macrocystis pyrifera P11B4 male)back to top |