mRNA_M-pyrifera_M_contig100734.166.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100734.166.1 vs. uniprot
Match: A0A7S1GB31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GB31_9STRA) HSP 1 Score: 137 bits (345), Expect = 4.790e-36 Identity = 82/175 (46.86%), Postives = 109/175 (62.29%), Query Frame = 1 Query: 7 GRLGELLSSFPLATLSIMIVCCVLQLSVWLLGVQVMDVALLPVSVLYYFQLYRLVSASFFHGNLMHIVFNMMTMSMFGVALERLFGTSRFVMLTMSFVLLHNILYLAVCYFL--SFFDESWMVYASVGFSGVLFGYAAIESLMSTQPTRSLFGVVNVPTKWYPWVLMVVLQVRVP 525 GR+ E++S+ P TL I C + + L G + A+ VLY FQ YR+VS++F HG L H+ NM++ G +LERLFGT F L M VLL Y+ VC+ L S + SW+ Y SVGFSGV+F AA ES +ST PTR LFG++ VPT+ YPW L+V+LQV +P Sbjct: 6 GRMSEMMSTTPPTTLLFTIACVAIFVIQSLEGSDSIGCAIGAYPVLYQFQFYRIVSSAFCHGGLQHVGMNMLSFFFMGASLERLFGTVPFAYLLMLIVLLAGFAYVNVCWVLAWSLSEISWLRYYSVGFSGVIFANAAQESFLSTAPTRRLFGLITVPTRLYPWALLVLLQVLMP 180
BLAST of mRNA_M-pyrifera_M_contig100734.166.1 vs. uniprot
Match: A0A813CDR3_9DINO (RBL15 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CDR3_9DINO) HSP 1 Score: 130 bits (326), Expect = 1.690e-34 Identity = 80/182 (43.96%), Postives = 109/182 (59.89%), Query Frame = 1 Query: 4 AGRLGELLSSFPLATLSIMIVCCVLQLSVWLLGVQVMDVA------LLPVSVLYYFQLYRLVSASFFHGNLMHIVFNMMTMSMFGVALERLFGTSRFVMLTMSFVLLHNILYLAVCYFLSFFD--ESWMVYASVGFSGVLFGYAAIESLMSTQPTRSLFGVVNVPTKWYPWVLMVVLQVRVP 525 A R G + + P T M C L +LL + DVA + P +++YFQ YRL+S++FFHG L+HI FNMMT+ G +LER G+ + + +L +Y A C L + W++Y++VG+SGVLFG A ES +S PTRS+FG NVPTKWYPWVLMVVLQ+ +P Sbjct: 11 ATRGGGVFNYLPFTTTFFMCAC----LGTFLLQFFLPDVASTGEFAITPGFIVFYFQWYRLISSAFFHGGLLHIGFNMMTLYALGTSLERQLGSLHMFVTSWIILLTSGFMYTAACMLLWAVTGAQGWLLYSAVGYSGVLFGMAVQESALSFLPTRSVFGCFNVPTKWYPWVLMVVLQLVMP 188
BLAST of mRNA_M-pyrifera_M_contig100734.166.1 vs. uniprot
Match: D8LQJ6_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ6_ECTSI) HSP 1 Score: 115 bits (289), Expect = 4.070e-28 Identity = 66/173 (38.15%), Postives = 106/173 (61.27%), Query Frame = 1 Query: 7 GRLGELLSSFPLATLSIMIVCCVLQLSVWLLGVQVMDVALLPVSVLYYFQLYRLVSASFFHGNLMHIVFNMMTMSMFGVALERLFGTSRFVMLTMSFVLLHNILYLAVCYFLSFF---DESWMVYASVGFSGVLFGYAAIESLMSTQPTRSLFGVVNVPTKWYPWVLMVVLQV 516 LGE+ PL TL+ +C +LQ V++ + + L+P ++Y + YR+++ + HG LMHIVFNMM+ G +LE FGT + + ++L +++ + ++ + D +++ SVGFSGV+F A +ES STQPTRS+FG++ VPT+ YPWVL+V+L V Sbjct: 4 NNLGEVAGQVPLCTLAFATLCIILQGCVFVFNTNIGNYVLIPSRIIYLGEYYRVITGALLHGGLMHIVFNMMSFLSIGSSLEVAFGTLSLLFTILWSMILAGVVHCGAEWVMTVWVTHDPTYVNQPSVGFSGVIFTLALMESYRSTQPTRSVFGMMRVPTRMYPWVLLVLLSV 176
BLAST of mRNA_M-pyrifera_M_contig100734.166.1 vs. uniprot
Match: B8C3M6_THAPS (Rhomboid domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3M6_THAPS) HSP 1 Score: 114 bits (284), Expect = 2.830e-27 Identity = 69/175 (39.43%), Postives = 105/175 (60.00%), Query Frame = 1 Query: 7 GRLGELLSSFPLATLSIMIVCCVLQLSVWLLGVQVMDVALLPVSVLYYFQLYRLVSASFFHGNLMHIVFNMMTMSMFGVALERLFGTSRFVMLTMSFVLLHNILYLAVCYFL--SFFDESWMVYASVGFSGVLFGYAAIESLMSTQPTRSLFGVVNVPTKWYPWVLMVVLQVRVP 525 R E L+S PLATLSIM +CC + L + + + P VLY + YR++++S FHG+LMHI NMM+ G +LE+ FGT + + VLL +++Y+ + L F E M S+GFSGV+F + +E+ ++ +RS+FG++ V +K YPW L+VVLQ +P Sbjct: 2 SRASETLASIPLATLSIMALCCFVYLYQLAFDPTLHNFTMCPRLVLYMNEYYRIITSSLFHGSLMHIGMNMMSTMAIGTSLEKRFGTFTMALTVLWGVLLTSVIYMTTSWLLYVGFGYEKMMYQHSLGFSGVIFQLSVLEANLTPNRSRSVFGMIQVSSKMYPWCLLVVLQFIMP 176
BLAST of mRNA_M-pyrifera_M_contig100734.166.1 vs. uniprot
Match: A0A2P5B7Z7_PARAD (Peptidase n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5B7Z7_PARAD) HSP 1 Score: 114 bits (284), Expect = 8.750e-27 Identity = 66/173 (38.15%), Postives = 106/173 (61.27%), Query Frame = 1 Query: 10 RLGELLSSFPLATLSIMIVCCVLQLSVWLLGVQ-VMDVALLPVSVLYYFQLYRLVSASFFHGNLMHIVFNMMTMSMFGVALERLFGTSRF----VMLTMSFVLLHNILYLAVCYFLSFFDESWMVYASVGFSGVLFGYAAIESLMSTQPTRSLFGVVNVPTKWYPWVLMVVLQ 513 RLG+ S P T +++IVC ++ L+G +V LP +V+ +FQ+YR+ ++ FHG+L+H++FNMM + G LER+ G+ R ++L +S L H ++ L V Y + D+ M ++GFSG+LF IE+ +S +RS+FG+ NVP KWY W+L++V Q Sbjct: 14 RLGQWWESIPFLTSAVVIVCGMIYFVCLLVGYDSFFEVCFLPSAVVSHFQVYRVFTSILFHGSLLHVLFNMMALVPLGSELERIMGSVRLLFLIILLAISNALFHLLIALVVAYNPFYTDQYLMNECAIGFSGILFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLIVFQ 186
BLAST of mRNA_M-pyrifera_M_contig100734.166.1 vs. uniprot
Match: A0A835Z1X9_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1X9_9STRA) HSP 1 Score: 110 bits (275), Expect = 3.960e-26 Identity = 71/179 (39.66%), Postives = 105/179 (58.66%), Query Frame = 1 Query: 1 MAGRLGELLSSFPLATLSIMIVCCVLQLSVWLLGVQVMDVALLPVSVLYYFQLYRLVSASFFHGNLMHIVFNMMTMSMFGVALERLFGTSRFVMLTMSFVLLHNILYLAVCYFLSFFD-------ESWMVYASVGFSGVLFGYAAIESLMSTQPTRSLFGVVNVPTKWYPWVLMVVLQV 516 M+ RLGE L PL TL ++ +CC + L+++LL + +++ +VLY + YR+++A+F H ++MHI FNMM++ G LE GT M V+L LY A + F D ++ +VGFSGV+F A +E+ S++P R L G+V VPTK YPW LM+VLQV Sbjct: 1 MSSRLGEALGGVPLCTLCVVAMCCAVHLAIFLLDTPITMYSIMARNVLYLGEWYRIITAAFVHASMMHIGFNMMSLLAIGGGLESDLGTVAMTMTVWWSVILVGGLYCAGEWL--FADVRGGEHAREHLLQQAVGFSGVIFTLAVMEAQRSSEPYRMLMGMVKVPTKLYPWALMIVLQV 177
BLAST of mRNA_M-pyrifera_M_contig100734.166.1 vs. uniprot
Match: A0A2I0IG02_PUNGR (Rhomboid domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0IG02_PUNGR) HSP 1 Score: 105 bits (263), Expect = 2.690e-25 Identity = 59/174 (33.91%), Postives = 106/174 (60.92%), Query Frame = 1 Query: 10 RLGELLSSFPLATLSIMIVCCVLQLSVWLLGVQVMD-VALLPVSVLYYFQLYRLVSASFFHGNLMHIVFNMMTMSMFGVALERLFGTSRFVMLTMSFVLLHNILYLAVCYFLS---FFDESWMVY-ASVGFSGVLFGYAAIESLMSTQPTRSLFGVVNVPTKWYPWVLMVVLQV 516 R+ + P T +I+I+C V+ L L G + + P++V++ FQ+YR+ ++ FHG+L+H++FNM+ + G LERL G+ R + + + + + L+L + + ++ F +++ ++GFSG+LF IE+ +S +RS+FG+ NVP KWYPW+L+V+ QV Sbjct: 14 RVSQWWEGIPFLTSAIVIICGVIYLVCLLTGYDSFEEICFWPLAVIHKFQVYRIYTSVIFHGSLLHVMFNMLALVPLGSELERLMGSVRLLYIMILLAISNAFLHLLIAFLVAHNPFHPSQYLMNECAIGFSGILFSLIVIETSLSGAQSRSIFGLFNVPAKWYPWILLVIFQV 187
BLAST of mRNA_M-pyrifera_M_contig100734.166.1 vs. uniprot
Match: A0A6I9T451_SESIN (rhomboid-like protein 15 isoform X2 n=3 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9T451_SESIN) HSP 1 Score: 109 bits (273), Expect = 4.140e-25 Identity = 66/173 (38.15%), Postives = 104/173 (60.12%), Query Frame = 1 Query: 10 RLGELLSSFPLATLSIMIVCCVLQLSVWLLGVQ-VMDVALLPVSVLYYFQLYRLVSASFFHGNLMHIVFNMMTMSMFGVALERLFGTSRF----VMLTMSFVLLHNILYLAVCYFLSFFDESWMVYASVGFSGVLFGYAAIESLMSTQPTRSLFGVVNVPTKWYPWVLMVVLQ 513 R+ + P T +I+IVC ++ L +G ++V LP +V+ +FQ+YR +A FHG+L+H++FNM+ + G LER+ G+ R ++L S +LH ++ L V + D+S M S+GFSG+LF IE+ +S +RS+FG+ NVP KWY W+L+VV Q Sbjct: 14 RINQWWEGIPFVTSAIVIVCGIIYLVCLFVGYDSFVEVCFLPSAVVSHFQVYRAYTAIVFHGSLLHVLFNMLALVPMGSELERIMGSIRLFYITILLATSNAILHLLMALVVAHNPFSPDQSLMNQCSIGFSGILFSMIVIETSLSGAQSRSVFGLFNVPAKWYVWILLVVFQ 186
BLAST of mRNA_M-pyrifera_M_contig100734.166.1 vs. uniprot
Match: A0A7J6I4Z6_CANSA (UBA domain-containing protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6I4Z6_CANSA) HSP 1 Score: 109 bits (272), Expect = 4.390e-25 Identity = 66/173 (38.15%), Postives = 103/173 (59.54%), Query Frame = 1 Query: 10 RLGELLSSFPLATLSIMIVCCVLQLSVWLLGVQ-VMDVALLPVSVLYYFQLYRLVSASFFHGNLMHIVFNMMTMSMFGVALERLFGTSRF----VMLTMSFVLLHNILYLAVCYFLSFFDESWMVYASVGFSGVLFGYAAIESLMSTQPTRSLFGVVNVPTKWYPWVLMVVLQ 513 RLG+ S P+ T I+ VC ++ L L+G ++V LP +V +FQ+YR+ ++ FHG+++H++FNMM G LER+ G+ R ++L +S L H ++ L V Y D M ++GFSG+LF IE+ +S +RS+FG+ NVP KWY W+L++V Q Sbjct: 14 RLGQWWESIPVLTSGIVAVCGIIYLVCLLVGYDSFVEVCFLPSAVASHFQVYRIFTSVLFHGSILHVLFNMMAFVPLGSELERIMGSVRLLYLIILLAISNALFHLLIALLVMYNPIHSDGYLMNECAIGFSGILFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWILLIVFQ 186
BLAST of mRNA_M-pyrifera_M_contig100734.166.1 vs. uniprot
Match: A0A7N2M416_QUELO (UBA domain-containing protein n=5 Tax=Fagaceae TaxID=3503 RepID=A0A7N2M416_QUELO) HSP 1 Score: 108 bits (271), Expect = 6.310e-25 Identity = 62/178 (34.83%), Postives = 109/178 (61.24%), Query Frame = 1 Query: 10 RLGELLSSFPLATLSIMIVCCVLQLSVWLLGVQ-VMDVALLPVSVLYYFQLYRLVSASFFHGNLMHIVFNMMTMSMFGVALERLFGTSRF----VMLTMSFVLLHNILYLAVCY-----FLSFFDESWMVYASVGFSGVLFGYAAIESLMSTQPTRSLFGVVNVPTKWYPWVLMVVLQ 513 RLG+ PL T ++++VC ++ L L+G ++ LP ++L +FQ+YR+ ++ FFHG+L+H++FNM+ + G LER+ G+ R ++L + + H ++ L V + FL +E ++GFSG+LF IE+ +S +P RS+FG+ +VP +WYPW+L+++ Q Sbjct: 14 RLGQWWDGIPLLTSAVVVVCGIIYLVCLLVGYDSFFEICFLPSAILSHFQVYRIYTSIFFHGSLLHVLFNMLALVPLGSELERIMGSVRLLYMIILLATTNAIFHLLIALLVGHNPFHPFLYLMNE-----CAIGFSGILFSMIVIETSLSGEPRRSVFGLFHVPAQWYPWILLILFQ 186 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100734.166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100734.166.1 >prot_M-pyrifera_M_contig100734.166.1 ID=prot_M-pyrifera_M_contig100734.166.1|Name=mRNA_M-pyrifera_M_contig100734.166.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp MAGRLGELLSSFPLATLSIMIVCCVLQLSVWLLGVQVMDVALLPVSVLYYback to top mRNA from alignment at M-pyrifera_M_contig100734:53..577- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100734.166.1 ID=mRNA_M-pyrifera_M_contig100734.166.1|Name=mRNA_M-pyrifera_M_contig100734.166.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig100734:53..577- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100734:53..577- >mRNA_M-pyrifera_M_contig100734.166.1 ID=mRNA_M-pyrifera_M_contig100734.166.1|Name=mRNA_M-pyrifera_M_contig100734.166.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig100734:53..577- (Macrocystis pyrifera P11B4 male)back to top |