mRNA_M-pyrifera_M_contig100731.164.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100731.164.1
Unique NamemRNA_M-pyrifera_M_contig100731.164.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig100731.164.1 vs. uniprot
Match: A0A7S3Z7A3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z7A3_9EUKA)

HSP 1 Score: 65.9 bits (159), Expect = 9.710e-11
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 1 
Query:   49 GGFDV--EALYDYVGHEEHLLSFKKGDKIAVKEVNETGWWTGELNGKQGPFPSNYV 210
            GGF    EAL+DY    E  LSFK G+K+A+ E +++GWWTGE NG  G FP NYV
Sbjct:  327 GGFTEMGEALWDYNSGNEKDLSFKVGNKVAILEKDDSGWWTGEFNGTVGFFPGNYV 382
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BLAST of mRNA_M-pyrifera_M_contig100731.164.1 vs. uniprot
Match: D8M947_BLAHO (SH3 domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M947_BLAHO)

HSP 1 Score: 65.1 bits (157), Expect = 1.700e-10
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 1 
Query:   52 GFDVEALYDYVGHEEHLLSFKKGDKIAVKEVNETGWWTGELNGKQGPFPSNYVSRL 219
            G     LYD+ G +   L  ++G K+ V   +E+GWWTGE+NGK G FP+NYV  L
Sbjct:  345 GIMARVLYDFAGEDADELPLREGQKVRVTRQHESGWWTGEINGKVGMFPANYVELL 400
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BLAST of mRNA_M-pyrifera_M_contig100731.164.1 vs. uniprot
Match: A0A3P8WQR6_CYNSE (Intersectin 1 n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8WQR6_CYNSE)

HSP 1 Score: 65.1 bits (157), Expect = 1.840e-10
Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 1 
Query:   34 KLAQEGGFDVEALYDYVGHEEHLLSFKKGDKIAVKEVNETGWWTGELNGKQGPFPSNYVSRLVD 225
            KLA      V  +YDYV   +  L+F+KG  I V   ++  WW GELNG++G FPSNYV    D
Sbjct: 1052 KLAPAAVCQVIGMYDYVAQNDDELAFQKGQVITVLNKDDCDWWKGELNGREGLFPSNYVKLTTD 1115
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BLAST of mRNA_M-pyrifera_M_contig100731.164.1 vs. uniprot
Match: UPI00094E9BAC (rho guanine nucleotide exchange factor 6-like n=1 Tax=Hippocampus comes TaxID=109280 RepID=UPI00094E9BAC)

HSP 1 Score: 60.8 bits (146), Expect = 2.360e-10
Identity = 29/66 (43.94%), Postives = 37/66 (56.06%), Query Frame = 1 
Query:   22 VASNKLAQEGGFDVEALYDYVGHEEHLLSFKKGDKIAVKEVNETGWWTGELNGKQGPFPSNYVSRL 219
            ++ N     G   V+A +++  + E  LSF KGD I V    E GWW G LNGK G FPSNYV  +
Sbjct:    1 MSENGSNNSGQLMVKARFNFKQNNEDELSFTKGDVIIVTRQEEGGWWEGNLNGKTGWFPSNYVREV 66
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BLAST of mRNA_M-pyrifera_M_contig100731.164.1 vs. uniprot
Match: A0A8C6M8R2_NOTFU (Intersectin 1 (SH3 domain protein) n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6M8R2_NOTFU)

HSP 1 Score: 64.7 bits (156), Expect = 2.520e-10
Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 1 
Query:   34 KLAQEGGFDVEALYDYVGHEEHLLSFKKGDKIAVKEVNETGWWTGELNGKQGPFPSNYVSRLVD 225
            KLA      V  +YDYV   +  L+F+KG  I V   ++  WW GELNG++G FPSNYV    D
Sbjct: 1032 KLAPASLCQVIGMYDYVAQNDDELAFQKGQVITVLNKDDCDWWKGELNGREGLFPSNYVKLTTD 1095
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BLAST of mRNA_M-pyrifera_M_contig100731.164.1 vs. uniprot
Match: A0A8C6MC04_NOTFU (Intersectin 1 (SH3 domain protein) n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6MC04_NOTFU)

HSP 1 Score: 64.7 bits (156), Expect = 2.520e-10
Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 1 
Query:   34 KLAQEGGFDVEALYDYVGHEEHLLSFKKGDKIAVKEVNETGWWTGELNGKQGPFPSNYVSRLVD 225
            KLA      V  +YDYV   +  L+F+KG  I V   ++  WW GELNG++G FPSNYV    D
Sbjct: 1081 KLAPASLCQVIGMYDYVAQNDDELAFQKGQVITVLNKDDCDWWKGELNGREGLFPSNYVKLTTD 1144
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BLAST of mRNA_M-pyrifera_M_contig100731.164.1 vs. uniprot
Match: A0A8C6NW32_NOTFU (Intersectin 1 (SH3 domain protein) n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6NW32_NOTFU)

HSP 1 Score: 64.7 bits (156), Expect = 2.520e-10
Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 1 
Query:   34 KLAQEGGFDVEALYDYVGHEEHLLSFKKGDKIAVKEVNETGWWTGELNGKQGPFPSNYVSRLVD 225
            KLA      V  +YDYV   +  L+F+KG  I V   ++  WW GELNG++G FPSNYV    D
Sbjct: 1103 KLAPASLCQVIGMYDYVAQNDDELAFQKGQVITVLNKDDCDWWKGELNGREGLFPSNYVKLTTD 1166
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BLAST of mRNA_M-pyrifera_M_contig100731.164.1 vs. uniprot
Match: A0A0L0H8K5_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H8K5_SPIPD)

HSP 1 Score: 64.3 bits (155), Expect = 3.370e-10
Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 1 
Query:   61 VEALYDYVGHEEHLLSFKKGDKIAVKEVNETGWWTGELNGKQGPFPSNYVSRL 219
            V+ALYDY   E   +SF+ GD I V +  +  WW GELNG+ G FP+NYV ++
Sbjct:  721 VKALYDYTASEPDEISFRAGDIIRVTQSADADWWQGELNGRSGAFPANYVQKI 773
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BLAST of mRNA_M-pyrifera_M_contig100731.164.1 vs. uniprot
Match: A0A813IAS4_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IAS4_POLGL)

HSP 1 Score: 64.3 bits (155), Expect = 3.400e-10
Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 1 
Query:   19 DVASNKLAQEGGFDVEALYDYVGHEEHLLSFKKGDKIAV-KEVNETGWWTGELNGKQGPFPSNYVSRLVDGKA 234
            D A  KL  + G  V A+YDY   +   LSFK+GD I V  E  + GW+ GELNG+QG FP NYV  L + ++
Sbjct:  875 DWAQMKLEIQPGQRVMAVYDYSAQDGDELSFKEGDVITVLSEDIDPGWYLGELNGRQGVFPQNYVEPLQEAES 947
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BLAST of mRNA_M-pyrifera_M_contig100731.164.1 vs. uniprot
Match: A0A672HZB4_SALFA (Intersectin 1 (SH3 domain protein) n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672HZB4_SALFA)

HSP 1 Score: 64.3 bits (155), Expect = 3.430e-10
Identity = 28/64 (43.75%), Postives = 37/64 (57.81%), Query Frame = 1 
Query:   34 KLAQEGGFDVEALYDYVGHEEHLLSFKKGDKIAVKEVNETGWWTGELNGKQGPFPSNYVSRLVD 225
            K+A      V  +YDYV   +  L+F+KG  I V   ++  WW GELNG++G FPSNYV    D
Sbjct:  974 KMAAAAVCQVIGMYDYVAQNDDELAFQKGQVITVLNKDDCDWWKGELNGREGLFPSNYVKLTTD 1037
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100731.164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Z7A3_9EUKA9.710e-1155.36Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
D8M947_BLAHO1.700e-1046.43SH3 domain-containing protein n=1 Tax=Blastocystis... [more]
A0A3P8WQR6_CYNSE1.840e-1045.31Intersectin 1 n=1 Tax=Cynoglossus semilaevis TaxID... [more]
UPI00094E9BAC2.360e-1043.94rho guanine nucleotide exchange factor 6-like n=1 ... [more]
A0A8C6M8R2_NOTFU2.520e-1045.31Intersectin 1 (SH3 domain protein) n=1 Tax=Nothobr... [more]
A0A8C6MC04_NOTFU2.520e-1045.31Intersectin 1 (SH3 domain protein) n=1 Tax=Nothobr... [more]
A0A8C6NW32_NOTFU2.520e-1045.31Intersectin 1 (SH3 domain protein) n=1 Tax=Nothobr... [more]
A0A0L0H8K5_SPIPD3.370e-1049.06Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A813IAS4_POLGL3.400e-1046.58Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A672HZB4_SALFA3.430e-1043.75Intersectin 1 (SH3 domain protein) n=1 Tax=Salaria... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100731contigM-pyrifera_M_contig100731:307..546 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score71.6
Seed ortholog evalue1.8e-10
Seed eggNOG ortholog72019.SARC_00928T0
Preferred nameITSN1
KEGG koko:K20045
Hectar predicted targeting categoryother localisation
GOsGO:0001558,GO:0001932,GO:0001934,GO:0002052,GO:0002791,GO:0002793,GO:0003674,GO:0005070,GO:0005085,GO:0005088,GO:0005089,GO:0005198,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005905,GO:0005938,GO:0006810,GO:0006897,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007186,GO:0007264,GO:0007275,GO:0007399,GO:0007416,GO:0007417,GO:0007420,GO:0007528,GO:0008021,GO:0008047,GO:0008104,GO:0008150,GO:0008284,GO:0008593,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010817,GO:0010941,GO:0010942,GO:0010975,GO:0010976,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0016192,GO:0017016,GO:0017048,GO:0019207,GO:0019209,GO:0019220,GO:0019222,GO:0019899,GO:0022008,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030027,GO:0030100,GO:0030133,GO:0030139,GO:0030154,GO:0030234,GO:0030307,GO:0030424,GO:0030425,GO:0030674,GO:0031252,GO:0031267,GO:0031323,GO:0031325,GO:0031344,GO:0031346,GO:0031399,GO:0031401,GO:0031410,GO:0031982,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032879,GO:0032947,GO:0033036,GO:0033267,GO:0033674,GO:0035556,GO:0035591,GO:0036062,GO:0036465,GO:0036477,GO:0040007,GO:0040008,GO:0042127,GO:0042325,GO:0042327,GO:0042734,GO:0042981,GO:0042995,GO:0043005,GO:0043025,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043167,GO:0043169,GO:0043195,GO:0043197,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043523,GO:0043524,GO:0043549,GO:0043679,GO:0044085,GO:0044093,GO:0044297,GO:0044306,GO:0044309,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045177,GO:0045179,GO:0045202,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045746,GO:0045807,GO:0045859,GO:0045860,GO:0045927,GO:0045937,GO:0046872,GO:0046883,GO:0046887,GO:0048013,GO:0048488,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0048638,GO:0048639,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050773,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050808,GO:0050896,GO:0051020,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051056,GO:0051094,GO:0051124,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051641,GO:0051649,GO:0051716,GO:0051896,GO:0051897,GO:0051960,GO:0051962,GO:0060090,GO:0060123,GO:0060124,GO:0060255,GO:0060284,GO:0060322,GO:0060341,GO:0060548,GO:0060627,GO:0060998,GO:0060999,GO:0061024,GO:0065007,GO:0065008,GO:0065009,GO:0070064,GO:0070382,GO:0071840,GO:0071944,GO:0072091,GO:0080090,GO:0090087,GO:0090276,GO:0090277,GO:0097060,GO:0097440,GO:0097447,GO:0097458,GO:0097708,GO:0098590,GO:0098657,GO:0098693,GO:0098772,GO:0098793,GO:0098794,GO:0099003,GO:0099503,GO:0099504,GO:0099568,GO:0099738,GO:0120025,GO:0120035,GO:0120038,GO:0150034,GO:1900006,GO:1900242,GO:1900244,GO:1901214,GO:1901215,GO:1902531,GO:1902533,GO:1902692,GO:1903421,GO:1903423,GO:1903530,GO:1903532,GO:1903859,GO:1903861,GO:2000026,GO:2000177,GO:2000179,GO:2000648,GO:2001286,GO:2001288
EggNOG free text desc.Intersectin 1 (SH3 domain protein)
EggNOG OGs38FEJ@33154,KOG1029@1,KOG1029@2759
COG Functional cat.T
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size240
Cds size240
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815504.6494405-CDS-M-pyrifera_M_contig100731:306..5461622815504.6494405-CDS-M-pyrifera_M_contig100731:306..546Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100731 307..546 -
1692277441.2973096-CDS-M-pyrifera_M_contig100731:306..5461692277441.2973096-CDS-M-pyrifera_M_contig100731:306..546Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100731 307..546 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100731.164.1prot_M-pyrifera_M_contig100731.164.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100731 307..546 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100731.164.1

>prot_M-pyrifera_M_contig100731.164.1 ID=prot_M-pyrifera_M_contig100731.164.1|Name=mRNA_M-pyrifera_M_contig100731.164.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=80bp
MNKIAADVASNKLAQEGGFDVEALYDYVGHEEHLLSFKKGDKIAVKEVNE
TGWWTGELNGKQGPFPSNYVSRLVDGKAE*
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mRNA from alignment at M-pyrifera_M_contig100731:307..546-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100731.164.1 ID=mRNA_M-pyrifera_M_contig100731.164.1|Name=mRNA_M-pyrifera_M_contig100731.164.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=240bp|location=Sequence derived from alignment at M-pyrifera_M_contig100731:307..546- (Macrocystis pyrifera P11B4 male)
ATGAACAAGATTGCCGCCGACGTGGCCTCCAACAAGCTGGCACAGGAGGG
TGGCTTCGACGTGGAAGCCCTCTACGACTACGTGGGCCACGAGGAGCATC
TGCTCTCTTTCAAGAAGGGCGACAAGATCGCAGTGAAGGAGGTCAACGAG
ACTGGTTGGTGGACAGGCGAGCTCAACGGCAAGCAAGGCCCCTTCCCGTC
CAACTACGTTTCCCGCCTTGTCGACGGCAAGGCCGAGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig100731:307..546-

>mRNA_M-pyrifera_M_contig100731.164.1 ID=mRNA_M-pyrifera_M_contig100731.164.1|Name=mRNA_M-pyrifera_M_contig100731.164.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig100731:307..546- (Macrocystis pyrifera P11B4 male)
ATGAACAAGATTGCCGCCGACGTGGCCTCCAACAAGCTGGCACAGGAGGG
TGGCTTCGACGTGGAAGCCCTCTACGACTACGTGGGCCACGAGGAGCATC
TGCTCTCTTTCAAGAAGGGCGACAAGATCGCAGTGAAGGAGGTCAACGAG
ACTGGTTGGTGGACAGGCGAGCTCAACGGCAAGCAAGGCCCCTTCCCGTC
CAACTACGTTTCCCGCCTTGTCGACGGCAAGGCCGAGTAGATGAACAAGA
TTGCCGCCGACGTGGCCTCCAACAAGCTGGCACAGGAGGGTGGCTTCGAC
GTGGAAGCCCTCTACGACTACGTGGGCCACGAGGAGCATCTGCTCTCTTT
CAAGAAGGGCGACAAGATCGCAGTGAAGGAGGTCAACGAGACTGGTTGGT
GGACAGGCGAGCTCAACGGCAAGCAAGGCCCCTTCCCGTCCAACTACGTT
TCCCGCCTTGTCGACGGCAAGGCCGAGTAG
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